Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_H12
(628 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30177| Best HMM Match : No HMM Matches (HMM E-Value=.) 162 2e-40
SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 2e-21
SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35) 56 2e-08
SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_12464| Best HMM Match : Nsp1_C (HMM E-Value=0) 32 0.33
SB_13186| Best HMM Match : Nsp1_C (HMM E-Value=6.8e-07) 32 0.33
SB_50648| Best HMM Match : Atrophin-1 (HMM E-Value=1.3) 31 0.58
SB_10933| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_19024| Best HMM Match : Thiolase_C (HMM E-Value=5.4e-36) 31 1.0
SB_1573| Best HMM Match : Thiolase_C (HMM E-Value=1.6e-40) 31 1.0
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 30 1.3
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 30 1.3
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 29 2.3
SB_12155| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_39408| Best HMM Match : Cadherin (HMM E-Value=0) 29 2.3
SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94) 28 7.1
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 27 9.4
SB_9675| Best HMM Match : Notch (HMM E-Value=0.27) 27 9.4
>SB_30177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 643
Score = 162 bits (393), Expect = 2e-40
Identities = 80/128 (62%), Positives = 98/128 (76%), Gaps = 2/128 (1%)
Frame = +3
Query: 129 LVLASEEAAKN--LKPLARFVGWSYVGVDPSIMGIGPVPAIENLLKVTNMTLNDIDLIEI 302
LVLASE+A K+ L PLAR V +S GVDP+IMGIGPVP+I+ L+ TL+D+D+IE+
Sbjct: 25 LVLASEKAVKDHGLTPLARLVSYSINGVDPAIMGIGPVPSIKCALERAGKTLDDMDIIEV 84
Query: 303 NVAFVAQTLSCAKALKLDMQKLNVNGGATALGHPLGASGSRITAHLVHELRRRGLKRAIG 482
N AF Q L+ K L LDM K NVNGGA ALGHP+G SG+R+T HL HE+ R+GLK +IG
Sbjct: 85 NEAFAPQFLAVQKDLGLDMSKTNVNGGAIALGHPVGTSGARLTVHLTHEMMRKGLKYSIG 144
Query: 483 SACIGGGQ 506
SACIGGGQ
Sbjct: 145 SACIGGGQ 152
>SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 99.5 bits (237), Expect = 2e-21
Identities = 56/138 (40%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
Frame = +3
Query: 9 DEHPRPQTTLEGLKKLPP--VFKKEGLVTXXXXXXXXXXXXXLVLA--SEEAAKNLKPLA 176
D+ PR T+EGL+KL P +F +G V+ +VL +E A+N+ PLA
Sbjct: 221 DQFPRHGCTIEGLRKLKPCFLFDGKGTVSAGNTSGLNDGAAVVVLMPYAEANARNVSPLA 280
Query: 177 RFVGWSYVGVDPSIMGIGPVPAIENLLKVTNMTLNDIDLIEINVAFVAQTLSCAKALKLD 356
R V W+ GVDPS+MG GP+PA L + D+DL E+N AF AQ+ + + L LD
Sbjct: 281 RVVSWAQAGVDPSVMGTGPIPATRKALSKAGWKVEDVDLFELNEAFAAQSCAVIRELGLD 340
Query: 357 MQKLNVNGGATALGHPLG 410
K NV T L H LG
Sbjct: 341 PSK-NVVDCETRLDHALG 357
>SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35)
Length = 415
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Frame = +3
