Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_H07
(455 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117; Eukar... 270 7e-72
UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27; Euka... 228 4e-59
UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=... 189 2e-47
UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal ... 169 3e-41
UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillar... 164 9e-40
UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17; ... 149 3e-35
UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1; Encepha... 136 2e-31
UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7; A... 132 3e-30
UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19; ... 126 3e-28
UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2; A... 123 2e-27
UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=... 122 5e-27
UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1; Can... 119 3e-26
UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1; Cenar... 119 3e-26
UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4; T... 107 1e-22
UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole gen... 106 2e-22
UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultu... 103 2e-21
UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13 prot... 95 5e-19
UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6; H... 92 4e-18
UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 - R... 65 8e-10
UniRef50_Q8FV54 Cluster: Ribose ABC transporter, periplasmic D-r... 36 0.55
UniRef50_Q5CYT2 Cluster: 3CCCH domain containing protein; n=2; C... 35 0.72
UniRef50_UPI00015B5B76 Cluster: PREDICTED: similar to GA18084-PA... 34 1.7
UniRef50_Q6CWX5 Cluster: Similar to sp|Q9C2M3 Neurospora crassa ... 34 1.7
UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7; E... 34 1.7
UniRef50_Q6D8R0 Cluster: Putative membrane protein; n=1; Pectoba... 33 2.9
UniRef50_A5V7X6 Cluster: TonB-dependent receptor precursor; n=1;... 33 2.9
UniRef50_Q58MZ4 Cluster: T4-like baseplate tail tube cap; n=1; C... 33 2.9
UniRef50_Q3A384 Cluster: Predicted PTS family phosphotransferase... 33 3.8
UniRef50_A2QE31 Cluster: Remark: alternate name for S. cerevisia... 33 3.8
UniRef50_Q5P8U4 Cluster: Helicase/SNF2 family domain protein; n=... 32 5.1
UniRef50_A3VN55 Cluster: 3-dehydroquinate synthase; n=3; Alphapr... 32 5.1
UniRef50_A1V9P0 Cluster: ComEC/Rec2-related protein; n=2; Desulf... 32 5.1
UniRef50_A5CDA2 Cluster: Putative uncharacterized protein; n=1; ... 31 8.9
UniRef50_A4SA99 Cluster: Predicted protein; n=1; Ostreococcus lu... 31 8.9
UniRef50_A7SJ57 Cluster: Predicted protein; n=2; Eumetazoa|Rep: ... 31 8.9
UniRef50_Q8SUV1 Cluster: Putative uncharacterized protein ECU07_... 31 8.9
>UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117;
Eukaryota|Rep: 40S ribosomal protein S13 - Homo sapiens
(Human)
Length = 151
Score = 270 bits (663), Expect = 7e-72
Identities = 125/139 (89%), Positives = 135/139 (97%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 216
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 217 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 396
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 397 RIHRLARYYKTKSVLPPNW 453
RIHRLARYYKTK VLPPNW
Sbjct: 121 RIHRLARYYKTKRVLPPNW 139
>UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27;
