Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H07
         (455 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles ...   258   5e-71
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   3.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   3.9  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    22   8.9  

>U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S13 mRNA, complete
           cds. ).
          Length = 151

 Score =  258 bits (633), Expect = 5e-71
 Identities = 118/139 (84%), Positives = 133/139 (95%)
 Frame = +1

Query: 37  MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 216
           MGRMHAPGKGIS+SALPYRRSVP+WLKL+A+DVKEQI KLGKKG+TPSQIG++LRDSHGV
Sbjct: 1   MGRMHAPGKGISKSALPYRRSVPSWLKLSAEDVKEQIKKLGKKGMTPSQIGIILRDSHGV 60

Query: 217 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 396
           AQVRFV G K+LRIMKA+GL PD+PEDLY+LIKKAV++RKHLERNRKD DSKFRLIL+ES
Sbjct: 61  AQVRFVNGNKVLRIMKAVGLKPDIPEDLYFLIKKAVSIRKHLERNRKDIDSKFRLILIES 120

Query: 397 RIHRLARYYKTKSVLPPNW 453
           RIHRLARYYK K+VLPPNW
Sbjct: 121 RIHRLARYYKIKAVLPPNW 139


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +1

Query: 211 GVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 318
           G++ V+F+T ++   I  +MG+   L  D  Y+ ++
Sbjct: 443 GMSTVKFITYQEASEISGSMGVGWSLQVDCVYIDRR 478


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +1

Query: 211 GVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 318
           G++ V+F+T ++   I  +MG+   L  D  Y+ ++
Sbjct: 444 GMSTVKFITYQEASEISGSMGVGWSLQVDCVYIDRR 479


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 112 LKLTADDVKEQIFKL 156
           LKL ADDVK Q+  L
Sbjct: 95  LKLAADDVKGQVESL 109


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,176
Number of Sequences: 2352
Number of extensions: 10439
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)