Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_H11
(463 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0121 - 1493822-1494316 32 0.26
02_02_0063 + 6481568-6481570,6481922-6482470 30 0.79
01_06_1463 + 37535360-37535617 29 1.8
03_06_0170 - 32128619-32129647 29 2.4
11_01_0800 - 7047425-7048253,7048340-7048927,7049050-7049268,704... 28 3.2
05_03_0635 - 16446805-16447716 28 3.2
05_03_0626 - 16335816-16335917,16336331-16336558,16336694-163369... 28 3.2
04_01_0363 + 4754650-4755912 28 3.2
02_03_0075 + 14846108-14847794,14847858-14848249 28 3.2
09_06_0087 + 20771329-20771450,20771462-20771771,20771893-207726... 28 4.2
01_07_0381 - 43186467-43187219 28 4.2
11_01_0034 + 254163-254251,254793-254892,255130-255231,255700-25... 27 5.6
08_02_0480 + 17632176-17632814,17633838-17633906 27 5.6
04_01_0282 - 3764110-3764666,3765117-3765180 27 5.6
02_01_0746 + 5554686-5556179 27 5.6
01_05_0298 + 20591470-20591892,20592696-20592892,20594446-20594707 27 5.6
04_03_0489 + 16503325-16503747,16503916-16503978 27 7.3
12_01_0874 + 8384332-8384657,8385447-8386044 27 9.7
05_02_0032 - 5842333-5842950 27 9.7
05_01_0566 - 4940743-4940980,4941418-4941564,4941655-4941854 27 9.7
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 27 9.7
04_03_0785 + 19619062-19619532,19620047-19621012 27 9.7
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 27 9.7
04_01_0601 + 7918220-7918559,7919082-7919158 27 9.7
03_05_0722 + 27139790-27140035,27140176-27140217 27 9.7
01_04_0124 + 16359695-16359734,16360217-16360453,16361133-163621... 27 9.7
>10_01_0121 - 1493822-1494316
Length = 164
Score = 31.9 bits (69), Expect = 0.26
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Frame = +1
Query: 151 SGSGRIWRW*SGIWTRSG-RI-WWR*SGIRTWPGRIGKGEI--QDSAGQGSRKDSKEGLT 318
SG G WRW + +I WW P R+G G + Q +G G + S T
Sbjct: 80 SGKGEGWRWGHRLCPAPNTKIQWWGDKPSAVAPTRVGLGRVPAQGGSGSGFARASARAPT 139
Query: 319 QRVQGLGFRFQ-VGGTWW 369
+ GF Q + WW
Sbjct: 140 RPGSSGGFNSQWLNKLWW 157
>02_02_0063 + 6481568-6481570,6481922-6482470
Length = 183
Score = 30.3 bits (65), Expect = 0.79
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 249 DWEGGNSGFRGPGFKE-GFQRRV-NPKGSRVGIPVSSGRNMVGPWLVTNGG 395
D +GG+ G R G + GF +P G +P G+ M PW+ G
Sbjct: 82 DGDGGSGGDRRSGGRALGFGTPTPDPTGGGTSVPAQPGKRMAQPWVTVATG 132
>01_06_1463 + 37535360-37535617
Length = 85
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 252 WEGGNSGFRGPGFKEGFQRRVNPKGSRVGIPVSSGRNMVGPW-LVTNGGIPKHA 410
WEG G G QR P G R G +S M PW + GG+P+ A
Sbjct: 30 WEGSAGGTGG-------QRPGGPHGRRRGRRISRAARMATPWAAIGAGGLPRTA 76
>03_06_0170 - 32128619-32129647
Length = 342
Score = 28.7 bits (61), Expect = 2.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 416 VSRVLWYPAVGDQPWTHH 363
++ V+WY +GD WT H
Sbjct: 113 IATVIWYCRIGDDEWTRH 130
>11_01_0800 -
7047425-7048253,7048340-7048927,7049050-7049268,
7049398-7049518,7050593-7050983
Length = 715
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 229 IRTWPGRIGKGEIQDSAGQGSRKDSKEGLTQRVQGLGF 342
+R +PG+ +GE Q + G G +K S T R Q GF
