Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_H05
(331 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0072 - 502785-504038 29 0.89
11_04_0221 + 15021145-15022497 29 1.2
06_01_0336 + 2427017-2427121,2427585-2427662,2427889-2427960,242... 28 1.5
10_08_1039 - 22488405-22489088,22490827-22490927,22491038-22491224 28 2.0
09_06_0236 - 21781508-21783043,21783307-21783504 27 2.7
01_05_0438 + 22142646-22143659,22144319-22144858 27 3.6
09_04_0702 - 19587943-19588168,19588423-19588525,19588809-195889... 27 4.7
08_01_0695 + 6148873-6150051 27 4.7
08_01_0081 - 574119-575204,575794-576191,576321-576382,576581-57... 27 4.7
06_03_1406 - 29949367-29949556,29949753-29949837,29950625-299507... 27 4.7
05_04_0259 + 19494629-19495394,19495408-19495949 27 4.7
05_04_0019 + 17197271-17197445,17197937-17198067,17198129-171981... 27 4.7
08_02_0875 + 22103903-22106293 26 6.2
04_04_0765 - 27910189-27912393,27912521-27912598 26 6.2
01_05_0705 + 24424457-24424948,24425520-24425624,24426097-244262... 26 6.2
12_02_0780 + 23094989-23095380,23096132-23096573,23096687-230973... 26 8.3
10_08_0267 - 16333239-16333820,16333904-16334842,16334920-163351... 26 8.3
09_05_0018 - 20098965-20099705 26 8.3
05_07_0257 + 28719980-28720220,28721412-28721455,28722521-287225... 26 8.3
05_04_0257 + 19487757-19489070 26 8.3
03_02_0504 - 8976973-8979414 26 8.3
02_03_0313 - 17590109-17590148,17590254-17590382,17590479-175906... 26 8.3
01_01_0077 - 585670-585787,585921-586687 26 8.3
>02_01_0072 - 502785-504038
Length = 417
Score = 29.1 bits (62), Expect = 0.89
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 33 ISDIADTSGLSIKARVPINLRRGACESHPVSPPSQMQRTAP 155
+S + S ++ A VP R A + PV+PP Q+Q AP
Sbjct: 231 MSSVLVFSMWALVAAVPCQDRSSAATNPPVAPPKQVQWAAP 271
>11_04_0221 + 15021145-15022497
Length = 450
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 213 VPVWDSPGREAPGNTH*NPPGPSAAFGMG 127
V WDSP R+AP T PP ++ +G
Sbjct: 327 VAEWDSPARDAPRTTPPPPPPVHVSYHLG 355
>06_01_0336 +
2427017-2427121,2427585-2427662,2427889-2427960,
2428105-2428671,2428822-2428935,2431308-2432246
Length = 624
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 28 LAYQISPTPAVLASRPGFLSTCDAVLAKATPCRP 129
LA+ S P ++ RP FL T A +TP P
Sbjct: 374 LAFDASSKPPLIGGRPFFLPTAAAAAITSTPSYP 407
>10_08_1039 - 22488405-22489088,22490827-22490927,22491038-22491224
Length = 323
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -1
Query: 184 SARKYPLKPPGAVRCIWDGGDTGWLSQAPRRKLIGTLALMLRPLVSAISDMQV 26
S+ YP KP IWDG + W + R K+ A P + SD+ V
Sbjct: 181 SSGDYPAKPMSVYATIWDG--SAWATDGGRHKVDYAYA----PFTAVFSDLVV 227
>09_06_0236 - 21781508-21783043,21783307-21783504
Length = 577
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = -1
Query: 313 DGGKCIYALPLSIVFEGSESPNKIDKGARSDELRASVGLTRA*SARKYPLKP 158
DGG+ LPL +V + ++ P GAR EL + R AR YP +P
Sbjct: 139 DGGEVRAPLPLLVVIDDADKPT----GARVGELEYEQLVARGDPAR-YPPRP 185
>01_05_0438 + 22142646-22143659,22144319-22144858
Length = 517
