Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H11
         (463 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   2.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   2.8  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   6.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   6.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   6.5  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 198 VREDLVAVIRDTDMAREDW-EGGNS 269
           +R DLV +++  + +  DW  GGN+
Sbjct: 563 LRGDLVRILKQANQSVPDWMMGGNA 587


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = -3

Query: 224  DYRHQILPDLVQIPDYHLQILPDPDQNLDHRCPGHRVLV*NLGCYLQIHPGLVH 63
            D+RH   P+LV++ D    + P     L H  P       ++     +H G +H
Sbjct: 861  DWRHWKFPNLVEVLDEFPSVRPFAPLLLLHLTPLQPRFY-SISSSPDVHQGQIH 913


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/30 (23%), Positives = 13/30 (43%)
 Frame = -1

Query: 385 VTNHGPTMFRPLETGIPTLEPFGLTLLWNP 296
           V NH        +  +  +EP+    +W+P
Sbjct: 121 VPNHTSDQHEWFQLSLKNIEPYNNYYIWHP 150


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 307 LWNPSLNPGPRNPEFPPSQSSL 242
           L+NP+L     +P++P + S +
Sbjct: 428 LYNPALIQSQPSPQYPSTSSHI 449


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/30 (23%), Positives = 13/30 (43%)
 Frame = -1

Query: 385 VTNHGPTMFRPLETGIPTLEPFGLTLLWNP 296
           V NH        +  +  +EP+    +W+P
Sbjct: 121 VPNHTSDQHEWFQLSLKNIEPYNNYYIWHP 150


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,035
Number of Sequences: 438
Number of extensions: 3025
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)