Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H11
         (463 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127657-1|BAC87075.1|  266|Homo sapiens protein ( Homo sapiens ...    31   1.5  
Z92544-3|CAM26349.1|  438|Homo sapiens rhomboid, veinlet-like 1 ...    29   7.8  
Y17108-1|CAA76629.1|  438|Homo sapiens rhomboid-related protein ...    29   7.8  
BC120875-1|AAI20876.1|  438|Homo sapiens rhomboid, veinlet-like ...    29   7.8  
BC120874-1|AAI20875.1|  438|Homo sapiens rhomboid, veinlet-like ...    29   7.8  
AK023978-1|BAB14750.1|  842|Homo sapiens protein ( Homo sapiens ...    29   7.8  
AE006464-9|AAK61241.1|  438|Homo sapiens rhomboid related protei...    29   7.8  

>AK127657-1|BAC87075.1|  266|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45755 fis, clone MESAN2007032. ).
          Length = 266

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -1

Query: 409 ACFGIPPLVTNHGPTMFRPLETGIPTLEPFGLTLLWNPSLNPG 281
           A F  PP  T   P+   PL + +  L P  L L+WN  L PG
Sbjct: 177 ALFFCPPPSTLFPPSSLHPLPSSLYPL-PSSLRLIWNRGLGPG 218


>Z92544-3|CAM26349.1|  438|Homo sapiens rhomboid, veinlet-like 1
           (Drosophila) protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
 Frame = +3

Query: 246 EDWEGGNSGFRGPGFKEG--FQRRVNPKGSRVGIPVSSGRNMVGPWLVTNG 392
           EDW+ G S    PG K+G   Q    P   +   P     +  GP L + G
Sbjct: 14  EDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPALWSRG 64


>Y17108-1|CAA76629.1|  438|Homo sapiens rhomboid-related protein
           protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
 Frame = +3

Query: 246 EDWEGGNSGFRGPGFKEG--FQRRVNPKGSRVGIPVSSGRNMVGPWLVTNG 392
           EDW+ G S    PG K+G   Q    P   +   P     +  GP L + G
Sbjct: 14  EDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPALWSRG 64


>BC120875-1|AAI20876.1|  438|Homo sapiens rhomboid, veinlet-like 1
           (Drosophila) protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
 Frame = +3

Query: 246 EDWEGGNSGFRGPGFKEG--FQRRVNPKGSRVGIPVSSGRNMVGPWLVTNG 392
           EDW+ G S    PG K+G   Q    P   +   P     +  GP L + G
Sbjct: 14  EDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPALWSRG 64


>BC120874-1|AAI20875.1|  438|Homo sapiens rhomboid, veinlet-like 1
           (Drosophila) protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
 Frame = +3

Query: 246 EDWEGGNSGFRGPGFKEG--FQRRVNPKGSRVGIPVSSGRNMVGPWLVTNG 392
           EDW+ G S    PG K+G   Q    P   +   P     +  GP L + G
Sbjct: 14  EDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPALWSRG 64


>AK023978-1|BAB14750.1|  842|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13916 fis, clone Y79AA1000342, moderately
           similar to Homo sapiens Ciz1 mRNA. ).
          Length = 842

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 195 KVREDLVAVIRDTDMAREDWEGGNS 269
           KV E+L   +R  D++RE+W+G  +
Sbjct: 701 KVEEELCKQVRSRDISREEWKGSET 725


>AE006464-9|AAK61241.1|  438|Homo sapiens rhomboid related protein
           protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
 Frame = +3

Query: 246 EDWEGGNSGFRGPGFKEG--FQRRVNPKGSRVGIPVSSGRNMVGPWLVTNG 392
           EDW+ G S    PG K+G   Q    P   +   P     +  GP L + G
Sbjct: 14  EDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPALWSRG 64


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,753,191
Number of Sequences: 237096
Number of extensions: 1593696
Number of successful extensions: 4363
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4362
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)