Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H08
         (533 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr...    31   0.69 
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep...    30   0.91 
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue...    30   0.91 
Z68760-4|CAE17822.1|  160|Caenorhabditis elegans Hypothetical pr...    28   3.7  
U41007-21|AAK84502.1|  465|Caenorhabditis elegans Hypothetical p...    27   8.5  
U41007-20|AAA82275.1|  455|Caenorhabditis elegans Hypothetical p...    27   8.5  

>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
           protein F12F6.6 protein.
          Length = 1126

 Score = 30.7 bits (66), Expect = 0.69
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 371 CAAVLCPSFEYMNTGRSTQCIFFH 442
           C A +CP  E+ + GRS +C F H
Sbjct: 460 CKAYICPFMEFQDGGRSFRCPFCH 483


>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
            homolog protein.
          Length = 1846

 Score = 30.3 bits (65), Expect = 0.91
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 466  EKYESIGKVKENTLGRSTSIHIFKRRTQYSSTT 368
            EK E++GK  +   G+   IHI K++   SSTT
Sbjct: 944  EKAENLGKAPKTLGGKKPLIHISKKKPSSSSTT 976


>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
            formation protein 2 protein.
          Length = 1843

 Score = 30.3 bits (65), Expect = 0.91
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 466  EKYESIGKVKENTLGRSTSIHIFKRRTQYSSTT 368
            EK E++GK  +   G+   IHI K++   SSTT
Sbjct: 941  EKAENLGKAPKTLGGKKPLIHISKKKPSSSSTT 973


>Z68760-4|CAE17822.1|  160|Caenorhabditis elegans Hypothetical
           protein F36H1.9 protein.
          Length = 160

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -1

Query: 131 FSI*SVTTVKFTHVHGQNLW 72
           F I  VT ++FT+++G+NLW
Sbjct: 103 FIIAGVTEIEFTNLYGENLW 122


>U41007-21|AAK84502.1|  465|Caenorhabditis elegans Hypothetical
           protein C33H5.18b protein.
          Length = 465

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +1

Query: 337 VIWFSIIIYQLLCCCIVSFV*IYEYW*IYPVYFLSP 444
           +IWF   +  ++CC I+S++  + +W   P+  LSP
Sbjct: 248 LIWFLAPVAMIICCDIMSYMFGF-FWGKTPLIKLSP 282


>U41007-20|AAA82275.1|  455|Caenorhabditis elegans Hypothetical
           protein C33H5.18a protein.
          Length = 455

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +1

Query: 337 VIWFSIIIYQLLCCCIVSFV*IYEYW*IYPVYFLSP 444
           +IWF   +  ++CC I+S++  + +W   P+  LSP
Sbjct: 238 LIWFLAPVAMIICCDIMSYMFGF-FWGKTPLIKLSP 272


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,976,932
Number of Sequences: 27780
Number of extensions: 245330
Number of successful extensions: 559
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)