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 71 GQGSYQLATRCLRKPPRVAPIPNAADGPGGF 163
G G Y TRC V+P P + G GG+
Sbjct: 405 GFGPYAATTRCSAATAAVSPDPRLSAGSGGW 435
>09_04_0702 -
19587943-19588168,19588423-19588525,19588809-19588923,
19589061-19589086,19589178-19589398,19589493-19589608,
19589695-19589953,19590052-19590139,19590236-19590307,
19590401-19590476,19590746-19590809,19591139-19591259,
19592391-19592451,19592682-19592828
Length = 564
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/41 (26%), Positives = 17/41 (41%)
Frame = -3
Query: 194 PGVKRPEIPTKTPRGRPLHLGWGRHGVAFASTASQVDRNPG 72
PG + PE R H+GW H + + + +N G
Sbjct: 314 PGTQDPEDVAAAARMNDFHIGWYMHPLVYGDYPPVMRKNVG 354
>08_01_0695 + 6148873-6150051
Length = 392
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 52 PAVLASRPGFLSTC-DAVLAKATPCRPHPKC 141
PA LAS P F S C ++ A A+PC P C
Sbjct: 40 PASLASLPSFCSACFRSLSAAASPC---PSC 67
>08_01_0081 -
574119-575204,575794-576191,576321-576382,576581-576653,
576754-576824,576961-577148,577230-577377,577465-577503,
577601-577656,577745-577798,577900-578003,578117-578217,
578726-578796,578912-578968,579306-579422,579653-579682
Length = 884
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 197 HPGVKRPEIPTKTPRGRPLH-LGWGRHGVAFA 105
H G+ PE KT +G +H GWG+HG +A
Sbjct: 765 HEGM--PEAAFKTAKG--IHDAGWGKHGFGYA 792
>06_03_1406 -
29949367-29949556,29949753-29949837,29950625-29950791,
29951232-29952049
Length = 419
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 4 ILHSKKLRLAYQISPTPAVLASRPGFLSTCDAVLAKAT 117
I +SK + + + P VLAS GF CDAV T
Sbjct: 303 IANSKAGKKFFNLLPGEIVLASLDGFGKICDAVEVAGT 340
>05_04_0259 + 19494629-19495394,19495408-19495949
Length = 435
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 19 KLRLAYQISPTPAVLASRPGFLSTCDA 99
KL L P P A+ PGFL TC A
Sbjct: 145 KLSLYTTCRPMPVPRATAPGFLFTCGA 171
>05_04_0019 +
17197271-17197445,17197937-17198067,17198129-17198164,
17198196-17198333,17198503-17198601,17198750-17199124
Length = 317
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +1
Query: 73 PGFLSTCDAVLAKATPCRPHPKCSGRPRGVLVGISGRFTP 192
P + A A +P P P G G L G++GR P
Sbjct: 273 PAACTDSAAAAAADSPVSPEPPRQGAAGGFLCGLTGRANP 312
>08_02_0875 + 22103903-22106293
Length = 796
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +3
Query: 96 RGACESHPVSPPSQMQRTAPGG--FSGYFRALHARVSPT 206
RG C S P PP+ R G FS + A R++ T
Sbjct: 175 RGVCSSGPGFPPNSCNRKLVGARFFSAGYEATSGRMNET 213
>04_04_0765 - 27910189-27912393,27912521-27912598
Length = 760
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 113 PPRVAPIPNAADGPG 157
PPRV+P+P +A G G
Sbjct: 557 PPRVSPVPPSASGAG 571
>01_05_0705 +
24424457-24424948,24425520-24425624,24426097-24426207,
24426675-24426857,24427066-24427192,24427336-24427397,
24427638-24427724,24428703-24428789,24429210-24429323,
24429507-24429635,24429834-24429896,24430333-24430494,
24430611-24430729,24430786-24431794
Length = 949
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 71 GQGSYQLATRCLRKPPRVAPIPNAADGPG 157
