Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H11
         (463 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    25   0.45 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   0.79 
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   4.2  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    20   9.7  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 24.6 bits (51), Expect = 0.45
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 244 GRIGKGEIQDSAGQGSRKDSKEGLTQRVQGL 336
           G + KG++         KD K GL +R+Q L
Sbjct: 124 GWLKKGKLSSFESNDETKDGKVGLYERIQKL 154


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 0.79
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 343 GIPTLEPFGLTLLWNPSLNPGPRNPEFPPSQSSLA 239
           G+PTL P G+ L   P+L         PP  +++A
Sbjct: 114 GVPTLSPVGVAL--PPTLPAAAAAALLPPQTAAMA 146


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 400 GIPPLVTNHGPTMF 359
           G P ++++HGP M+
Sbjct: 148 GAPMMMSSHGPLMY 161


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 397 IPPLVTNHGPTMFRPL 350
           IP ++   GP  F+PL
Sbjct: 199 IPDVIKTSGPHKFQPL 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,297
Number of Sequences: 336
Number of extensions: 2236
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)