Eukaryota|Rep: 40S ribosomal protein S13-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 151
Score = 228 bits (558), Expect = 4e-59
Identities = 108/139 (77%), Positives = 119/139 (85%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 216
MGRMH+ GKGIS SALPY+RS P+WLK T DV E I K KKGLTPSQIGV+LRDSHG+
Sbjct: 1 MGRMHSRGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGI 60
Query: 217 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 396
QV+ VTG KILRI+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVES
Sbjct: 61 PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
Query: 397 RIHRLARYYKTKSVLPPNW 453
RIHRLARYYK LPP W
Sbjct: 121 RIHRLARYYKKTKKLPPVW 139
>UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=39;
Eukaryota|Rep: 40S ribosomal protein S13, putative -
Leishmania major
Length = 151
Score = 189 bits (461), Expect = 2e-47
Identities = 86/139 (61%), Positives = 110/139 (79%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 216
M RMH G+G + SALPYRR+ P WLK+ + +V + + K +KG+ PSQIG+ LRDS G+
Sbjct: 1 MVRMHGNGRGKASSALPYRRTPPAWLKIASRNVVKMVCKSSRKGMMPSQIGMELRDSMGI 60
Query: 217 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 396
AQV+ VTG+KILRI+K GLAP++PEDLY+L+K+A MRKHLER+ D+D+K+RLILVES
Sbjct: 61 AQVKNVTGRKILRILKHNGLAPEIPEDLYFLVKRATQMRKHLERHTTDRDTKYRLILVES 120
Query: 397 RIHRLARYYKTKSVLPPNW 453
RIHRLARYYK LPP W
Sbjct: 121 RIHRLARYYKRVKQLPPTW 139
>UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal
protein S13; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S13 - Rattus norvegicus
Length = 131
Score = 169 bits (410), Expect = 3e-41
Identities = 89/139 (64%), Positives = 100/139 (71%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 216
MG MHAP K +SQS LPY SV WLK T+DD+KEQI+KL KKGLTPSQIGV LRD+HG
Sbjct: 1 MGAMHAPRKALSQSVLPYHHSVLMWLKSTSDDMKEQIYKLAKKGLTPSQIGVTLRDTHG- 59
Query: 217 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 396
LA DLP DLY+LIKKAVA++KHLERNRKDKD+KF L L ES
Sbjct: 60 -------------------LALDLPGDLYHLIKKAVAVQKHLERNRKDKDAKFCLSLTES 100
Query: 397 RIHRLARYYKTKSVLPPNW 453
RIH LARY KTK +LPP+W
Sbjct: 101 RIHPLARYCKTKRMLPPSW 119
>UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillardia
theta|Rep: 40S ribosomal protein S13 - Guillardia theta
(Cryptomonas phi)
Length = 147
Score = 164 bits (398), Expect = 9e-40
Identities = 73/131 (55%), Positives = 99/131 (75%)
Frame = +1
Query: 61 KGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTG 240
KGI+ S +P+ R+ P W+K + + + E I L KKGL PSQIG LRDS G+ V+ + G
Sbjct: 6 KGIASSLIPFERNAPLWVKDSKEKINEIICNLAKKGLVPSQIGSYLRDSAGIPLVKNIAG 65
Query: 241 KKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARY 420
+ I++I+K GL P++PEDL++LIKKA+ ++KHLERN+KDKDSKFRLIL ES+IHRL+RY
Sbjct: 66 RNIVKILKKNGLNPEIPEDLFFLIKKAINIKKHLERNKKDKDSKFRLILTESKIHRLSRY 125
Query: 421 YKTKSVLPPNW 453
YK +P NW
Sbjct: 126 YKRIQRIPINW 136
>UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17;
Euryarchaeota|Rep: 30S ribosomal protein S15P/S13e -
Methanococcus jannaschii
Length = 153
Score = 149 bits (361), Expect = 3e-35
Identities = 69/139 (49%), Positives = 99/139 (71%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 216
M RMHA +G S S P R+ VP W++ T + V++ + +L KKG +QIG++LRD++G+
Sbjct: 1 MARMHARKRGRSGSKRPVRKEVPEWVQYTPEQVEQLVVELAKKGYQSAQIGLILRDTYGI 60
Query: 217 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 396
V+ +TGKKI +IMK GL P +PEDL L+++AV +RKHLE++ KD SK L L+ES