G+ + L++ + PPR+AP P+A+ G G
Sbjct: 889 GRSTGSLSSSTTQGPPRLAPPPSASVGRG 917
>12_02_0780 +
23094989-23095380,23096132-23096573,23096687-23097311,
23098240-23098280,23098371-23098439,23098779-23098879,
23099422-23099500,23099946-23100044,23100123-23100191,
23100283-23100332,23100416-23100497,23100997-23101091,
23101263-23101395
Length = 758
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 84 INLRRGACESHPVSPPSQMQRTAPGGFSGYFRA 182
++ RRGA P PP +R + GGF G RA
Sbjct: 44 VSPRRGAAPPPPHQPPLPARRLS-GGFEGGARA 75
>10_08_0267 -
16333239-16333820,16333904-16334842,16334920-16335172,
16336837-16337063,16338189-16339388
Length = 1066
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +2
Query: 167 WVFPGASRPGESHT-GTELVTPCT 235
W F GA RPG + T +++ CT
Sbjct: 291 WAFAGAPRPGSTKTVRAQIIEQCT 314
>09_05_0018 - 20098965-20099705
Length = 246
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 166 LKPPGAVRCIWDGGDTG 116
++PP A +WD GD G
Sbjct: 222 MEPPPAATALWDNGDEG 238
>05_07_0257 +
28719980-28720220,28721412-28721455,28722521-28722590,
28722693-28722816,28723420-28724060,28725100-28725364,
28725434-28725713,28726042-28726209,28726867-28727358,
28727432-28727689
Length = 860
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -1
Query: 298 IYALPLSIVFEGSESPNKIDKGARSDELRASVGLTRA*S---ARKYPLKPPGAVRCIWDG 128
+++LP S V + + N +K + +D + L + A+ PL+PP V+ W G
Sbjct: 135 LHSLPKSSVSDSVKESNPTEKISAADHATINDSLILSSGQADAKSTPLQPPSQVKHGWGG 194
>05_04_0257 + 19487757-19489070
Length = 437
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 22 LRLAYQISPTPAVLASRPGFLSTCDA 99
L L P P LA+ P FL TC A
Sbjct: 144 LSLPTTFRPAPGPLATAPAFLFTCGA 169
>03_02_0504 - 8976973-8979414
Length = 813
Score = 25.8 bits (54), Expect = 8.3
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2
Query: 68 QGQGSYQLATRCLRKPPRVAPIPNAADGPGGF*WVFPGASRPGES 202
+GQGS+Q A RCL PP + + PG FP P S
Sbjct: 237 EGQGSFQPAKRCL--PPWSLGVLDGEQVPGRVFEDFPHHPPPPRS 279
>02_03_0313 -
17590109-17590148,17590254-17590382,17590479-17590612,
17590779-17590841,17590920-17591070,17593372-17593424,
17593483-17593629,17593839-17594163,17594240-17594409,
17595252-17595453,17596065-17596273,17597051-17597260,
17597360-17597489,17599664-17600402,17600411-17600531
Length = 940
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -3
Query: 161 TPRGRPLHLGWGRHGVAFASTASQVDRNPGLDAKTAGVGDI*YASLS 21
TP P+ WG A A +V +P A TA D+ AS S
Sbjct: 116 TPHNSPVGARWGTINSAIAMEDHRVASSPFPSATTAAARDLPAASSS 162
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 RLAYQISPTPAVLASRPGFLSTCDAVLAKATPC 123
R A I+ PA+L++ P +A A A PC
Sbjct: 35 RAALAIAAAPAILSATPAPSRAQEAAAAAAAPC 67
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,341,513
Number of Sequences: 37544
Number of extensions: 278071
Number of successful extensions: 884
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 447336660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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