Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_H10
(423 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g51710.1 68414.m05827 ubiquitin-specific protease 6, putative... 83 8e-17
At3g21280.1 68416.m02689 ubiquitin-specific protease 7, putative... 77 5e-15
At3g14400.1 68416.m01822 ubiquitin-specific protease 25 (UBP25) ... 44 3e-05
At1g04860.1 68414.m00482 ubiquitin-specific protease 2 (UBP2) id... 42 2e-04
At2g40930.1 68415.m05052 ubiquitin-specific protease 5, putative... 41 3e-04
At5g22030.2 68418.m02564 ubiquitin-specific protease 8, putative... 40 7e-04
At5g22030.1 68418.m02563 ubiquitin-specific protease 8, putative... 40 7e-04
At2g32780.1 68415.m04013 ubiquitin-specific protease 1, putative... 39 0.001
At1g32850.1 68414.m04048 ubiquitin carboxyl-terminal hydrolase f... 39 0.001
At4g10590.2 68417.m01733 ubiquitin carboxyl-terminal hydrolase f... 39 0.002
At4g10590.1 68417.m01732 ubiquitin carboxyl-terminal hydrolase f... 39 0.002
At4g10570.1 68417.m01730 ubiquitin carboxyl-terminal hydrolase f... 39 0.002
At5g65450.1 68418.m08231 ubiquitin carboxyl-terminal hydrolase f... 38 0.003
At5g10790.1 68418.m01254 ubiquitin-specific protease 22 (UBP22) ... 37 0.006
At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putativ... 36 0.011
At4g30890.2 68417.m04387 ubiquitin-specific protease 24, putativ... 35 0.026
At4g30890.1 68417.m04386 ubiquitin-specific protease 24, putativ... 35 0.026
At5g57990.1 68418.m07255 ubiquitin-specific protease 23, putativ... 34 0.046
At3g49600.1 68416.m05421 ubiquitin-specific protease 26 (UBP26) ... 34 0.046
At1g17110.1 68414.m02085 ubiquitin-specific protease 15 (UBP15) ... 34 0.046
At4g39370.2 68417.m05572 ubiquitin-specific protease 27, putativ... 33 0.080
At4g39370.1 68417.m05573 ubiquitin-specific protease 27, putativ... 33 0.080
At4g17895.1 68417.m02667 ubiquitin-specific protease 20, putativ... 33 0.080
At2g22310.1 68415.m02647 ubiquitin-specific protease 4 (UBP4) id... 32 0.14
At5g06600.2 68418.m00746 ubiquitin-specific protease 12 (UBP12) ... 32 0.18
At5g06600.1 68418.m00745 ubiquitin-specific protease 12 (UBP12) ... 32 0.18
At3g11910.1 68416.m01460 ubiquitin-specific protease, putative s... 32 0.18
At4g39910.1 68417.m05653 ubiquitin-specific protease 3 (UBP3) id... 31 0.24
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 31 0.24
At3g20630.1 68416.m02610 ubiquitin-specific protease 14, putativ... 31 0.32
At2g24640.1 68415.m02943 ubiquitin carboxyl-terminal hydrolase f... 31 0.32
At5g46740.1 68418.m05758 ubiquitin-specific protease 21 (UBP21) ... 29 1.7
At5g43730.1 68418.m05346 disease resistance protein (CC-NBS-LRR ... 28 3.0
At4g22350.1 68417.m03231 ubiquitin carboxyl-terminal hydrolase f... 27 4.0
At1g62400.1 68414.m07040 protein kinase, putative similar to pro... 27 5.2
At5g43740.2 68418.m05348 disease resistance protein (CC-NBS-LRR ... 27 6.9
At5g43740.1 68418.m05347 disease resistance protein (CC-NBS-LRR ... 27 6.9
At5g58950.1 68418.m07384 protein kinase family protein concontai... 26 9.1
>At1g51710.1 68414.m05827 ubiquitin-specific protease 6, putative
(UBP6) similar to GI:11993465
Length = 482
Score = 83.0 bits (196), Expect = 8e-17
Identities = 49/136 (36%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPELKNALLNYDKASGGGTAGDLTSALS-DTMSXXXXXXX 195
GL+NLGNTCYMN+TVQCLK+VPELK+AL NY A+ + L+ T
Sbjct: 105 GLVNLGNTCYMNSTVQCLKSVPELKSALSNYSLAARSNDVDQTSHMLTVATRELFGELDR 164
Query: 196 XXXXXXXXXXXXXXXXXXPRFAERAAGGGLAQQDASECWTEIVRALQQRLPXPPIAPSDR 375
P+F++ G + QQDA ECWT+++ L Q L P S+
Sbjct: 165 SVNAVSPSQFWMVLRKKYPQFSQLQNGMHM-QQDAEECWTQLLYTLSQSLKAP--TSSEG 221
Query: 376 NSVIEQYFGGTLDVEL 423
