Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_H12
(628 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10 |Schizo... 117 1e-27
SPAC1556.03 |azr1||serine/threonine protein phosphatase Azr1|Sch... 27 2.2
SPAC6F12.05c |tnr3||thiamine diphosphokinase Tnr3 |Schizosacchar... 27 2.9
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 26 3.9
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 5.1
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 26 5.1
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 26 5.1
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 25 9.0
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 25 9.0
>SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 117 bits (282), Expect = 1e-27
Identities = 65/177 (36%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Frame = +3
Query: 9 DEHPRPQTTLEGLKKLPPVFKKEGLVTXXXXXXXXXXXXXLVLASEEAAKNL--KPLARF 182
DE P+ + LK + VFK G VT LVL S K L KPLA+
Sbjct: 220 DEEPK-NLNEDKLKSVRAVFKSNGTVTAANASTLNDGASALVLMSAAKVKELGLKPLAKI 278
Query: 183 VGWSYVGVDPSIMGIGPVPAIENLLKVTNMTLNDIDLIEINVAFVAQTLSCAKALKLDMQ 362
+GW DP P AI LK + + +D EIN AF ++ K L LD +
Sbjct: 279 IGWGEAAQDPERFTTSPSLAIPKALKHAGIEASQVDYYEINEAFSVVAVANTKILGLDPE 338
Query: 363 KLNVNGGATALGHPLGASGSRITAHLVHELRRRGLKRAIGSACIGGGQGIAVMIEAV 533
++N+NGG A+GHPLG+SGSRI L + L ++ K + + C GGG +++IE V
Sbjct: 339 RVNINGGGVAMGHPLGSSGSRIICTLAYILAQKDAKIGVAAVCNGGGGASSIVIERV 395
>SPAC1556.03 |azr1||serine/threonine protein phosphatase
Azr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 288
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 186 GWSYVGVDPSIMGIGPVPAIENL 254
GW+ VG+DPSI G V I+ +
Sbjct: 73 GWANVGIDPSIFSWGLVREIKKV 95
>SPAC6F12.05c |tnr3||thiamine diphosphokinase Tnr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 26.6 bits (56), Expect = 2.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 619 WRHDV*FGRTDYDSTLLVTIYHKTVEPV 536
WRH+ FG D L T+Y K+ +PV
Sbjct: 92 WRHNNTFGIADQWRNELYTVYGKSKKPV 119
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -1
Query: 205 TPTYDQPTNRASGFRFLAASSLASTRAPAPSLIPDALPAVTRPS 74
TP D P++ + F L SS+ S +P S P ++ P+
Sbjct: 299 TPGIDAPSDLEAKFSDLGVSSVVSVTSPLQSCTNSPSPPLSSPA 342
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 5.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 376 TAEPRPWGTPSAPPGPV 426
+A P P G PSAPP P+
Sbjct: 1719 SAPPMPAGPPSAPPPPL 1735
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 25.8 bits (54), Expect = 5.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 193 DQPTNRASGFRFLAASSLASTRAPAPSLIPDALPAVTRPSFLKTG 59
+QP N + +S S A AP+ P A P + PSF + G
Sbjct: 4 NQPNNGEQDEQLAKQTSKLSMSAKAPTFTPKAAPFI--PSFQRPG 46
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 25.8 bits (54), Expect = 5.1
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -1
Query: 214 LGSTPTYDQPTNRASGFRFLAASSLASTRAPA--PSLIPDALPAVTRP 77
L P Y++ T +S + S +T AP+ P++I ALP+ P
Sbjct: 523 LDGLPRYEEATRPSSPTESVEIPSNTTTIAPSPVPTIIAPALPSTPAP 570
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.0 bits (52), Expect = 9.0
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 12/86 (13%)
Frame = -1
Query: 223 PMMLGSTPTYDQPTNRASGFRF-----LAASSLASTRAPAPSL--IPDALPAVTRP-SFL 68
P LGST T SGF F +A +T P+ S+ D+ PA + S
Sbjct: 207 PASLGSTNNASTSTTANSGFSFGKPATTSAPGSNTTVTPSSSITGTNDSKPAASNTGSAP 266
Query: 67 KTGGSFFRP----SSVVCGRGCSSTS 2
TG SF +P +S +G ++TS
Sbjct: 267 TTGFSFGKPAGQAASTATDKGTTTTS 292
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 25.0 bits (52), Expect = 9.0
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -1
Query: 160 FLAASSLASTRAPAPSLIPDALPAVT-RPSF 71
F+ SS+A++ +PS+IP + A+T R SF
Sbjct: 257 FMLLSSIAASLPLSPSIIPPLVSAITDRLSF 287
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,368,034
Number of Sequences: 5004
Number of extensions: 43396
Number of successful extensions: 134
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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