Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H10
         (423 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_15810| Best HMM Match : No HMM Matches (HMM E-Value=.)              77   8e-15
SB_12300| Best HMM Match : UCH (HMM E-Value=6e-18)                     42   2e-04
SB_41240| Best HMM Match : UCH (HMM E-Value=9.2e-25)                   42   3e-04
SB_16315| Best HMM Match : No HMM Matches (HMM E-Value=.)              41   4e-04
SB_43026| Best HMM Match : No HMM Matches (HMM E-Value=.)              39   0.002
SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12)                     37   0.006
SB_21866| Best HMM Match : UCH (HMM E-Value=0)                         37   0.006
SB_16638| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.010
SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42)               36   0.010
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)               36   0.010
SB_6591| Best HMM Match : UCH (HMM E-Value=0.00022)                    35   0.024
SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.032
SB_8927| Best HMM Match : UCH (HMM E-Value=0)                          34   0.042
SB_20219| Best HMM Match : UCH (HMM E-Value=2.7e-06)                   34   0.056
SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.074
SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.17 
SB_18912| Best HMM Match : UCH (HMM E-Value=5.3e-06)                   32   0.23 
SB_2588| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.23 
SB_40593| Best HMM Match : UCH (HMM E-Value=1.4e-07)                   29   1.2  
SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.1  
SB_46788| Best HMM Match : LRR_1 (HMM E-Value=9.1e-12)                 29   2.1  
SB_2637| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   2.8  
SB_24189| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.7  
SB_58060| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.5  
SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06)                   27   8.5  

>SB_15810| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 312

 Score = 76.6 bits (180), Expect = 8e-15
 Identities = 50/121 (41%), Positives = 62/121 (51%)
 Frame = +1

Query: 1   ALDLPEGLINLGNTCYMNATVQCLKTVPELKNALLNYDKASGGGTAGDLTSALSDTMSXX 180
           A  LP GL NLGNTCYMNATVQCL+ VPEL ++L NY    G G+  D+ S  S T++  
Sbjct: 92  AFKLPAGLNNLGNTCYMNATVQCLRNVPELHDSLTNYSGNLGFGS--DIGSPESVTVALR 149

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXPRFAERAAGGGLAQQDASECWTEIVRALQQRLPXPPI 360
                                        A    +  QDA+ECWT++VR LQQ+LP  P 
Sbjct: 150 DLFKTMDK------------------TSEAVPPIIFLQDANECWTQMVRVLQQKLPGQPQ 191

Query: 361 A 363
           A
Sbjct: 192 A 192


>SB_12300| Best HMM Match : UCH (HMM E-Value=6e-18)
          Length = 457

 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +1

Query: 19  GLINLGNTCYMNATVQCLKTVPELKNALLNYDKASGGG 132
           GL+N   TCY+N+ +Q L   PE +NA+ N    +GGG
Sbjct: 208 GLVNQAMTCYLNSLLQTLYMTPEFRNAIYNQLSENGGG 245


>SB_41240| Best HMM Match : UCH (HMM E-Value=9.2e-25)
          Length = 1088

 Score = 41.5 bits (93), Expect = 3e-04
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +1

Query: 19  GLINLGNTCYMNATVQCLKTVPELK 93
           GL NLGNTCYMN+ +Q L T+PE K
Sbjct: 216 GLRNLGNTCYMNSVLQVLMTLPEFK 240


>SB_16315| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 92

 Score = 41.1 bits (92), Expect = 4e-04
 Identities = 21/41 (51%), Positives = 27/41 (65%)
 Frame = +1

Query: 19  GLINLGNTCYMNATVQCLKTVPELKNALLNYDKASGGGTAG 141
           GLINLGNTC+MN  VQ L   P L++  L+ D+ +  G AG
Sbjct: 40  GLINLGNTCFMNCIVQALTHTPLLRDYFLS-DQHNCKGDAG 79


>SB_43026| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 89

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 19/38 (50%), Positives = 23/38 (60%)
 Frame = +1

Query: 4   LDLPEGLINLGNTCYMNATVQCLKTVPELKNALLNYDK 117
           L L  GL NLGNTCY+NAT+Q L     +   + NY K
Sbjct: 52  LGLVRGLKNLGNTCYLNATLQMLARDSVIDKLIGNYVK 89


>SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12)
          Length = 893

 Score = 37.1 bits (82), Expect = 0.006
 Identities = 16/23 (69%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = +1

Query: 19  GLINLGNTCYMNATVQCL-KTVP 84
           GL NLGNTCYMN+ +QCL  T P
Sbjct: 697 GLRNLGNTCYMNSVLQCLFNTAP 719


>SB_21866| Best HMM Match : UCH (HMM E-Value=0)
          Length = 2165

 Score = 37.1 bits (82), Expect = 0.006
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +1

Query: 19   GLINLGNTCYMNATVQCLKTVPELKNALLNYDKAS 123
            GL N G TCYMN+ +Q L  +PEL+  +L  + A+
Sbjct: 1257 GLKNAGATCYMNSVIQQLFMIPELRKGVLAVEGAA 1291


>SB_16638| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 349

 Score = 36.3 bits (80), Expect = 0.010
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +1

Query: 19  GLINLGNTCYMNATVQCLKTVPELKNALLN 108
           GL NLGNTC+MN+ +QCL     L    L+
Sbjct: 223 GLANLGNTCFMNSGLQCLSNTMTLTKYFLS 252


>SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42)
          Length = 1712

 Score = 36.3 bits (80), Expect = 0.010
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +1