Sbjct: 61 PDVKLITGKKISKIMKEHGLYPKVPEDLLNLMRRAVNLRKHLEQHPKDLHSKRGLQLIES 120
Query: 397 RIHRLARYYKTKSVLPPNW 453
+I RL +YYK+K VLP +W
Sbjct: 121 KIRRLVKYYKSKGVLPADW 139
>UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S13
- Encephalitozoon cuniculi
Length = 148
Score = 136 bits (329), Expect = 2e-31
Identities = 60/139 (43%), Positives = 87/139 (62%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 216
M +MH+ GKG S S PY + PTWL + D++K + ++G KG+ IG LRD +G+
Sbjct: 1 MAKMHSSGKGRSGSVKPYATAFPTWLTKSVDEIKSDVIQMGNKGVPAPDIGTRLRDEYGI 60
Query: 217 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 396
+ V G+ I R ++ G+ P +P DL L+ +A +R HL RKD +K+RLILV S
Sbjct: 61 GKASDVLGESITRFLQRNGVVPKIPHDLESLVHRANTLRSHLNIYRKDNSAKYRLILVSS 120
Query: 397 RIHRLARYYKTKSVLPPNW 453
R++R+ARYYK K +P NW
Sbjct: 121 RMYRVARYYKRKMRIPGNW 139
>UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Archaeoglobus fulgidus
Length = 152
Score = 132 bits (319), Expect = 3e-30
Identities = 64/139 (46%), Positives = 95/139 (68%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 216
M R+HA +G S S YR S P W+ ++ ++V++++ +L +G PS IG++LRD +G+
Sbjct: 1 MARIHARRRGKSGSKRIYRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGI 60
Query: 217 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 396
V+ VTGKKI +I+K G+ PEDL LIKKA+ +R HLE +RKDK ++ L L+E+
Sbjct: 61 PSVKQVTGKKIQKILKEHGVEIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEA 120
Query: 397 RIHRLARYYKTKSVLPPNW 453
+I RL+ YYK K VLP +W
Sbjct: 121 KIWRLSSYYKEKGVLPADW 139
>UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Pyrococcus abyssi
Length = 158
Score = 126 bits (303), Expect = 3e-28
Identities = 65/146 (44%), Positives = 93/146 (63%), Gaps = 7/146 (4%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 216
M RMHA +G S S P R + P WL+ T +D++ + KL K+G + + IG +LRD +G+
Sbjct: 1 MARMHARKRGKSGSKRPPRTAPPIWLEYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGI 60
Query: 217 AQVRFVT-----GKK--ILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKF 375
V+ +K I RI++ GLAP++PEDL +LIK+AV +RKHLE++ KD S
Sbjct: 61 PTVKLFRDPDNPNRKLTITRILEKHGLAPEIPEDLMFLIKRAVNLRKHLEQHPKDLHSMR 120
Query: 376 RLILVESRIHRLARYYKTKSVLPPNW 453
L L+ES+I RL +YYK K LP +W
Sbjct: 121 GLQLIESKIRRLVKYYKRKGKLPKDW 146
>UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Nanoarchaeum equitans
Length = 154
Score = 123 bits (296), Expect = 2e-27
Identities = 59/141 (41%), Positives = 87/141 (61%), Gaps = 2/141 (1%)
Frame = +1
Query: 37 MGRMHAPGK--GISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSH 210
M R+HA + G S S P R + P W + V+ +I +L K+G +P+ IG++LRD +
Sbjct: 1 MSRLHAHKRYHGQSGSKRPLRTTKPEWAPYDKEFVENKIIELAKQGYSPAMIGLILRDQY 60
Query: 211 GVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILV 390
G+ VR GK + ++ GL PD+P DL YL+K+A + KH+E N +D +K L+
Sbjct: 61 GIPDVRLYIGKSLQDFLEEKGLLPDIPWDLIYLLKRAYRVYKHIELNPRDTQAKRNYQLI 120
Query: 391 ESRIHRLARYYKTKSVLPPNW 453
S+IHRLA+YYK K VLP +W
Sbjct: 121 ISKIHRLAKYYKRKGVLPKDW 141
>UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=1;
Bigelowiella natans|Rep: Small subunit ribosomal protein
S13 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 183
Score = 122 bits (293), Expect = 5e-27
Identities = 61/140 (43%), Positives = 90/140 (64%), Gaps = 1/140 (0%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKG-LTPSQIGVMLRDSHG 213
MG+M++ GKGIS + +PYR+ W LT+ ++ + I L K L PS+IG++LRD