++ FG L L
Sbjct: 222 ADAVKALFGVNLQSRL 237
>At3g21280.1 68416.m02689 ubiquitin-specific protease 7, putative
(UBP7) similar to GI:11993467
Length = 532
Score = 77.0 bits (181), Expect = 5e-15
Identities = 45/128 (35%), Positives = 60/128 (46%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPELKNALLNYDKASGGGTAGDLTSALSDTMSXXXXXXXX 198
GL+NLGNTCYMN+T+QCL +VPELK+ L NY A T
Sbjct: 160 GLVNLGNTCYMNSTMQCLISVPELKSELSNYQSARTKDVDQTSHMLTVATRELFSELDKS 219
Query: 199 XXXXXXXXXXXXXXXXXPRFAERAAGGGLAQQDASECWTEIVRALQQRLPXPPIAPSDRN 378
P+FA+ G + QQDA ECWT+++ L Q L P +PS+
Sbjct: 220 VKAVAPMPFWMVLQKKYPQFAQLHNGNHM-QQDAEECWTQMLYTLSQSLKLP--SPSEDP 276
Query: 379 SVIEQYFG 402
++ FG
Sbjct: 277 DAVKALFG 284
>At3g14400.1 68416.m01822 ubiquitin-specific protease 25 (UBP25)
similar to GI:11993490
Length = 661
Score = 44.4 bits (100), Expect = 3e-05
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +1
Query: 13 PEGLINLGNTCYMNATVQCLKTVPELKNALLNYDKAS 123
P GL NLGNTCY+N+ +QCL P L N L + +S
Sbjct: 23 PLGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSS 59
>At1g04860.1 68414.m00482 ubiquitin-specific protease 2 (UBP2)
identical to GI:11993463
Length = 961
Score = 41.5 bits (93), Expect = 2e-04
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPELKNALLNYDKASGGGTAGDLTSAL 159
GL+NLGNTC+ N+ +Q L ++ L++ L K +G G G L S+L
Sbjct: 232 GLVNLGNTCFFNSIMQNLLSLDRLRDHFL---KENGSGVGGPLASSL 275
>At2g40930.1 68415.m05052 ubiquitin-specific protease 5, putative
(UBP5) similar to GI:6648604
Length = 924
Score = 41.1 bits (92), Expect = 3e-04
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPE 87
GL+NLGNTC+MN+ +QCL PE
Sbjct: 318 GLLNLGNTCFMNSAIQCLVHTPE 340
>At5g22030.2 68418.m02564 ubiquitin-specific protease 8, putative
(UBP8) similar to ubiquitin-specific protease 8 partial
sequence GI:11993469 [Arabidopsis thaliana]
Length = 622
Score = 39.9 bits (89), Expect = 7e-04
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPELKNALL-NYDK 117
GL NLGNTC+MN+++QCL P+L + L Y K
Sbjct: 31 GLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSK 64
>At5g22030.1 68418.m02563 ubiquitin-specific protease 8, putative
(UBP8) similar to ubiquitin-specific protease 8 partial
sequence GI:11993469 [Arabidopsis thaliana]
Length = 622
Score = 39.9 bits (89), Expect = 7e-04
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPELKNALL-NYDK 117
GL NLGNTC+MN+++QCL P+L + L Y K
Sbjct: 31 GLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSK 64
>At2g32780.1 68415.m04013 ubiquitin-specific protease 1, putative
(UBP1) similar to GI:11993461
Length = 1083
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPELKNALLNYDKASGGGTAGDLTSALSDTMS 174
GL+NLGNTC+ N+ +Q L ++ +L+ L D + G L +++ S
Sbjct: 203 GLVNLGNTCFFNSVMQNLLSLDQLREHFLKEDLSVSGPLVSSLKELFAESNS 254
>At1g32850.1 68414.m04048 ubiquitin carboxyl-terminal hydrolase
family protein similar to ubiquitin-specific protease
UBP5 [Arabidopsis thaliana] GI:6648604; contains Pfam
profile PF00443: Ubiquitin carboxyl-terminal hydrolase
Length = 892
Score = 39.1 bits (87), Expect = 0.001
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPEL 90
GL NLGNTC+MN+T+QCL P +
Sbjct: 302 GLQNLGNTCFMNSTLQCLAHTPPI 325
>At4g10590.2 68417.m01733 ubiquitin carboxyl-terminal hydrolase
family protein similar to ubiquitin-specific protease
UBP5 [Arabidopsis thaliana] GI:6648604; contains Pfam
profile PF00443: Ubiquitin carboxyl-terminal hydrolase
Length = 910
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPELKNALL-----NYDKASGGGTAGDLTSALSDTM 171
GL NLGNTC+MN+ +QCL P + L + ++ + G G+L A D +
Sbjct: 304 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLL 359
