Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H04
         (357 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    26   0.10 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   0.54 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   2.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   5.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    20   6.6  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    20   8.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   8.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   8.7  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 26.2 bits (55), Expect = 0.10
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 44  GTTIYTMEKEPPPRIGVHRHRLMYLLRRSLSTWLQAASIT 163
           GTT  T E++P P  GV  H L  L +    + +Q  S T
Sbjct: 106 GTTALTFEEDPEPFGGVRDHNLTTLCQELGISVVQKVSHT 145



 Score = 21.4 bits (43), Expect = 2.9
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 85 SRWRFLLHCV 56
          ++WRFLL C+
Sbjct: 64 NKWRFLLQCL 73


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 0.54
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 94  APPPPYVSVEAQPVNVVTSSKYYDSYT 174
           +PPPPY  + AQP    + ++ Y   T
Sbjct: 329 SPPPPY-QISAQPTPSQSPNQIYQPVT 354


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 12/47 (25%), Positives = 19/47 (40%)
 Frame = +1

Query: 10  IKMEGSHKLNSRNDHIHNGEGTATENRRAPPPPYVSVEAQPVNVVTS 150
           I+ +  + L+     I N    A ++   PP P  + E QP     S
Sbjct: 363 IETDDFNGLSGTKYQILNAINAALKSDEIPPEPVPTPEPQPTQTTES 409


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 344 ITKVKPKLRFSVLLFGSM*LLPNII 270
           +  V+P LR  +LL  ++ LL NI+
Sbjct: 103 LQNVEPNLRPKLLLKHNLFLLDNIV 127


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 292 MDPNNNTEKRNLGLTLVIFCSI 357
           M  + N E  + G  LVI C++
Sbjct: 267 MSKSRNIEGVSFGTNLVILCAL 288


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +2

Query: 95  HRHRLMYLLRRSLSTWLQAASITTP 169
           HRH L  + R    TW     +T P
Sbjct: 333 HRHLLKGIERADSVTWNPHKLLTAP 357


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 97  PPPPYVSVEAQPVNVVT 147
           PPPP V   A+ V  V+
Sbjct: 734 PPPPRVESFAETVRTVS 750


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 151 SKYYDSYTC 177
           ++Y DSYTC
Sbjct: 1   NQYVDSYTC 9


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,498
Number of Sequences: 336
Number of extensions: 1931
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)