Sbjct: 1 MGKMYSKGKGISSTTVPYRKYSCEWKGLTSQNLIKIIANLAKNNNLPPSKIGLVLRDEKL 60
Query: 214 VAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 393
V R ++G I +I++ GL P +PEDL+YLIKKA ++ HL + D +++ L L+E
Sbjct: 61 VVDTRNISGMNISKILRLKGLVPLVPEDLFYLIKKANKIKAHLSDFKHDLANRYHLNLIE 120
Query: 394 SRIHRLARYYKTKSVLPPNW 453
S I+RL+RYYK LP NW
Sbjct: 121 SHIYRLSRYYKRIFRLPKNW 140
>UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Ribosomal
S13S15-like protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 149
Score = 119 bits (286), Expect = 3e-26
Identities = 54/139 (38%), Positives = 85/139 (61%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 216
MGRMH G S S P P+W+ + +++E + K K GLTPSQIG+ LRD H +
Sbjct: 1 MGRMHTHRHGKSHSIRPATLRAPSWITQSPAEIEELVIKYSKDGLTPSQIGIKLRDQHSI 60
Query: 217 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 396
++ +T K I I++ L ++PEDL ++KKAV +++HL+ N+ D+ + L L+E+
Sbjct: 61 PLIKPITKKTIGEILEENDLKAEMPEDLENIVKKAVGLQRHLKENKGDRRNVRSLELIEA 120
Query: 397 RIHRLARYYKTKSVLPPNW 453
++HRL+ YYK +P W
Sbjct: 121 KVHRLSVYYKKIGRIPATW 139
>UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein S15P/S13E -
Cenarchaeum symbiosum
Length = 148
Score = 119 bits (286), Expect = 3e-26
Identities = 56/139 (40%), Positives = 86/139 (61%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 216
MGR+H+ G S S P P+W++ +V++ I K K+GL PSQIG LRD H +
Sbjct: 1 MGRLHSHRHGKSHSIRPSSPKAPSWIQ-GPGEVEDLIVKYAKEGLAPSQIGSKLRDQHAI 59
Query: 217 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 396
R +TGK + +IM+ G P+LPEDL +++KAV +++HL N+ D+ + L L+E+
Sbjct: 60 PLTRPITGKSVTQIMEEHGATPELPEDLNNIVQKAVGLQRHLRANKGDRRNVRSLELIEA 119
Query: 397 RIHRLARYYKTKSVLPPNW 453
++HRL YYK +P +W
Sbjct: 120 KVHRLDVYYKRIGRIPKDW 138
>UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S15P/S13e -
Picrophilus torridus
Length = 146
Score = 107 bits (256), Expect = 1e-22
Identities = 54/139 (38%), Positives = 82/139 (58%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 216
M RMH +G S S R P+W++ + D++KE I K+ K+G+T S IG+ LRD + +
Sbjct: 1 MARMHTRKRGRSGSKRIEVRERPSWIQYSDDEIKEMIVKMRKQGMTKSMIGIRLRDQYAI 60
Query: 217 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 396
R V K+ +++K L D+PEDL LI++ KHL N+ D ++K + L+ S
Sbjct: 61 PGTRPVLHMKLGQVLKENNLESDVPEDLQALIERYKRAMKHLSLNKHDMNNKRKAQLIMS 120
Query: 397 RIHRLARYYKTKSVLPPNW 453
++ RL RYYK S LP +W
Sbjct: 121 KMLRLIRYYKRTSRLPQDW 139
>UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_187, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 129
Score = 106 bits (255), Expect = 2e-22
Identities = 48/60 (80%), Positives = 54/60 (90%)
Frame = +1
Query: 274 LAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNW 453
L P++PEDLY+LIKKAVA+RKHLER+RKDKDSKFRLI+VESRIHRLARYYK LPP W
Sbjct: 69 LGPEIPEDLYHLIKKAVAIRKHLERSRKDKDSKFRLIVVESRIHRLARYYKRTKKLPPVW 128
>UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultured
marine group II euryarchaeote 37F11|Rep: 30S ribosomal
protein S15 - uncultured marine group II euryarchaeote
37F11
Length = 151
Score = 103 bits (247), Expect = 2e-21
Identities = 52/139 (37%), Positives = 79/139 (56%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 216
M RM+A +G S S+ P+ P W A +++ I + K G++ +QIG +LRD H V
Sbjct: 1 MARMYASKRGKSGSSKPFMTEAPEWSNKDAKEIESLILQYFKDGMSTAQIGTILRDKHAV 60
Query: 217 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 396
VR V GK+I ++ + PEDL L+++AVA+ +HL N +D +K L L E+
