Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_H12
(628 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1230 - 35099942-35100018,35100138-35100221,35100367-351004... 148 3e-36
10_08_0258 + 16261454-16261540,16261636-16261712,16262734-162628... 142 2e-34
09_02_0075 + 3916373-3916400,3916760-3916858,3916943-3917116,391... 101 4e-22
01_01_0071 + 548255-548399,548478-548651,548787-548892,548992-54... 83 2e-16
04_04_1676 - 35302498-35302836,35302911-35302997,35303063-353032... 33 0.25
01_07_0117 + 41171919-41172395 31 0.57
07_03_0797 + 21575948-21576042,21576140-21576902,21577134-215773... 31 0.75
05_01_0595 + 5344721-5345249,5349183-5349264,5349813-5350507,535... 31 0.75
12_01_0719 - 6344651-6344809,6344872-6345286,6345967-6346133 29 2.3
09_01_0066 - 978018-978500,978588-979034,979113-979412,979521-97... 29 3.0
07_03_0627 - 20061951-20062391,20062912-20062960,20063386-200638... 29 3.0
09_04_0329 + 16726501-16726750,16726843-16726930,16727280-167273... 28 5.3
03_05_0992 + 29528126-29529931 28 5.3
03_05_0025 + 19938138-19938306,19938899-19939505,19939613-199397... 28 7.0
02_02_0030 - 6207784-6208154,6208286-6211310 28 7.0
12_02_0615 + 21242819-21243201,21244510-21244630,21244728-212448... 27 9.2
10_02_0006 + 4096094-4096987,4098937-4098951 27 9.2
06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866 27 9.2
06_01_0673 - 4908496-4908563,4908646-4908712,4908821-4908922,490... 27 9.2
04_04_0588 - 26412487-26413887 27 9.2
04_03_0761 + 19339944-19340311,19342544-19343084 27 9.2
03_06_0313 + 33073542-33074464,33074901-33075069 27 9.2
03_04_0155 - 17773121-17773576,17773744-17774322 27 9.2
02_01_0144 - 1038547-1039650 27 9.2
01_06_0301 + 28315919-28316987,28317059-28317743,28317751-28318246 27 9.2
01_01_0794 - 6184622-6185317 27 9.2
>02_05_1230 -
35099942-35100018,35100138-35100221,35100367-35100475,
35100564-35100687,35101157-35101253,35101375-35101507,
35101654-35101731,35101821-35101928,35102011-35102078,
35102181-35102279,35102379-35102505,35102623-35102707,
35103297-35103373,35103482-35103562
Length = 448
Score = 148 bits (359), Expect = 3e-36
Identities = 78/178 (43%), Positives = 104/178 (58%), Gaps = 4/178 (2%)
Frame = +3
Query: 6 VDEHPRPQTTLEGLKKLPPVFKKEGLVTXXXXXXXXXXXXXLVLASEEAA--KNLKPLAR 179
VD+ RP TT GL KL PVF+K+G T ++L + A K L L
Sbjct: 257 VDDGIRPGTTASGLAKLKPVFRKDGTTTAGNSSQVSDGAGAVLLMRRDVAMKKGLPILGV 316
Query: 180 FVGWSYVGVDPSIMGIGPVPAIENLLKVTNMTLNDIDLIEINVAFVAQTLSCAKALKLDM 359
F ++ VGVDP++MG+GP AI +K + + DIDL E+N AF +Q + C L LD
Sbjct: 317 FRSFAAVGVDPAVMGVGPAVAIPAAVKSAGLQIEDIDLFELNEAFASQFVYCCNKLGLDR 376
Query: 360 QKLNVNGGATALGHPLGASGSRITAHLVHELRRRGLKRAIG--SACIGGGQGIAVMIE 527
K+NVNGGA ALGHPLGA+G+R A L++E++RRG G + CIG G G A + E
Sbjct: 377 SKVNVNGGAIALGHPLGATGARCVATLLNEMKRRGRDCRFGVVTMCIGSGMGAAAVFE 434
>10_08_0258 +
16261454-16261540,16261636-16261712,16262734-16262818,
16262931-16263057,16263147-16263245,16263343-16263410,