Sbjct: 35 VRAFPGQKEEGEKQPARG-GGKKSSSSSSTFRAQVRGF 71
>05_03_0635 - 16446805-16447716
Length = 303
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/51 (25%), Positives = 21/51 (41%)
Frame = -1
Query: 385 VTNHGPTMFRPLETGIPTLEPFGLTLLWNPSLNPGPRNPEFPPSQSSLAMS 233
V HGP + + +P L W L+PG F P + +L ++
Sbjct: 35 VARHGPRNWTAISEEVPGRSGKSCRLRWCNQLSPGVHRRPFTPDEDALIVA 85
>05_03_0626 -
16335816-16335917,16336331-16336558,16336694-16336973,
16337596-16338560
Length = 524
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 411 PRALVSRRW*PTMDPPCSAHLKPESQPLNP 322
PR L+ R W P P CS L P S P P
Sbjct: 114 PRGLLVR-WAPPPAPRCSTPLSPYSPPFRP 142
>04_01_0363 + 4754650-4755912
Length = 420
Score = 28.3 bits (60), Expect = 3.2
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +1
Query: 181 SGIWTRSGRIWWR*----SGIRTWPGRIGKGEIQDSAGQGSRKDSKEGLTQRVQGLGFRF 348
S W + R W R G RTWPG G + +G+G R ++ R++ G R
Sbjct: 252 SAKWGKRERGWRRSLNRERGGRTWPGEAGIAGQRGGSGRGERGGIRKSNPGRLRSAGERE 311
Query: 349 QVG 357
+ G
Sbjct: 312 RGG 314
>02_03_0075 + 14846108-14847794,14847858-14848249
Length = 692
Score = 28.3 bits (60), Expect = 3.2
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 46 RRFWLRWTRPGW 81
R FW+ W RPGW
Sbjct: 113 RHFWIPWFRPGW 124
>09_06_0087 +
20771329-20771450,20771462-20771771,20771893-20772672,
20772854-20774002
Length = 786
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 294 EGFQRRVNPKGSRVGIPVSSG--RNMVGPW 377
EG NP G R +P+S+G ++GPW
Sbjct: 561 EGANLTFNPPGERESVPLSTGALEMVLGPW 590
>01_07_0381 - 43186467-43187219
Length = 250
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -1
Query: 388 LVTNHGPTMFRPLETGIPTLEPFGLTLLWNPSLNPGPRNPEFPPSQSSL 242
LV HGP + + IP L W L+P ++ F P + +L
Sbjct: 24 LVAQHGPHRWSIISGAIPGRSGKSCRLRWCNQLSPAVQHRPFTPQEDAL 72
>11_01_0034 +
254163-254251,254793-254892,255130-255231,255700-255756,
255778-255783
Length = 117
Score = 27.5 bits (58), Expect = 5.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 43 LRRFWLRWTRPGWIW 87
+RR L W +PGW W
Sbjct: 87 MRRLLLLWQKPGWAW 101
>08_02_0480 + 17632176-17632814,17633838-17633906
Length = 235
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +1
Query: 160 GRIWRW*SGIWTRSGR--IWWR 219
GRIWRW SG+ T G +W R
Sbjct: 156 GRIWRWWSGMTTGGGGSILWMR 177
>04_01_0282 - 3764110-3764666,3765117-3765180
Length = 206
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 268 QDSAGQGSRKDSKEGLTQRVQGLGFRFQVGGTWWVHG 378
+D A G + L + G G R GGTWW HG
Sbjct: 128 RDGADLGGMEQDDADLAVGLGGGGLR---GGTWWRHG 161
>02_01_0746 + 5554686-5556179
Length = 497
Score = 27.5 bits (58), Expect = 5.6
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -1
Query: 394 PPLVTNHGPTMFRPLETGIPTLEPFGLTLLWNPSLNPGPRNPEFP 260
PP + HG T+ R G+ L G +L+ P + G R+PE P
Sbjct: 427 PPHLNLHGVTVSRSPLRGLVGLH--GSSLMTPPPTDSGRRSPELP 469
>01_05_0298 + 20591470-20591892,20592696-20592892,20594446-20594707
Length = 293
Score = 27.5 bits (58), Expect = 5.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 335 WDSGFKWAEHGGSMVGHQRRDTKAR 409
W F W + GG + Q RD +AR