>At4g10590.1 68417.m01732 ubiquitin carboxyl-terminal hydrolase
family protein similar to ubiquitin-specific protease
UBP5 [Arabidopsis thaliana] GI:6648604; contains Pfam
profile PF00443: Ubiquitin carboxyl-terminal hydrolase
Length = 910
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPELKNALL-----NYDKASGGGTAGDLTSALSDTM 171
GL NLGNTC+MN+ +QCL P + L + ++ + G G+L A D +
Sbjct: 304 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLL 359
>At4g10570.1 68417.m01730 ubiquitin carboxyl-terminal hydrolase
family protein similar to ubiquitin-specific protease
UBP5 [Arabidopsis thaliana] GI:6648604; contains Pfam
profile PF00443: Ubiquitin carboxyl-terminal hydrolase
Length = 923
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPELKNALL-----NYDKASGGGTAGDLTSALSDTM 171
GL NLGNTC+MN+ +QCL P + L + ++ + G G+L A D +
Sbjct: 305 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLL 360
>At5g65450.1 68418.m08231 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 16 (UBP16)
[Arabidopsis thaliana] GI:11993477; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 731
Score = 37.9 bits (84), Expect = 0.003
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 13 PEGLINLGNTCYMNATVQCL 72
P GL+NLGN+CY NA +QCL
Sbjct: 328 PFGLVNLGNSCYANAVLQCL 347
>At5g10790.1 68418.m01254 ubiquitin-specific protease 22 (UBP22)
almost identical to ubiquitin-specific protease 22
GI:11993484 [Arabidopsis thaliana], one amino acid
difference
Length = 557
Score = 36.7 bits (81), Expect = 0.006
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPELKNALLN 108
GL NLG+TC+MNA +Q L P L+N L+
Sbjct: 178 GLNNLGSTCFMNAVLQALVHAPPLRNFWLS 207
>At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putative
(UBP16) similar to ubiquitin-specific protease 16
GI:11993477 [Arabidopsis thaliana]
Length = 1008
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 13 PEGLINLGNTCYMNATVQCLKTVPELKNALL 105
P GLIN+GN+C+ N QCL P L L
Sbjct: 541 PCGLINVGNSCFANVVFQCLMFTPPLTTYFL 571
>At4g30890.2 68417.m04387 ubiquitin-specific protease 24, putative
(UBP24) identical to ubiquitin-specific protease 24
[Arabidopsis thaliana] GI:11993488
Length = 551
Score = 34.7 bits (76), Expect = 0.026
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 13 PEGLINLGNTCYMNATVQCL 72
P GLIN GN C++NAT+Q L
Sbjct: 196 PRGLINAGNLCFLNATLQAL 215
>At4g30890.1 68417.m04386 ubiquitin-specific protease 24, putative
(UBP24) identical to ubiquitin-specific protease 24
[Arabidopsis thaliana] GI:11993488
Length = 551
Score = 34.7 bits (76), Expect = 0.026
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 13 PEGLINLGNTCYMNATVQCL 72
P GLIN GN C++NAT+Q L
Sbjct: 196 PRGLINAGNLCFLNATLQAL 215
>At5g57990.1 68418.m07255 ubiquitin-specific protease 23, putative
(UBP23) identical to GI:11993486
Length = 859
Score = 33.9 bits (74), Expect = 0.046
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCL 72
GL NLGNTC++N+ +QCL
Sbjct: 108 GLQNLGNTCFLNSVLQCL 125
>At3g49600.1 68416.m05421 ubiquitin-specific protease 26 (UBP26)
similar to GI:11993492; RNA binding protein - Homo
sapiens, EMBL:AB016089 (N-terminus), several ubiquitin
carboxyl-terminal hydrolases from aa pos. 712
Length = 1067
Score = 33.9 bits (74), Expect = 0.046
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 13 PEGLINLGNTCYMNATVQCL 72
P GL NLG TCY N+ +QCL
Sbjct: 105 PAGLTNLGATCYANSILQCL 124
>At1g17110.1 68414.m02085 ubiquitin-specific protease 15 (UBP15)
almost identical to ubiquitin-specific protease 15
GI:11993475 [Arabidopsis thaliana], 7 amino acid
difference
Length = 924
Score = 33.9 bits (74), Expect = 0.046
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 13 PEGLINLGNTCYMNATVQCLKTVPELKNALL 105