Query: 19  GLINLGNTCYMNATVQCLKTVPELKNALLN 108
           GL NLGNTC+MNA +QCL  +   +   L+
Sbjct: 465 GLENLGNTCFMNAGLQCLFVIKPFQRFFLS 494


>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2670

 Score = 36.3 bits (80), Expect = 0.010
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = +1

Query: 19  GLINLGNTCYMNATVQCLKTVPEL 90
           GL+NLGNTCYMN+ +Q L  + +L
Sbjct: 404 GLVNLGNTCYMNSVLQSLYMLEDL 427


>SB_6591| Best HMM Match : UCH (HMM E-Value=0.00022)
          Length = 340

 Score = 35.1 bits (77), Expect = 0.024
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = +1

Query: 19  GLINLGNTCYMNATVQCL 72
           GL+N+GNTCYMNA +Q L
Sbjct: 124 GLMNIGNTCYMNAALQAL 141


>SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2708

 Score = 34.7 bits (76), Expect = 0.032
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = +1

Query: 19   GLINLGNTCYMNATVQCLKTVPELKNALLN 108
            G+INLG TCYM + +Q L  +P+ + ++LN
Sbjct: 1123 GIINLGATCYMASCIQQLFLMPQARCSILN 1152


>SB_8927| Best HMM Match : UCH (HMM E-Value=0)
          Length = 316

 Score = 34.3 bits (75), Expect = 0.042
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 19  GLINLGNTCYMNATVQCLKTVPELKNALLNYDKAS 123
           GL+N GNTCY N+ +Q L      ++ +L+Y   S
Sbjct: 24  GLVNFGNTCYCNSVLQALFFCRPFRDKVLSYKPPS 58


>SB_20219| Best HMM Match : UCH (HMM E-Value=2.7e-06)
          Length = 543

 Score = 33.9 bits (74), Expect = 0.056
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 19  GLINLGNTCYMNATVQCLKTVPELKNALLNYDK 117
           GL N G TCY+N+ +Q L   PE    +L  +K
Sbjct: 43  GLQNQGGTCYLNSLIQTLFLTPEFTENILKLEK 75


>SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 979

 Score = 33.5 bits (73), Expect = 0.074
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = +1

Query: 19  GLINLGNTCYMNATVQCLKTVPELKNAL 102
           GL NLGNTC++N+ VQ L     L N L
Sbjct: 117 GLSNLGNTCFLNSVVQVLTYTAPLVNYL 144


>SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2578

 Score = 32.3 bits (70), Expect = 0.17
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +1

Query: 19   GLINLGNTCYMNATVQCL 72
            GL N GNTC++NA +QCL
Sbjct: 1950 GLKNHGNTCFINAIIQCL 1967


>SB_18912| Best HMM Match : UCH (HMM E-Value=5.3e-06)
          Length = 781

 Score = 31.9 bits (69), Expect = 0.23
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +1

Query: 28  NLGNTCYMNATVQCLKTVPELKNALLN 108
           NLGNTCYMNA +Q L  +      L N
Sbjct: 608 NLGNTCYMNAILQSLLGIEPFAQDLAN 634


>SB_2588| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1068

 Score = 31.9 bits (69), Expect = 0.23
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 19  GLINLGNTCYMNATVQCLKTVPELKNALLNYDK 117
           GL N G TCYMN+ +Q L   P ++  +L  D+
Sbjct: 6   GLKNAGATCYMNSVLQQLYMQPGIREYVLGLDE 38


>SB_40593| Best HMM Match : UCH (HMM E-Value=1.4e-07)
          Length = 711

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 19  GLINLGNTCYMNATVQCLKTVPELKNALLNYDK 117
           GL N  N CY NA +Q L+  P   + + + DK
Sbjct: 67  GLKNRSNLCYANAVIQVLRNCPGFVDFVGDLDK 99


>SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1243

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 7   DLPEGLINLGNTCYMNATVQCLKTVPELKNAL 102
           +LP  L ++   CY+N     LK VPE+   L
Sbjct: 158 NLPSSLADMNGLCYLNLEANELKIVPEVVTKL 189


>SB_46788| Best HMM Match : LRR_1 (HMM E-Value=9.1e-12)
          Length = 139

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 7   DLPEGLINLGNTCYMNATVQCLKTVPELKNAL 102
           +LP  L ++   CY+N     LK VPE+   L
Sbjct: 57  NLPSSLADMNGLCYLNLEANELKIVPEVVTKL 88


>SB_2637| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 229

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 19 GLINLGNTCYMNATVQCLKTVPELK 93
          GL N G TCYMN+ +Q L   P ++
Sbjct: 6  GLKNAGATCYMNSVLQQLYMQPGIR 30


>SB_24189| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1220

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 19  GLINLGNTCYMNATVQCLKTVPELKNAL 102
           GL N G TCYMN+ +Q L     L+ A+
Sbjct: 282 GLKNQGATCYMNSLLQTLYFTCALRKAV 309


>SB_58060| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 863

 Score = 26.6 bits (56), Expect = 8.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 259 AERAAGGGLAQQDASECWTEIVRALQQ 339
           AE    G  AQQ AS CW  ++ ALQ+
Sbjct: 514 AEERRVGRFAQQTASACW-RLIHALQR 539


>SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06)
          Length = 362

 Score = 26.6 bits (56), Expect = 8.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 13  PEGLINLGNTCYMNATVQ 66
           P G  N+GNTC+ +A +Q
Sbjct: 235 PVGFKNVGNTCWFSAVIQ 252


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.314    0.133    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,120,288
Number of Sequences: 59808
Number of extensions: 142773
Number of successful extensions: 246
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 801830705
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)