16263514-16263621,16263727-16263804,16263921-16264053,
16264138-16264234,16264465-16264588,16264668-16264776,
16264899-16264982,16265071-16265180
Length = 461
Score = 142 bits (344), Expect = 2e-34
Identities = 76/177 (42%), Positives = 103/177 (58%), Gaps = 4/177 (2%)
Frame = +3
Query: 9 DEHPRPQTTLEGLKKLPPVFKKEGLVTXXXXXXXXXXXXXLVLASEEAA--KNLKPLARF 182
D+ RP T+L L KL P F K+G T ++L + A K L + F
Sbjct: 260 DDGIRPGTSLAVLSKLKPAFSKDGTTTAGNASQVSDGAGAVLLMRRDIAMQKGLPIVGVF 319
Query: 183 VGWSYVGVDPSIMGIGPVPAIENLLKVTNMTLNDIDLIEINVAFVAQTLSCAKALKLDMQ 362
++ VGVDP+IMG+GP AI +K + ++D+DL EIN AF +Q + C K L LD
Sbjct: 320 RSFAAVGVDPAIMGVGPAVAIPAAVKAAGLQIDDVDLFEINEAFASQYVYCCKKLGLDPA 379
Query: 363 KLNVNGGATALGHPLGASGSRITAHLVHELRRRGLKRAIG--SACIGGGQGIAVMIE 527
K+NVNGGA ALGHPLGA+G+R + L++E++RRG G S CIG G G A + E
Sbjct: 380 KVNVNGGAMALGHPLGATGARSVSTLLNEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436
>09_02_0075 +
3916373-3916400,3916760-3916858,3916943-3917116,
3917207-3917312,3917671-3917809,3918457-3918534,
3918863-3918928,3919213-3919298,3919939-3920038,
3920245-3920355,3920457-3920498,3920671-3920757,
3921013-3921102
Length = 401
Score = 101 bits (243), Expect = 4e-22
Identities = 61/164 (37%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
Frame = +3
Query: 45 LKKLPPVFKKEG-LVTXXXXXXXXXXXXXLVLASEEAAKNL--KPLARFVGWSYVGVDPS 215
LKKL P FK+ G VT LVL S + A+ L + +AR G++ P
Sbjct: 236 LKKLRPSFKENGGTVTAGNASSISDGAAALVLVSGQKAQELGLQVIARIKGFADAAQAPE 295
Query: 216 IMGIGPVPAIENLLKVTNMTLNDIDLIEINVAFVAQTLSCAKALKLDMQKLNVNGGATAL 395
+ P AI L + + +D EIN AF A L+ K L + +K+NV+GGA +L
Sbjct: 296 LFTTSPALAIPKALANAGLESSRVDYYEINEAFSAVALANQKLLGIPSEKINVHGGAVSL 355
Query: 396 GHPLGASGSRITAHLVHELRRRGLKRAIGSACIGGGQGIAVMIE 527
GHPLG SG+RI L+ LR +G K + C GGG A+++E
Sbjct: 356 GHPLGCSGARILVTLLGVLREKGGKIGVAGVCNGGGGASALVLE 399
>01_01_0071 +
548255-548399,548478-548651,548787-548892,548992-549130,
549216-549293,549395-549460,550061-550201,550417-550527,
550614-550655,550739-550825,551033-551118,551681-551684
Length = 392
Score = 83.0 bits (196), Expect = 2e-16
Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Frame = +3
Query: 129 LVLASEEAAKNL--KPLARFVGWSYVGVDPSIMGIGPVPAIENLLKVTNMTLNDIDLIEI 302
+VL S + AK+L + +AR G++ P + P AI + + + ID EI
Sbjct: 256 IVLVSGQKAKSLGLQVIARIRGYADAAQAPELFTTTPALAIPKAVSNAGLQTSQIDYYEI 315
Query: 303 NVAFVAQTLSCAKALKLDMQKLNVNGGATALGHPLGASGSRITAHLVHELRRRGLKRAIG 482
N AF L+ K L + KLN++GG +LGHP+G SG+RI L+ LR + K +
Sbjct: 316 NEAFSVVALANQKLLGIPSGKLNLSGGGVSLGHPIGCSGARIIVTLLGILRHKNGKIGVA 375
Query: 483 SACIGGGQGIAVMIEAV 533
C GGG A+++E +
Sbjct: 376 GVCNGGGGASALVVELI 392
>04_04_1676 -
35302498-35302836,35302911-35302997,35303063-35303286,
35303375-35303675,35303762-35303860,35304895-35305032,
35305108-35305326
Length = 468
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -1
Query: 163 RFLAASSLASTRAPAPSLIPDALPAVTRPSFLKTGGSFFRPSSV 32
+ AAS A+ APAP + P + PA + + GS RP+S+