Sbjct: 61 PNVRLVLGKRIGAVLSENDESGTYPEDLMNLMRQAVAIIEHLTTNSRDLHNKRSLELTEA 120
Query: 397 RIHRLARYYKTKSVLPPNW 453
+I RL YYK + L +W
Sbjct: 121 KIRRLGNYYKAEGRLDSDW 139
>UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13
protein; n=2; Pan troglodytes|Rep: PREDICTED: similar to
Rps13 protein - Pan troglodytes
Length = 269
Score = 95.5 bits (227), Expect = 5e-19
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = +1
Query: 28 AANMGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRD 204
AA GR+H PGKG+S+SAL Y SVPTWLKLT+D+VKEQI+KL KKGLTP QIGV+LRD
Sbjct: 211 AAITGRIHVPGKGLSRSALLYHHSVPTWLKLTSDNVKEQIYKLTKKGLTPPQIGVILRD 269
>UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S15P/S13e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 156
Score = 92.3 bits (219), Expect = 4e-18
Identities = 50/138 (36%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDS--H 210
M RMH +G S S P P W + D ++ ++ +L ++G +PS+IG+ LRD
Sbjct: 1 MARMHTRRRGSSDSDKPAADEPPEWSDVDEDAIEARVVELAEQGHSPSEIGLKLRDEGVQ 60
Query: 211 G--VAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLI 384
G + V TGKK+ I++ PDLPEDL L+++AV +R H++ N D +K L
Sbjct: 61 GTPIPDVSLATGKKVTEILEENEAEPDLPEDLRNLLERAVRLRDHMDENPGDYQNKRALQ 120
Query: 385 LVESRIHRLARYYKTKSV 438
+S+I RL YY+ V
Sbjct: 121 NTQSKIRRLIDYYRGDEV 138
>UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 -
Rattus norvegicus (Rat)
Length = 481
Score = 64.9 bits (151), Expect = 8e-10
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +1
Query: 28 AANMGRMHAPGKGISQSALPYRRSVPTWLKLTADDVK 138
+A +GRMHAPGKG+SQSALPYRRSV WLKL +DDVK
Sbjct: 441 SAIVGRMHAPGKGLSQSALPYRRSVLMWLKLMSDDVK 477
>UniRef50_Q8FV54 Cluster: Ribose ABC transporter, periplasmic
D-ribose-binding protein; n=4; Rhizobiales|Rep: Ribose
ABC transporter, periplasmic D-ribose-binding protein -
Brucella suis
Length = 355
Score = 35.5 bits (78), Expect = 0.55
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +1
Query: 97 SVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVR 228
+VPTW+K T D + +++ +L K+GL +M+ D+ G AQ +
Sbjct: 57 AVPTWMKQTEDTIVDEVAQLKKEGLVKD---LMITDAQGNAQTQ 97
>UniRef50_Q5CYT2 Cluster: 3CCCH domain containing protein; n=2;
Cryptosporidium|Rep: 3CCCH domain containing protein -
Cryptosporidium parvum Iowa II
Length = 591
Score = 35.1 bits (77), Expect = 0.72
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +1
Query: 106 TWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPD 285
T L++T D K + + K G+ GV+ R +HG A++R T K +LR K L P
Sbjct: 154 TELRVTNDFYKTSVCRYWKMGVK-CDAGVLCRHAHGEAELRKKTNKHLLR-RKDDQLPPS 211
Query: 286 LPED 297
+ ED
Sbjct: 212 IRED 215
>UniRef50_UPI00015B5B76 Cluster: PREDICTED: similar to GA18084-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA18084-PA - Nasonia vitripennis
Length = 803
Score = 33.9 bits (74), Expect = 1.7
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 155 SLKICSLTSSAVSFNQVGTLRRYGSA-DWDIPLPGACIRPILAAFYY 18
S+ I +TS+ ++ G LRRYG DWD L G IL++F+Y
Sbjct: 60 SIAIVKMTSNRTMTDEHGELRRYGQEFDWDTKLQGL----ILSSFFY 102
>UniRef50_Q6CWX5 Cluster: Similar to sp|Q9C2M3 Neurospora crassa
Related to kinesin-like protein KIF1C; n=1;
Kluyveromyces lactis|Rep: Similar to sp|Q9C2M3
Neurospora crassa Related to kinesin-like protein KIF1C
- Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 456
Score = 33.9 bits (74), Expect = 1.7
Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Frame = +1