P GL+N GN+CY NA +Q L L LL
Sbjct: 437 PRGLVNCGNSCYANAVLQSLTCTKPLVAYLL 467
>At4g39370.2 68417.m05572 ubiquitin-specific protease 27, putative
(UBP27) similar to GI:11993494; ubiquitin specific
protease 66 - Gallus gallus,PID:g3800764
Length = 361
Score = 33.1 bits (72), Expect = 0.080
Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 1/113 (0%)
Frame = +1
Query: 10 LPEGLINLGNTCYMNATVQCLKTVPELKNALLNYDKASGGGTAGDLTSALSDTMSXXXXX 189
L GL NLGN C++N +Q L + + ++ L + + G AG+ L T +
Sbjct: 72 LVPGLQNLGNNCFLNVILQALASCKDFRSFLQWVLEDARGSLAGEQEEQLPLTFALSALL 131
Query: 190 XXXXXXXXXXXXXXXXXXXXPRFAERAAGGGL-AQQDASECWTEIVRALQQRL 345
+ A L +QQDA+E ++ +LQ+ +
Sbjct: 132 QELGTVGSRRSVSNPRKVMV-TLTDYAKNFNLTSQQDAAEALLHLISSLQEEI 183
>At4g39370.1 68417.m05573 ubiquitin-specific protease 27, putative
(UBP27) similar to GI:11993494; ubiquitin specific
protease 66 - Gallus gallus,PID:g3800764
Length = 494
Score = 33.1 bits (72), Expect = 0.080
Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 1/113 (0%)
Frame = +1
Query: 10 LPEGLINLGNTCYMNATVQCLKTVPELKNALLNYDKASGGGTAGDLTSALSDTMSXXXXX 189
L GL NLGN C++N +Q L + + ++ L + + G AG+ L T +
Sbjct: 72 LVPGLQNLGNNCFLNVILQALASCKDFRSFLQWVLEDARGSLAGEQEEQLPLTFALSALL 131
Query: 190 XXXXXXXXXXXXXXXXXXXXPRFAERAAGGGL-AQQDASECWTEIVRALQQRL 345
+ A L +QQDA+E ++ +LQ+ +
Sbjct: 132 QELGTVGSRRSVSNPRKVMV-TLTDYAKNFNLTSQQDAAEALLHLISSLQEEI 183
>At4g17895.1 68417.m02667 ubiquitin-specific protease 20, putative
(UBP20) identical to ubiquitin-specific protease 20
GI:11993480 [Arabidopsis thaliana]
Length = 695
Score = 33.1 bits (72), Expect = 0.080
Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCL-KTVPELKNAL 102
GL NLGN+C++N+ QC TVP +++ L
Sbjct: 177 GLWNLGNSCFLNSVFQCFTHTVPLIESLL 205
>At2g22310.1 68415.m02647 ubiquitin-specific protease 4 (UBP4)
identical to GI:2347100
Length = 365
Score = 32.3 bits (70), Expect = 0.14
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPELKNALLNYDKASGGGTAGDLTSALSDTMS 174
G N GNTCY N+ +Q L + LL + + +L + L+D S
Sbjct: 24 GFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTCLADLFS 75
>At5g06600.2 68418.m00746 ubiquitin-specific protease 12 (UBP12)
almost identical to ubiquitin-specific protease 12
GI:11993471 [Arabidopsis thaliana], one amino acid
difference
Length = 1115
Score = 31.9 bits (69), Expect = 0.18
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPELKNALLNYDKASGGGTAGDLTSAL 159
GL N G TCYMN+ +Q L +P + A+ + + AL
Sbjct: 199 GLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLAL 245
>At5g06600.1 68418.m00745 ubiquitin-specific protease 12 (UBP12)
almost identical to ubiquitin-specific protease 12
GI:11993471 [Arabidopsis thaliana], one amino acid
difference
Length = 1116
Score = 31.9 bits (69), Expect = 0.18
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPELKNALLNYDKASGGGTAGDLTSAL 159
GL N G TCYMN+ +Q L +P + A+ + + AL
Sbjct: 200 GLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLAL 246
>At3g11910.1 68416.m01460 ubiquitin-specific protease, putative
strong similarity to ubiquitin-specific protease 12
(UBP12) [Arabidopsis thaliana] GI:11993471; contains
Pfam profiles PF00443: Ubiquitin carboxyl-terminal
hydrolase, PF00917: MATH domain
Length = 1115
Score = 31.9 bits (69), Expect = 0.18
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPELKNALLNYDKASGGGTAGDLTSAL 159
GL N G TCYMN+ +Q L +P + A+ + + AL
Sbjct: 199 GLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLAL 245
>At4g39910.1 68417.m05653 ubiquitin-specific protease 3 (UBP3)
identical to GI:2347098
Length = 371
Score = 31.5 bits (68), Expect = 0.24