Sbjct: 375 KMAAASPPAAAPAPAPEMAPSSPPAEPPETATEAAGSAVRPASI 418
>01_07_0117 + 41171919-41172395
Length = 158
Score = 31.5 bits (68), Expect = 0.57
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -1
Query: 214 LGSTPTYDQ-PTNRASGFRFLAASSLASTRAPAPSLIPDALPAVTRPSFLKTGGSFFRPS 38
+ + P Y + PT G AA + A+ PAP+L PD +P + P + GS PS
Sbjct: 34 ISAAPEYPRLPTGPGHGGGRHAAPAPAAVLPPAPALSPDIMPLLPSPG-PDSDGSAEAPS 92
Query: 37 SVV 29
V+
Sbjct: 93 DVM 95
>07_03_0797 +
21575948-21576042,21576140-21576902,21577134-21577327,
21577667-21577700,21578421-21578485,21579032-21579524
Length = 547
Score = 31.1 bits (67), Expect = 0.75
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -1
Query: 274 VMLVTLRRFSMAGTGPMPMMLGSTPTYD-QPTNRASGFRFLAASSLASTRAPAPSLIPDA 98
V +TL+ F G+ P + L S P +P +R + A ++ A RAPA S A
Sbjct: 7 VTTMTLKDFH-GGSIPSELPLPSAPGVSARPADRPVASQAAAPAASARPRAPATSAAAAA 65
Query: 97 LPAVTRPSFL 68
A PSFL
Sbjct: 66 AAAAAVPSFL 75
>05_01_0595 +
5344721-5345249,5349183-5349264,5349813-5350507,
5350583-5350839,5350934-5351615,5351689-5351892,
5351981-5352715,5352799-5353181
Length = 1188
Score = 31.1 bits (67), Expect = 0.75
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 13/132 (9%)
Frame = -1
Query: 463 PRRLSSCTRCAVIRDPEAP-----RGCPKA------VAPPFTFSFCMSSFNALAQDRVCA 317
P R RC ++ D AP R C + A P C+SSF AL C+
Sbjct: 75 PCRHPHRVRCVILGDIHAPPRHPRRRCVRGHGRLRGQAAPRRRQACLSSFLALLVT-ACS 133
Query: 316 TNATLISIRSISLRVMLVTLRRFSMAGTGPMPMMLGSTPTYDQPTNRASGFRFLA-ASSL 140
T +++ I + L+T+ FS+ G G + G+ + + R G A A S
Sbjct: 134 TLKSMLYPPDIVVCAGLLTVLAFSVVGAGQAAGVAGARRAWWRAALRTEGATACARARSA 193
Query: 139 ASTRA-PAPSLI 107
AS A P P+ +
Sbjct: 194 ASAPARPVPARV 205
>12_01_0719 - 6344651-6344809,6344872-6345286,6345967-6346133
Length = 246
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = -1
Query: 265 VTLRRFSMAGTGPMPMMLGSTPTYDQPTNRASGFRFLAASSLASTRAPAPSLIPDALPA 89
V + R GT P P + STP P +G F A SL R P+L+ + PA
Sbjct: 65 VRITRLEKQGTDPSPPNIFSTPRIIVPVLTRNGL-FGCAPSLKRVRGILPNLMNISAPA 122
>09_01_0066 -
978018-978500,978588-979034,979113-979412,979521-979855,
980325-980703
Length = 647
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -1
Query: 202 PTYDQPTNRASGFRFLAASSLASTRA-PAPSLIPDALPAVTRPSFLKTGGSFFR 44
P PT S F + A L R P PS P A T+P+ TG + +R
Sbjct: 21 PRASTPTGPVSAFLVVDARILTDARRRPPPSPTPPARRRPTKPASPPTGAALYR 74
>07_03_0627 -
20061951-20062391,20062912-20062960,20063386-20063851,
20063933-20064139,20064267-20064405,20065146-20065282,
20065414-20065657,20065808-20065969,20066049-20066167,
20066240-20066314,20066327-20066500,20066607-20066769,
20067211-20067420,20067515-20067668,20067761-20067839,
20067999-20068146,20068501-20068671,20068771-20069385
Length = 1250
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -3
Query: 368 QLLHVQLQRFSAGQGLRHERHVDLNKVDIVEGHVGDLEKVL 246
Q+L V+L R + L + H+D NK+ ++ VGDL+K++
Sbjct: 262 QMLPVELTRLA----LLEKLHLDNNKLSVLPPEVGDLKKLI 298
>09_04_0329 +
