Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_H04
(357 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g24670.2 68417.m03532 alliinase family protein contains Pfam ... 28 1.6
At4g24670.1 68417.m03531 alliinase family protein contains Pfam ... 28 1.6
At1g78270.1 68414.m09121 UDP-glucose glucosyltransferase, putati... 28 2.1
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 27 2.8
At4g32530.1 68417.m04631 vacuolar ATP synthase, putative / V-ATP... 27 3.7
At2g39050.1 68415.m04800 hydroxyproline-rich glycoprotein family... 27 3.7
At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C su... 27 3.7
At2g33000.1 68415.m04044 ubiquitin-associated (UBA)/TS-N domain-... 27 4.9
At5g10060.1 68418.m01165 expressed protein 26 6.4
At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 23 6.9
At3g18830.1 68416.m02391 mannitol transporter, putative similar ... 26 8.5
At4g08410.1 68417.m01390 proline-rich extensin-like family prote... 23 9.1
>At4g24670.2 68417.m03532 alliinase family protein contains Pfam
profiles: PF04864 allinase C-terminal domain, PF04863
alliinase EGF-like domain
Length = 440
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 121 EAQPVNVVTSSKYYDSYTCCGIFPLKTGCLIIGYY 225
++ P+NVV+++ YY +Y PL T CL G Y
Sbjct: 170 DSGPINVVSATPYYSTY------PLITDCLKSGLY 198
>At4g24670.1 68417.m03531 alliinase family protein contains Pfam
profiles: PF04864 allinase C-terminal domain, PF04863
alliinase EGF-like domain
Length = 440
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 121 EAQPVNVVTSSKYYDSYTCCGIFPLKTGCLIIGYY 225
++ P+NVV+++ YY +Y PL T CL G Y
Sbjct: 170 DSGPINVVSATPYYSTY------PLITDCLKSGLY 198
>At1g78270.1 68414.m09121 UDP-glucose glucosyltransferase, putative
similar to UDP-glucose glucosyltransferase GI:3928543
from [Arabidopsis thaliana]
Length = 489
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 73 FLLHCVYGRSLNSIYVSLPS*CTP 2
FL HC + +L S+Y +P C P
Sbjct: 377 FLTHCGWNSTLESLYAGVPMICWP 400
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 27.5 bits (58), Expect = 2.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 55 IHNGEGTATENRRAPPPPYVSVE 123
IHN + + ++PP P++SVE
Sbjct: 79 IHNNDDQIPQTEQSPPAPWISVE 101
>At4g32530.1 68417.m04631 vacuolar ATP synthase, putative /
V-ATPase, putative SP|P23968 Vacuolar ATP synthase 22
kDa proteolipid subunit (EC 3.6.3.14) {Saccharomyces
cerevisiae}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 180
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 142 VTSSKYYDSYTCCGIFPLKTGCLIIGYYNLVSAVC 246
V SSK YD+ + + + +I+G+ NLV +C
Sbjct: 94 VPSSKMYDAESLRAGYAIFASGIIVGFANLVCGLC 128
>At2g39050.1 68415.m04800 hydroxyproline-rich glycoprotein family
protein contains QXW lectin repeat domain, Pfam:PF00652
Length = 317
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 52 HIHNGEGTATENRRA--PPPPYVSVEAQPVNVVTSSKYYDSY 171
H H+ ++R++ PPP+V QP + S ++D Y
Sbjct: 8 HRHHQRDDGEDDRQSFGVPPPHVDAPPQPHGLYQSQPHFDPY 49
>At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C
subunit family protein similar to SP|P23968 Vacuolar ATP
synthase 22 kDa proteolipid subunit (EC 3.6.3.14)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00137: ATP synthase subunit C
Length = 178
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 142 VTSSKYYDSYTCCGIFPLKTGCLIIGYYNLVSAVC 246
V SSK YD+ + + + +I+G+ NLV +C
Sbjct: 92 VPSSKMYDAESLRAGYAIFASGIIVGFANLVCGLC 126
>At2g33000.1 68415.m04044 ubiquitin-associated (UBA)/TS-N
domain-containing protein-related contains weak hit to
Pfam F00627: UBA/TS-N domain; supported by tandem
duplication of ubiquitin-associated (UBA)/TS-N domain
protein (GI:2924790) (TIGR_Ath1:At2g33010) [Arabidopsis
thaliana]
Length = 508
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 76 ATENRRAPPPPYVSVEAQPVNVVTSS 153
A N+ +P PP ++VE+ PVN ++S
Sbjct: 55 ACRNQTSPFPPSLTVESTPVNANSAS 80
>At5g10060.1 68418.m01165 expressed protein
Length = 469
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 232 PSYNNR*SSIPFSEGKYH 179
PSYNN + P ++G+YH
Sbjct: 374 PSYNNSQNQTPTTQGQYH 391
>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 895
Score = 23.4 bits (48), Expect(2) = 6.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 94 APPPPYVSVEAQPV 135
+PPPPY S +PV
Sbjct: 215 SPPPPYYSPSPKPV 228
Score = 23.0 bits (47), Expect(2) = 8.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 97 PPPPYVSVEAQPV 135
PPPPY S +PV
Sbjct: 316 PPPPYYSPSPKPV 328
Score = 21.0 bits (42), Expect(2) = 6.9
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +1
Query: 91 RAPPPPYV 114
++PPPPYV
Sbjct: 180 KSPPPPYV 187
Score = 21.0 bits (42), Expect(2) = 8.9
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +1
Query: 91 RAPPPPYV 114
++PPPPYV
Sbjct: 305 KSPPPPYV 312
>At3g18830.1 68416.m02391 mannitol transporter, putative similar to
mannitol transporter [Apium graveolens var. dulce]
GI:12004316; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 539
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +1
Query: 70 GTATENRRAPPPPYVSVEAQPVNVVTSSKYYDSYTCCGIFPLKTGCLIIGY 222
G ENR AP PP V + V K + C I T +++GY
Sbjct: 3 GATPENRTAPSPPPVKHVPESVLPAKPPKRNNYAFACAILASMTS-ILLGY 52
>At4g08410.1 68417.m01390 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 707
Score = 22.6 bits (46), Expect(2) = 9.1
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 85 NRRAPPPPYV 114
N ++PPPPYV
Sbjct: 272 NYKSPPPPYV 281
Score = 22.6 bits (46), Expect(2) = 9.1
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 85 NRRAPPPPYV 114
N ++PPPPYV
Sbjct: 322 NYKSPPPPYV 331
Score = 21.4 bits (43), Expect(2) = 9.1
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 91 RAPPPPYVSVEAQP 132
++PPPPYV P
Sbjct: 299 KSPPPPYVYSSPPP 312
Score = 21.4 bits (43), Expect(2) = 9.1
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 91 RAPPPPYVSVEAQP 132
++PPPPYV P
Sbjct: 349 KSPPPPYVYSSPPP 362
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,193,818
Number of Sequences: 28952
Number of extensions: 154168
Number of successful extensions: 767
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 459356736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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