Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H12
         (628 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    26   0.35 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   1.8  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   3.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   5.6  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              21   7.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.4  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 85  TRPSFLKTGGSFFRPSSVVCG 23
           + PS  +TG S  R SS++CG
Sbjct: 336 SNPSITRTGLSSVRDSSIICG 356


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 247 SMAGTGPMPMMLGSTPTYDQPTNRASGFR 161
           +M+G  P+P M GS PT     + A   R
Sbjct: 425 NMSGMPPLPNMPGSMPTMPTMPSMAGPIR 453


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 575 CTIIVSTSKLHVMSPH 622
           CT+++ T KLH   PH
Sbjct: 438 CTVVIGTFKLH-RQPH 452


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 263 HQHDPQRYRPY 295
           HQH P +Y P+
Sbjct: 319 HQHHPSQYHPH 329


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +2

Query: 65  FQEGRSRHRRQCIG 106
           F+E  S++R++CIG
Sbjct: 32  FREMTSKYRKKCIG 45


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 15/66 (22%), Positives = 25/66 (37%)
 Frame = -1

Query: 313 NATLISIRSISLRVMLVTLRRFSMAGTGPMPMMLGSTPTYDQPTNRASGFRFLAASSLAS 134
           N    S  S S  V+  +L+ F++  +     M+ S   YD+          L  + +  
Sbjct: 245 NGKFFSRSSTSRIVISESLKHFTIQSSVTTSKMMVSPRLYDRQNGLVLSRMNLTLAKMEK 304

Query: 133 TRAPAP 116
           T  P P
Sbjct: 305 TSKPLP 310


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,815
Number of Sequences: 438
Number of extensions: 3275
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)