Query: 3 EVDEHPRPQTTLEGLKKLPPVFKKE-GLVTXXXXXXXXXXXXXLVLASEEAA-KN-LKPL 173
E DE + + + E L VFKKE G VT +VL + EAA KN + PL
Sbjct: 117 EEDEEYK-KVSFEKFPSLKTVFKKENGTVTAANASTLNDGAAAVVLMTREAAEKNGVTPL 175
Query: 174 ARFVGWSYVGVDPSIMGIGPVPAIENLLKVTNMTLNDIDLIEINVAFVAQTLS 332
A V ++ V P I P AI +L++ ++ +DID+ EIN AF A L+
Sbjct: 176 ASIVAFADAAVAPIDFPIAPAAAIPKVLRLAHLRKDDIDMWEINEAFSAVALA 228
>SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 47.6 bits (108), Expect = 8e-06
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 6 VDEHPRPQTTLEGLKKLPPVFKKEGLVTXXXXXXXXXXXXXLVLASEEAAKNLK--PLAR 179
VDEHPRP+TT+E L KLP VFKK G V+ + + A+ +K L R
Sbjct: 877 VDEHPRPETTIEQLAKLPAVFKKNGTVSAGNASIEQKPKHVFIPFTRLPARGIKRSELVR 936
Query: 180 FVGWSYV 200
V S+V
Sbjct: 937 AVNSSHV 943
>SB_12464| Best HMM Match : Nsp1_C (HMM E-Value=0)
Length = 467
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -1
Query: 250 FSMAGTGPMPMMLGSTPTYDQPTNRASGFRFLAASSLASTRAPA-PSLIPDALPAVT 83
FS+ GT GST T T +GF L A S AST A A P+ + P +T
Sbjct: 231 FSLGGTALGSTAPGSTITAPASTGITTGFGSLTAKSTASTVASAVPTALTSTAPQLT 287
>SB_13186| Best HMM Match : Nsp1_C (HMM E-Value=6.8e-07)
Length = 329
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -1
Query: 250 FSMAGTGPMPMMLGSTPTYDQPTNRASGFRFLAASSLASTRAPA-PSLIPDALPAVT 83
FS+ GT GST T T +GF L A S AST A A P+ + P +T
Sbjct: 231 FSLGGTALGSTAPGSTITAPASTGITTGFGSLTAKSTASTVASAVPTALTSTAPQLT 287
>SB_50648| Best HMM Match : Atrophin-1 (HMM E-Value=1.3)
Length = 1281
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = -1
Query: 157 LAASSLASTRAPAPSLIPDALPAVTRPSF-LKTGGSFFRPSSV-VCGRGCSSTS 2
L+ +SL + +P P+ P +PAVTR + TG S S + V G+ ++TS
Sbjct: 828 LSTASLPTETSPLPASCPSTVPAVTRVTMCTNTGASLMLSSPIRVNGKKSAATS 881
>SB_10933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 395 GAPPRRLRVPYHGAPRARAQTP-RLETSYRISLYRRGS 505
GA P R PYHG+ R TP R YR S RGS
Sbjct: 379 GATPYRRSTPYHGSTPYRGSTPYRGSIPYRGSTPYRGS 416
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 395 GAPPRRLRVPYHGAPRARAQTP-RLETSYRISLYRRGS 505
GA P R P+HGA R TP T YR S RGS
Sbjct: 367 GATPYRGASPHHGATPYRRSTPYHGSTPYRGSTPYRGS 404
>SB_19024| Best HMM Match : Thiolase_C (HMM E-Value=5.4e-36)
Length = 330
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 366 LNVNGGATALGHPLGASGSRITAHLVHELRRRGLKRAIGSA 488
+N +GG + GHPLGA+G L +LR KR + A
Sbjct: 86 VNPSGGLISKGHPLGATGLAQCTELTLQLRGACGKRQVPGA 126
>SB_1573| Best HMM Match : Thiolase_C (HMM E-Value=1.6e-40)
Length = 331
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 366 LNVNGGATALGHPLGASGSRITAHLVHELRRRGLKRAIGSA 488
+N +GG + GHPLGA+G L +LR KR + A
Sbjct: 231 VNPSGGLISKGHPLGATGLAQCTELTLQLRGACGKRQVPGA 271
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/99 (23%), Positives = 40/99 (40%)
Frame = -1
Query: 319 ATNATLISIRSISLRVMLVTLRRFSMAGTGPMPMMLGSTPTYDQPTNRASGFRFLAASSL 140