Query: 70 SQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 249
S+ +PYR S+ TW+ +KE + K + + L +S ++ +R+ T K
Sbjct: 258 SKHLIPYRDSLLTWV------LKENLGGNSKTCMIACISPIDLEES--LSTLRYATTAKE 309
Query: 250 LRIMKAMG-LAPDLPEDLYYLIKKAVAMRKHLERNRKDKDS 369
+++ M + P++ ED+ ++ A + RK LE + + S
Sbjct: 310 IKLRATMNEIVPNINEDMKAAVEAAASSRKELEMLKSEMSS 350
>UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7;
Eurotiomycetidae|Rep: Ribosomal protein S15, putative -
Aspergillus clavatus
Length = 306
Score = 33.9 bits (74), Expect = 1.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 307 LIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNW 453
L K + + +HL+ KDK +K L L+ + +L RY + K P W
Sbjct: 238 LTAKIINLSRHLQSTNKDKHNKRNLRLLVHKRQKLLRYLRKKERGGPRW 286
>UniRef50_Q6D8R0 Cluster: Putative membrane protein; n=1;
Pectobacterium atrosepticum|Rep: Putative membrane
protein - Erwinia carotovora subsp. atroseptica
(Pectobacterium atrosepticum)
Length = 458
Score = 33.1 bits (72), Expect = 2.9
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 338 CFLMATAFL-IR*YKSSGRSGARPIAFMIRRIFLPVTNLTCAT 213
CF +AT ++ + K S R+GA +AF I +FL LT AT
Sbjct: 173 CFFLATKYIPVATTKESSRTGAYEVAFPILMLFLVAFMLTTAT 215
>UniRef50_A5V7X6 Cluster: TonB-dependent receptor precursor; n=1;
Sphingomonas wittichii RW1|Rep: TonB-dependent receptor
precursor - Sphingomonas wittichii RW1
Length = 818
Score = 33.1 bits (72), Expect = 2.9
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 58 GKGISQS-ALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVR 228
G+G++ + YR + PTW + K IF L GL + RD++G+ +R
Sbjct: 708 GEGLNLTFRADYRITGPTWFSTVQNQTKRSIFDLFFPGLGTGEYAKSRRDAYGILDLR 765
>UniRef50_Q58MZ4 Cluster: T4-like baseplate tail tube cap; n=1;
Cyanophage P-SSM2|Rep: T4-like baseplate tail tube cap -
Cyanophage P-SSM2
Length = 386
Score = 33.1 bits (72), Expect = 2.9
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 167 PFLPSLKICSLTSSAVSFNQVGTLRRYGSADWD 69
PFL S K C+LTS +V++ GT YG+ D
Sbjct: 322 PFLNSFKPCALTSFSVNYTGAGTYASYGTGGDD 354
>UniRef50_Q3A384 Cluster: Predicted PTS family phosphotransferase,
mannose-specific enzyme IIC; n=1; Pelobacter
carbinolicus DSM 2380|Rep: Predicted PTS family
phosphotransferase, mannose-specific enzyme IIC -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 232
Score = 32.7 bits (71), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 9 IGDIIKSRQYGSYART-WQGYIPVGAAVPP 95
+GD+ Q G++ W G IP+GAA+PP
Sbjct: 43 MGDVATGLQIGAFLELLWLGRIPIGAAIPP 72
>UniRef50_A2QE31 Cluster: Remark: alternate name for S. cerevisiae
MRPS28: YDR337w. precursor; n=1; Aspergillus niger|Rep:
Remark: alternate name for S. cerevisiae MRPS28:
YDR337w. precursor - Aspergillus niger
Length = 280
Score = 32.7 bits (71), Expect = 3.8
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 307 LIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNW 453
L K + + +HL+ +KD+ +K L L+ + +L RY + K P W
Sbjct: 212 LTAKIMNLSRHLQTTKKDRHNKRNLRLLVHKRQKLLRYLRRKERGGPRW 260
>UniRef50_Q5P8U4 Cluster: Helicase/SNF2 family domain protein; n=1;
Azoarcus sp. EbN1|Rep: Helicase/SNF2 family domain
protein - Azoarcus sp. (strain EbN1) (Aromatoleum
aromaticum (strain EbN1))
Length = 883
Score = 32.3 bits (70), Expect = 5.1
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 139 EQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVT-GKKILRIMKAMGLAPDLPEDLYYLI 312