16726501-16726750,16726843-16726930,16727280-16727333,
16727590-16727739,16727884-16728015,16728279-16728423,
16728514-16728552,16728638-16728712,16728935-16728994,
16729120-16729184,16729519-16729609,16729806-16729820
Length = 387
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -1
Query: 175 ASGFRFLAASSLASTRAPAPSLIPDALPAVTRPSF 71
A F FLAA++ A++R+P P L P A PA F
Sbjct: 7 AKPFPFLAAAAAAASRSPLP-LSPAARPAPASSRF 40
>03_05_0992 + 29528126-29529931
Length = 601
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = -1
Query: 283 SLRVMLVTLRRFSMAGTGPMPMMLGSTPTYDQPTNRASGFRFLAASSLASTRAPAPSLIP 104
S R++ LRR A + +P+ P S LA S ++ AP+PSL+
Sbjct: 61 SPRLLDAVLRRCGAASALALHFFHWCSPSLPPPGPLPSSLALLAKSFSRASSAPSPSLLA 120
Query: 103 DALPAVTRPSFL 68
+ PS L
Sbjct: 121 PLPAQLLSPSLL 132
>03_05_0025 +
19938138-19938306,19938899-19939505,19939613-19939723,
19941891-19941972,19942033-19942080
Length = 338
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 469 FKPRRLSSCTRCAVIRDPEAPRGCPKAVAPPFTFSFCMSSF 347
+KPRR S R +R P G +VAPP + ++F
Sbjct: 159 YKPRRQLSTPRAPQMRQPIFYEGASLSVAPPHPHGYDPNTF 199
>02_02_0030 - 6207784-6208154,6208286-6211310
Length = 1131
Score = 27.9 bits (59), Expect = 7.0
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = -1
Query: 268 LVTLRRFSMAGTGPMPMMLGSTPTY---DQPTNRASGF--RFLA-ASSLASTRAPAPSLI 107
L TL S A G +P +LGS+P++ + N+ +G FLA +SSL R SL
Sbjct: 200 LKTLDLSSNALRGDIPPLLGSSPSFVYVNLGGNQLTGGIPEFLANSSSLQVLRLTQNSLT 259
Query: 106 PDALPAVTRPSFLKT 62
+ PA+ S L+T
Sbjct: 260 GEIPPALFNSSTLRT 274
>12_02_0615 +
21242819-21243201,21244510-21244630,21244728-21244847,
21245015-21245245,21245365-21245862
Length = 450
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -3
Query: 392 GRGSAVHVQLLHVQLQRFSAGQGLRHERHVDLNKVDIVEGHVGD 261
G+G++V LLH+Q +R A GL+ E +N + E HV D
Sbjct: 145 GKGNSVPTILLHMQ-ERLYAQGGLKAEGIFRINPENDQEEHVRD 187
>10_02_0006 + 4096094-4096987,4098937-4098951
Length = 302
Score = 27.5 bits (58), Expect = 9.2
Identities = 27/101 (26%), Positives = 43/101 (42%)
Frame = -1
Query: 304 LISIRSISLRVMLVTLRRFSMAGTGPMPMMLGSTPTYDQPTNRASGFRFLAASSLASTRA 125
L ++ S+ L +L RR G P+P++ DQP +G + L S R
Sbjct: 12 LAALLSVYLLDLLAHSRRLLPPGPRPLPLIGSLHLLGDQPHRSLAGLAKM-YGPLMSLRL 70
Query: 124 PAPSLIPDALPAVTRPSFLKTGGSFFRPSSVVCGRGCSSTS 2
A + + + P V R FL+ + F SV G +T+
Sbjct: 71 GAVTTVVVSSPDVAR-EFLQRHNAAFASRSVPDATGDHATN 110
>06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866
Length = 785
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +3
Query: 306 VAFVAQTLSCAKALKLDMQKLNVNGGATALGHPLGASGSRITAHLVHELRRRGLKRAIGS 485
+ FVA L C A D+ + T+L HP AS ++ E R++GL A S
Sbjct: 65 LGFVAAPL-CRGASVQDVLCRLMIAAVTSLSHPSTASSAKFDGRRSEERRKKGLIVAAAS 123
Query: 486 ACI 494
+ +
Sbjct: 124 SAL 126
>06_01_0673 -
4908496-4908563,4908646-4908712,4908821-4908922,
4909006-4909119,4909510-4909683,4909769-4910200,
4910855-4911295
Length = 465
Score = 27.5 bits (58), Expect = 9.2