Sbjct: 215 WGLLFNWGQDGGQGIAFQLRDVRAR 239
>04_03_0489 + 16503325-16503747,16503916-16503978
Length = 161
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 124 PGHR*SRFWSGSGRIWRW 177
P HR S W G GR WRW
Sbjct: 111 PPHR-SAGWVGDGREWRW 127
>12_01_0874 + 8384332-8384657,8385447-8386044
Length = 307
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 184 GIW-TRSGRIWWR*SGIRTWPGRIGKGEIQDSAGQGSRKDSKEG 312
G+W GR W R + WP R +G + G GSR + G
Sbjct: 200 GLWRVGGGRRWRRLQAVLQWPRRAARGGV----GIGSRAATSAG 239
>05_02_0032 - 5842333-5842950
Length = 205
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 181 SGIWTRSGRIWWR*SGIRTWPGRIGKG 261
SG T G IWWR R W GR G G
Sbjct: 60 SGGTTVGGGIWWR--RWRRWQGRRGDG 84
>05_01_0566 - 4940743-4940980,4941418-4941564,4941655-4941854
Length = 194
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 278 RARVQGRIXXXXXXXXXXXWDSGFKWAEHGGSMV 379
RARV GRI D GFKW ++G V
Sbjct: 77 RARVNGRIGFRTRSEVEIL-DDGFKWRKYGKKAV 109
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 381 PTMDPPCSAHLKPESQPLNPL 319
P PP ++HL+P S L PL
Sbjct: 290 PQQPPPTTSHLRPGSPELRPL 310
>04_03_0785 + 19619062-19619532,19620047-19621012
Length = 478
Score = 26.6 bits (56), Expect = 9.7
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +3
Query: 258 GGNSGFRGPGFKEGFQRRVNPK-GSRVGIPVSSGRNMVGPWLVTNGGIPK 404
GG G G G EGF+ RV GSR+ V W V G + +
Sbjct: 5 GGGGGGGGGGGGEGFEERVKRLFGSRLFDDVPGSSFPAASWSVAAGDVER 54
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = -3
Query: 311 PSLESFLEPWPAES*ISPFPILPGHVRIPDYRHQILPDLVQIP 183
P S+ P P S +P P PG P Y Q P IP
Sbjct: 440 PPYASYPPPPPGSSMYNPPPPAPGQATPPPYGVQYAPPPAPIP 482
>04_01_0601 + 7918220-7918559,7919082-7919158
Length = 138
Score = 26.6 bits (56), Expect = 9.7
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = +1
Query: 202 GRIWWR*SG-IRTWPGRIGKGEIQDSAGQGSRKDSKEGLTQRVQGLGFRFQVGGTWWVHG 378
GR WR G +R G G+GE G G + + +RV G G +G W G
Sbjct: 66 GRSPWRGGGEVRAVEGE-GEGEDGGDGGDGEQAGGESAGGRRVVGGGGGGAMGARWRAMG 124
Query: 379 WSPTAG 396
G
Sbjct: 125 GGDDGG 130
>03_05_0722 + 27139790-27140035,27140176-27140217
Length = 95
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 279 GPGFKEGFQRRVNPKGS-RVGIPVSSGRNMVGPW 377
G G K G +R+ G RVG+ ++SG + G W
Sbjct: 30 GTGEKRGRERKREGGGKKRVGVAIASGGDASGTW 63
>01_04_0124 +
16359695-16359734,16360217-16360453,16361133-16362104,
16362211-16362398,16362564-16363942,16364024-16365047,
16365171-16365566,16367484-16367999,16368085-16368226,
16369409-16369553,16371351-16371432,16371851-16371895,
16372018-16372140
Length = 1762
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 257 FPILPGHVRIPDYRHQILPDLVQIPDYHLQILPDPDQNLDHRCPGHR 117
F ILP RIP + + L+ +Y Q+L +P Q CPG +
Sbjct: 194 FSILPKVSRIPSKVYLVYTGLLATSEYLFQMLCEPAQ----MCPGQQ 236
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,318,988
Number of Sequences: 37544
Number of extensions: 289768
Number of successful extensions: 926
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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