Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H05
         (331 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    23   1.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   5.1  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    20   8.9  

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 194 PGVKRPEIPTKTPRGRPLHL 135
           PG   PE+  K P G+P+ +
Sbjct: 76  PGYLSPEVLKKEPYGKPVDI 95


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 4   ILHSKKLRLAYQIS 45
           ++H+K  RL YQIS
Sbjct: 435 LVHTKNGRLKYQIS 448


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +2

Query: 110 KPPRVAPIPNAA 145
           +PPR+  +PN +
Sbjct: 90  QPPRITSVPNTS 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,061
Number of Sequences: 438
Number of extensions: 2656
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)