Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H04
         (357 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5A3W4 Cluster: BcepGomrgp75; n=1; Burkholderia phage B...    35   0.48 
UniRef50_A5HIJ5 Cluster: Cysteine protease Cp5; n=6; Magnoliophy...    33   1.5  
UniRef50_Q12476 Cluster: Protein AIR2; n=2; Saccharomyces cerevi...    33   1.9  
UniRef50_Q2T4P1 Cluster: Polyketide synthase, putative; n=1; Bur...    31   4.4  
UniRef50_A3DBY0 Cluster: Metallophosphoesterase; n=1; Clostridiu...    31   4.4  
UniRef50_P17970 Cluster: Potassium voltage-gated channel protein...    31   4.4  
UniRef50_UPI0000F1DDC7 Cluster: PREDICTED: hypothetical protein;...    31   5.9  
UniRef50_Q2JQ39 Cluster: Putative uncharacterized protein; n=1; ...    31   7.7  

>UniRef50_A5A3W4 Cluster: BcepGomrgp75; n=1; Burkholderia phage
           BcepGomr|Rep: BcepGomrgp75 - Burkholderia phage BcepGomr
          Length = 90

 Score = 34.7 bits (76), Expect = 0.48
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +1

Query: 73  TATENRRAPPPPYVSVEAQPVNVVTSSKYYDSYTCCGIFPL 195
           + +  R APPPP      QPV VVT +K  DS+ C  I P+
Sbjct: 17  SCSATRGAPPPPDPVCPEQPVKVVTKTKIVDSF-CDTISPI 56


>UniRef50_A5HIJ5 Cluster: Cysteine protease Cp5; n=6;
           Magnoliophyta|Rep: Cysteine protease Cp5 - Actinidia
           deliciosa (Kiwi)
          Length = 509

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 18/51 (35%), Positives = 21/51 (41%)
 Frame = +1

Query: 94  APPPPYVSVEAQPVNVVTSSKYYDSYTCCGIFPLKTGCLIIGYYNLVSAVC 246
           +PPPP       P      S    + TCC IF     CLI G  +   AVC
Sbjct: 389 SPPPPPPPPSPSPTQCGDFSYCAATETCCCIFEFFDYCLIYGCCDYTDAVC 439


>UniRef50_Q12476 Cluster: Protein AIR2; n=2; Saccharomyces
           cerevisiae|Rep: Protein AIR2 - Saccharomyces cerevisiae
           (Baker's yeast)
          Length = 344

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +1

Query: 25  SHKLNSRNDHIHNGEGTATENRRAPPPPYVSVEAQP 132
           SHK +S+NDH H+G      +   PPP   S   QP
Sbjct: 236 SHKRHSQNDHSHSGRNKRRASNFHPPPYQKSNVIQP 271


>UniRef50_Q2T4P1 Cluster: Polyketide synthase, putative; n=1;
           Burkholderia thailandensis E264|Rep: Polyketide
           synthase, putative - Burkholderia thailandensis (strain
           E264 / ATCC 700388 / DSM 13276 /CIP 106301)
          Length = 2082

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 58  HNGEGTATENRRAPPPPYVSVEAQPVNVV-TSSKYYDSY 171
           H GE  A++ R AP  P+    A+PV ++  S +Y  +Y
Sbjct: 636 HRGEARASDTRYAPRAPHPDAAAEPVAIIGISGRYPGAY 674


>UniRef50_A3DBY0 Cluster: Metallophosphoesterase; n=1; Clostridium
           thermocellum ATCC 27405|Rep: Metallophosphoesterase -
           Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
          Length = 268

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 19  EGSHKLNSRNDHIHNGEGTATENRRAPPPPYVSV 120
           +G+HKLN+ N HI++G G      R   PP +S+
Sbjct: 231 KGTHKLNNINLHINSGLGNVCVPLRLFSPPEISI 264


>UniRef50_P17970 Cluster: Potassium voltage-gated channel protein
           Shab; n=9; Endopterygota|Rep: Potassium voltage-gated
           channel protein Shab - Drosophila melanogaster (Fruit
           fly)
          Length = 985

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +1

Query: 28  HKLNSRNDHIHNGEGTATENRRAPPPPYVSVEAQPVNVVTSSKY 159
           H  N RN ++HN  G+++E    PP  + +  A+  +++    Y
Sbjct: 781 HVANLRNSNLHNRRGSSSEQDAVPPYSFDNPNARQTSMMAMESY 824


>UniRef50_UPI0000F1DDC7 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 735

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 52  HIHNGEGTATENRRAPPPPYVSVEAQPVNVVTSSKYYDSYTCCG 183
           HIH G+G  +      PPP ++ +  PV ++  S     + CCG
Sbjct: 629 HIHYGQGAGSYC--CTPPPDIAPKLVPVPLILDSTGIPEWPCCG 670


>UniRef50_Q2JQ39 Cluster: Putative uncharacterized protein; n=1;
           Synechococcus sp. JA-2-3B'a(2-13)|Rep: Putative
           uncharacterized protein - Synechococcus sp. (strain
           JA-2-3B'a(2-13)) (Cyanobacteria bacteriumYellowstone
           B-Prime)
          Length = 850

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 15/62 (24%), Positives = 30/62 (48%)
 Frame = +2

Query: 2   WCTSRWKAHIN*IQGTTIYTMEKEPPPRIGVHRHRLMYLLRRSLSTWLQAASITTPTHAV 181
           W  S+W   I  +QG+ +  +  +P P       + +  L+ +L+TW++  S+  P    
Sbjct: 769 WEHSQWMEQIERVQGS-LAALAADPTPEALEQARQQLGNLKTNLATWMRLESLRNPYRVQ 827

Query: 182 VF 187
           V+
Sbjct: 828 VW 829


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 376,417,869
Number of Sequences: 1657284
Number of extensions: 6864944
Number of successful extensions: 18365
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18347
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11941480628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)