Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H04
         (357 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC126340-1|AAI26341.1|  176|Homo sapiens LOC440570 protein.            29   5.6  
AK125737-1|BAC86267.1|  176|Homo sapiens protein ( Homo sapiens ...    29   5.6  
U03495-1|AAA21325.1|  450|Homo sapiens transcription factor LSF-...    28   7.4  
U03494-1|AAA21324.1|  502|Homo sapiens transcription factor LSF ...    28   7.4  
BC003634-1|AAH03634.1|  502|Homo sapiens transcription factor CP...    28   7.4  
BC000585-1|AAH00585.1|  692|Homo sapiens SLCO3A1 protein protein.      28   9.8  
AF205074-1|AAG42206.1|  710|Homo sapiens organic anion transport...    28   9.8  
AF187816-1|AAG43446.1|  710|Homo sapiens PGE1 transporter protein.     28   9.8  
AB031050-1|BAA89287.1|  710|Homo sapiens organic anion transport...    28   9.8  

>BC126340-1|AAI26341.1|  176|Homo sapiens LOC440570 protein.
          Length = 176

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +1

Query: 28  HKLNSRNDHIHNGEGTATENRRAPPPPYVSVEAQPVNVVTS 150
           H+L   N   H  +G   +  RAP P +     QP +V  S
Sbjct: 38  HRLRWENGRCHRLQGKVGDQLRAPEPSWKEFPIQPASVSAS 78


>AK125737-1|BAC86267.1|  176|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43749 fis, clone TESTI2034749. ).
          Length = 176

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +1

Query: 28  HKLNSRNDHIHNGEGTATENRRAPPPPYVSVEAQPVNVVTS 150
           H+L   N   H  +G   +  RAP P +     QP +V  S
Sbjct: 38  HRLRWENGRCHRLQGKVGDQLRAPEPSWKEFPIQPASVSAS 78


>U03495-1|AAA21325.1|  450|Homo sapiens transcription factor LSF-ID
           protein.
          Length = 450

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +1

Query: 1   VVYIKMEGSHKLNSRNDHIHNGEGTATENRRAPPPPYVSVEAQP 132
           + Y+    S   NS +     GEG  + N +  PPP V+    P
Sbjct: 232 ITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLP 275


>U03494-1|AAA21324.1|  502|Homo sapiens transcription factor LSF
           protein.
          Length = 502

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +1

Query: 1   VVYIKMEGSHKLNSRNDHIHNGEGTATENRRAPPPPYVSVEAQP 132
           + Y+    S   NS +     GEG  + N +  PPP V+    P
Sbjct: 283 ITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLP 326


>BC003634-1|AAH03634.1|  502|Homo sapiens transcription factor CP2
           protein.
          Length = 502

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +1

Query: 1   VVYIKMEGSHKLNSRNDHIHNGEGTATENRRAPPPPYVSVEAQP 132
           + Y+    S   NS +     GEG  + N +  PPP V+    P
Sbjct: 283 ITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLP 326


>BC000585-1|AAH00585.1|  692|Homo sapiens SLCO3A1 protein protein.
          Length = 692

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = -2

Query: 143 TTLTGCASTDT*GGGGARLFSVAVPSPLCIWSFLEFNLC 27
           T LTGCA   T     A +     PSP C  +FL F LC
Sbjct: 504 TNLTGCACLTTVPAENATVVPGKCPSPGCQEAFLTF-LC 541


>AF205074-1|AAG42206.1|  710|Homo sapiens organic anion transporter
           polypeptide-related protein 3 protein.
          Length = 710

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = -2

Query: 143 TTLTGCASTDT*GGGGARLFSVAVPSPLCIWSFLEFNLC 27
           T LTGCA   T     A +     PSP C  +FL F LC
Sbjct: 504 TNLTGCACLTTVPAENATVVPGKCPSPGCQEAFLTF-LC 541


>AF187816-1|AAG43446.1|  710|Homo sapiens PGE1 transporter protein.
          Length = 710

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = -2

Query: 143 TTLTGCASTDT*GGGGARLFSVAVPSPLCIWSFLEFNLC 27
           T LTGCA   T     A +     PSP C  +FL F LC
Sbjct: 504 TNLTGCACLTTVPAENATVVPGKCPSPGCQEAFLTF-LC 541


>AB031050-1|BAA89287.1|  710|Homo sapiens organic anion transporter
           OATP-D protein.
          Length = 710

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = -2

Query: 143 TTLTGCASTDT*GGGGARLFSVAVPSPLCIWSFLEFNLC 27
           T LTGCA   T     A +     PSP C  +FL F LC
Sbjct: 504 TNLTGCACLTTVPAENATVVPGKCPSPGCQEAFLTF-LC 541


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,357,161
Number of Sequences: 237096
Number of extensions: 1130778
Number of successful extensions: 2444
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2444
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)