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Frame = +3
Query: 129 LVLAS-EEAAKNLKPL-ARFVGWS-----YVGVDPSIMGIGPVPAIENLLKVTNMTLNDI 287
LV+ S E A K P+ A ++G + Y DP G+G I+ L + ++
Sbjct: 291 LVMESLEHAMKRDAPIIAEYLGGAVNCDAYHMTDPRSDGLGVSSCIKQSLADAGVAPEEV 350
Query: 288 DLIEINV-AFVAQTLSCAKALKL---DMQKLNVNGGATALGHPLGASG 419
+ I + + +A L+ A++ D ++ +N + +GH LGA+G
Sbjct: 351 NYINAHATSTLAGDLAEVNAIRQVFKDPSEIKINATKSMIGHCLGAAG 398
>04_04_0588 - 26412487-26413887
Length = 466
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 412 PPGPVSRRTSCTSSDAAA 465
PP P SR+ C+ DAAA
Sbjct: 339 PPAPTSRQEGCSGGDAAA 356
>04_03_0761 + 19339944-19340311,19342544-19343084
Length = 302
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 190 QPTNRASGFRFLAASSLASTRAPAPSLIPDALPA 89
QPT + GF F + A+ AP+P +P A A
Sbjct: 3 QPTQQQRGFGFSGVGAAAAAAAPSPRGMPMAAGA 36
>03_06_0313 + 33073542-33074464,33074901-33075069
Length = 363
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = -1
Query: 460 RRLSSCTRCAVIRDPEAPR-GCPK----AVAPPFTFSFCMSSFNALAQD 329
++ SSC R A D + CPK +++PPF FC LA D
Sbjct: 250 KKPSSCARKATADDDAGGKCHCPKKKSVSISPPFLGHFCHDLDRVLASD 298
>03_04_0155 - 17773121-17773576,17773744-17774322
Length = 344
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +3
Query: 378 GGATAL----GHPLGASGSRITAHLVHELRRRGLKRAIGSACIGGGQGIA 515
GGA A G LG SG L+H R +G + G G G G+A
Sbjct: 50 GGAAAAVRQGGRVLGRSGGEEDRLLLHGRRTKGRRHRSGKGRSGAGVGLA 99
>02_01_0144 - 1038547-1039650
Length = 367
Score = 27.5 bits (58), Expect = 9.2
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 385 PRPWGTPSAPPGPVSRRTSCTSSD-AAA*NEL*DQLVSEGVRVSLS*SKLFKLAPQSCGI 561
P P T +APP PV +R T+SD AAA D V V ++ S ++ L P S +
Sbjct: 51 PAP-ATAAAPP-PVEKRPIKTASDLAAAIRAAADADVDAAVDLARSAARTIPLPPHSLSL 108
Query: 562 WLPIMYYH 585
L + H
Sbjct: 109 LLRRLARH 116
>01_06_0301 + 28315919-28316987,28317059-28317743,28317751-28318246
Length = 749
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 416 RVPYHGAPRARAQTPRLETSYRISLYRRG 502
R Y GA ARA TP++ +Y L RG
Sbjct: 488 RAAYEGAMAARAATPQMVINYASFLEERG 516
>01_01_0794 - 6184622-6185317
Length = 231
Score = 27.5 bits (58), Expect = 9.2
Identities = 26/126 (20%), Positives = 47/126 (37%)
Frame = -1
Query: 403 GCPKAVAPPFTFSFCMSSFNALAQDRVCATNATLISIRSISLRVMLVTLRRFSMAGTGPM 224
GC F S ++ + R C + + + + +ISL +LV + M
Sbjct: 25 GCLPVDQSCFALSRLSYRRSSSSNPRACCSTTSYLEVLAISLASLLVIVLVLCAIRCYRM 84
Query: 223 PMMLGSTPTYDQPTNRASGFRFLAASSLASTRAPAPSLIPDALPAVTRPSFLKTGGSFFR 44
+ A+ AA ++ + + PAP L DA+ A+ + + TG R
Sbjct: 85 RRAVNRVTVAAASAAAAAA----AAGNVTNKKRPAPGLGEDAIAALPKFEYRGTGDECDR 140
Query: 43 PSSVVC 26
+C
Sbjct: 141 WECSIC 146
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,113,513
Number of Sequences: 37544
Number of extensions: 405652
Number of successful extensions: 1758
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1754
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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