A AT ++ ++ T + S + T P +P + ++ A
Sbjct: 1585 AVTATAVATTGAAVAAASATTKGKSPSKTSATKATHAKNPKSAKPGSSSTKPGTSAKPGA 1644
Query: 139 ASTRAPAPSLIPDALPAVTRPSFLKTGGSFFRPSSVVCG 23
A+ + A S P+A+PA T + K+G S +P S G
Sbjct: 1645 ATAKPGAASAKPEAVPAKTGAASTKSGPSAAKPGSTKSG 1683
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/105 (21%), Positives = 43/105 (40%)
Frame = -1
Query: 319 ATNATLISIRSISLRVMLVTLRRFSMAGTGPMPMMLGSTPTYDQPTNRASGFRFLAASSL 140
A AT ++ ++ T + S + T P +P + ++ A
Sbjct: 480 AVTATAVATTGAAVAAASATTKGKSPSKTSATKATHAKNPKSAKPGSSSTKPGTSAKPGA 539
Query: 139 ASTRAPAPSLIPDALPAVTRPSFLKTGGSFFRPSSVVCGRGCSST 5
A+ + A S P+A+PA T + K+G S +P S + ++T
Sbjct: 540 ATAKPGAASAKPEAVPAKTGAASTKSGPSAAKPGSTKSAKSQANT 584
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -1
Query: 262 TLRRFSMAGTGPMPMMLGSTPTYDQPTNRASGFRFLAASSLASTRAP 122
T S A + P + G+TP ASGF F AA ++ P
Sbjct: 2297 TAAAVSTASSAPSAFVFGATPVVTSTPAAASGFSFTAAGGSSTVPKP 2343
>SB_12155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +3
Query: 240 AIENLLKVTNMTLNDIDLIEINVAFVAQTLSCAKALKL-----DMQKLN-VNGGATALGH 401
A + +V+ + D+D+ E++ F L +AL L Q ++ + GH
Sbjct: 153 AAADCYRVSGLQAQDVDVFEVHDCFSCNELFMYEALGLCGEGKGGQLIDEAKWHTNSAGH 212
Query: 402 PLGASGSRITAHLVHELRRRGLKRAIGSA 488
P+GA+G A L +LR KR + A
Sbjct: 213 PIGATGLAQCAELNWQLRGVAGKRQVEGA 241
>SB_39408| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2389
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 270 MTLNDIDLIEINVAFVAQTLSCAKALKLDMQKLNV 374
M+ ++ + V VAQT AKALK+D+ ++V
Sbjct: 1472 MSFQELQSLATKVVLVAQTQQMAKALKIDVLSIDV 1506
>SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 323 DPVLR*SVXXXXXXXXXXXXSHGLGAPPRRLRVPYHGAPRAR 448
DPV+R V S L PP +R P G PR R
Sbjct: 515 DPVIRRQVEKSKSHSGIERASTQLNPPPLPVRPPLGGTPRTR 556
>SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94)
Length = 450
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 398 APPRRLRVPYHGAPRARAQTP-RLETSYR 481
+P RR + P H +PR ++QTP R TS R
Sbjct: 384 SPRRRSQSPDHVSPRRKSQTPNRASTSTR 412
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 412 APRGCPKAVAPPFTFSFCMSSFNALAQDR 326
A RG K APP F C +++ + QDR
Sbjct: 136 AYRGKRKTEAPPHVFCICDNAYQNMLQDR 164
>SB_9675| Best HMM Match : Notch (HMM E-Value=0.27)
Length = 223
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = -1
Query: 208 STPTYDQPTNRASGFRFLAASSLASTRAPAPSLIPDALPAVTRPSFLKTGGSF 50
+TP+ S + +SS +T+ A D + +TRP+F G S+
Sbjct: 105 TTPSPSSTVTSMSSVTSIQSSSTTTTQVSASVTTSDTVICITRPAFAHYGDSW 157
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,194,556
Number of Sequences: 59808
Number of extensions: 384727
Number of successful extensions: 1217
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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