+++ +L + G T S V LR+ H V + + +K+ IM A+G A D PEDL L+
Sbjct: 563 QRVGRLNRYGQTQSVEVVSLRNPHTVESMIWEKLEEKLGNIMLALGSAMDEPEDLLQLV 621
>UniRef50_A3VN55 Cluster: 3-dehydroquinate synthase; n=3;
Alphaproteobacteria|Rep: 3-dehydroquinate synthase -
Parvularcula bermudensis HTCC2503
Length = 371
Score = 32.3 bits (70), Expect = 5.1
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +1
Query: 241 KKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 396
K++ R++ GL P P+D+ LI A R +++++K + + RL+L+E+
Sbjct: 291 KRVERMIADSGL-PTRPQDIPGLITSAAEQRAFMQQDKKVEAGQLRLVLLEA 341
>UniRef50_A1V9P0 Cluster: ComEC/Rec2-related protein; n=2;
Desulfovibrio vulgaris subsp. vulgaris|Rep:
ComEC/Rec2-related protein - Desulfovibrio vulgaris
subsp. vulgaris (strain DP4)
Length = 979
Score = 32.3 bits (70), Expect = 5.1
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 49 HAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 216
+A G G++ +ALP S P W+ A V + + GL ++ +MLRD H V
Sbjct: 60 YAAGWGVALAALPETPSAPAWVTGKAQRVTGIVDDV--DGLPDGRLRIMLRDVHPV 113
>UniRef50_A5CDA2 Cluster: Putative uncharacterized protein; n=1;
Orientia tsutsugamushi Boryong|Rep: Putative
uncharacterized protein - Orientia tsutsugamushi (strain
Boryong) (Rickettsia tsutsugamushi)
Length = 634
Score = 31.5 bits (68), Expect = 8.9
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Frame = +1
Query: 64 GISQSALPYRRSVPTWLKLTADDVKE---QIFKLGKKGLTPSQIGVMLRDSHGVAQVRFV 234
G+S S + + +PT LTAD+VKE IF+ + + V + D H + R++
Sbjct: 347 GLSSSNIKHSTELPTLGSLTADEVKENFLSIFQFKVNNILGIKPTVPIHDLHLIELTRYL 406
Query: 235 TGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILV-ESRIHRL 411
L ++ + GL YLI V ++ + ++++ D+ L+ E + +
Sbjct: 407 YVNAPL-VLYSEGLKFLAESKAIYLINAGV-IKANSDQSQAMIDTMLSNFLIPEQFVVKY 464
Query: 412 ARYYKT 429
YY T
Sbjct: 465 GGYYTT 470
>UniRef50_A4SA99 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 317
Score = 31.5 bits (68), Expect = 8.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 27 SRQYGSYARTWQGYIPVGAAVPPQCPY 107
S +YG A TW+G IP A + P PY
Sbjct: 114 STEYGKTADTWEGAIPEEAPLAPVSPY 140
>UniRef50_A7SJ57 Cluster: Predicted protein; n=2; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 261
Score = 31.5 bits (68), Expect = 8.9
Identities = 21/82 (25%), Positives = 39/82 (47%)
Frame = +1
Query: 181 QIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKD 360
+ G ++ H A+ F T +I++ ++ M A ++ YY A + ERN++D
Sbjct: 92 EYGDKQKERHKAAKDEFTTTAEIVQTIQTMTAALTKAKETYY------ARCQEFERNKRD 145
Query: 361 KDSKFRLILVESRIHRLARYYK 426
S L E+++ + A YK
Sbjct: 146 GTSTKELEKAEAKMKKAAEEYK 167
>UniRef50_Q8SUV1 Cluster: Putative uncharacterized protein
ECU07_1670; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU07_1670 - Encephalitozoon
cuniculi
Length = 932
Score = 31.5 bits (68), Expect = 8.9
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 136 KEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFV-TGKKILRIMK 264
K +I KLG +GL +IG +++ + F+ TGK++LR+ +
Sbjct: 472 KNKIVKLGPEGLETIEIGFSIKEIEADERHLFILTGKRVLRVYR 515
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,521,420
Number of Sequences: 1657284
Number of extensions: 9488661
Number of successful extensions: 25771
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 25140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25762
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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