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPELKNALLNY--DKASGGGTAGDLTSALSDTMS 174
G N GNTCY N+ +Q L + LL Y S +L + L+D S
Sbjct: 24 GFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLMTCLADLFS 77
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 31.5 bits (68), Expect = 0.24
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 13 PEGLINLGNTCYMNATVQCLKTVPELKNALL 105
P GL+N GN+C+ N +QCL L LL
Sbjct: 167 PCGLMNCGNSCFANVILQCLSWTRPLVAYLL 197
>At3g20630.1 68416.m02610 ubiquitin-specific protease 14, putative
(UBP14) similar to ubiquitin-specific protease 14
GI:11993473 [Arabidopsis thaliana]
Length = 797
Score = 31.1 bits (67), Expect = 0.32
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQ 66
GL+NLGN+CY+ AT+Q
Sbjct: 309 GLVNLGNSCYLAATMQ 324
>At2g24640.1 68415.m02943 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 672
Score = 31.1 bits (67), Expect = 0.32
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 13 PEGLINLGNTCYMNATVQCLKTVPELKNALL 105
P GL N GN+C+ N +QCL L LL
Sbjct: 173 PCGLTNCGNSCFANVVLQCLSWTRPLVAYLL 203
>At5g46740.1 68418.m05758 ubiquitin-specific protease 21 (UBP21)
identical to ubiquitin-specific protease 21 GI:11993482
[Arabidopsis thaliana]
Length = 732
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCL-KTVP 84
GL N GNTC++ + +QC TVP
Sbjct: 164 GLYNSGNTCFIASVLQCFTHTVP 186
>At5g43730.1 68418.m05346 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 848
Score = 27.9 bits (59), Expect = 3.0
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +1
Query: 4 LDLPEGLINLGNTCYMNATVQCLKTVP 84
++LPE + NLG+ Y+N ++ +K++P
Sbjct: 571 IELPEEISNLGSLQYLNLSLTGIKSLP 597
>At4g22350.1 68417.m03231 ubiquitin carboxyl-terminal hydrolase
family protein similar to U4/U6.U5 tri-snRNP-associated
65 kDa protein [Homo sapiens] GI:13926071; contains Pfam
profile PF00443: Ubiquitin carboxyl-terminal hydrolase
Length = 510
Score = 27.5 bits (58), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Frame = +1
Query: 19 GLINLGNTCYMNATVQCLKTVPELKNALL---NYD--KASGGGTAGDLT 150
GL N+ T ++N T+Q L V L+N L NY K+ G G+LT
Sbjct: 201 GLNNIQKTEFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLGHRFGELT 249
>At1g62400.1 68414.m07040 protein kinase, putative similar to
protein kinase gi|170047|gb|AAA34002; contains protein
kinase domain, Pfam:PF00069
Length = 345
Score = 27.1 bits (57), Expect = 5.2
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2
Query: 404 PPKYCSITEFLSEG 363
PP YC ITE++S+G
Sbjct: 112 PPVYCIITEYMSQG 125
>At5g43740.2 68418.m05348 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 862
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 4 LDLPEGLINLGNTCYMNATVQCLKTVP 84
+ LPE + NLG+ Y+N ++ +K++P
Sbjct: 571 IKLPEEISNLGSLQYLNISLTGIKSLP 597
>At5g43740.1 68418.m05347 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 862
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 4 LDLPEGLINLGNTCYMNATVQCLKTVP 84
+ LPE + NLG+ Y+N ++ +K++P
Sbjct: 571 IKLPEEISNLGSLQYLNISLTGIKSLP 597
>At5g58950.1 68418.m07384 protein kinase family protein concontains
protein kinase domain, Pfam:PF00069
Length = 525
Score = 26.2 bits (55), Expect = 9.1
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2
Query: 404 PPKYCSITEFLSEGAI 357
PP YC +T++L EG++
Sbjct: 280 PPVYCVLTQYLPEGSL 295
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.133 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,054,768
Number of Sequences: 28952
Number of extensions: 94472
Number of successful extensions: 208
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 655255392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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