Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_H02
(580 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK131302-1|BAD18470.1| 626|Homo sapiens protein ( Homo sapiens ... 66 6e-11
AY184206-1|AAO27774.1| 3212|Homo sapiens nesprin-1 beta 2 protein. 31 3.9
AY061755-1|AAL33798.1| 3321|Homo sapiens nesprin-1 beta protein. 31 3.9
AL450401-4|CAI40730.1| 2963|Homo sapiens spectrin repeat contain... 31 3.9
AL450401-3|CAI40729.1| 3321|Homo sapiens spectrin repeat contain... 31 3.9
AL357081-1|CAI41322.1| 3321|Homo sapiens spectrin repeat contain... 31 3.9
AL138832-5|CAI42787.1| 2963|Homo sapiens spectrin repeat contain... 31 3.9
AL138832-4|CAI42786.1| 3321|Homo sapiens spectrin repeat contain... 31 3.9
AL078582-5|CAI42287.1| 2963|Homo sapiens spectrin repeat contain... 31 3.9
AL078582-3|CAI42284.1| 3321|Homo sapiens spectrin repeat contain... 31 3.9
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 31 3.9
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 31 3.9
AK128824-1|BAC87625.1| 706|Homo sapiens protein ( Homo sapiens ... 30 5.1
AM293589-1|CAL25321.1| 430|Homo sapiens 5-hydroxytryptamine rec... 29 9.0
AJ295279-1|CAC17137.1| 362|Homo sapiens MHC class I antigen pro... 29 9.0
AF169255-1|AAF03691.1| 441|Homo sapiens 5-hydroxytryptamine 3 r... 29 9.0
AF080582-1|AAD12242.1| 441|Homo sapiens 5-hydroxytryptamine 3 r... 29 9.0
>AK131302-1|BAD18470.1| 626|Homo sapiens protein ( Homo sapiens
cDNA FLJ16275 fis, clone NT2RI2027157, moderately
similar to Mouse SDR2 mRNA. ).
Length = 626
Score = 66.5 bits (155), Expect = 6e-11
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
Frame = +3
Query: 102 PTGAPPSACFDMIPGHAADVQTVPAPYTITTAVSSVKAGHSIDVVISGKTPEDKMAGILL 281
P G +C MIP H Q+VP + I + + + G I+V +SG G LL
Sbjct: 24 PNGKVTQSCHGMIPEHGHSPQSVPV-HDIYVSQMTFRPGDQIEVTLSGHP----FKGFLL 78
Query: 282 EARQGDKI----VGTWTVSPDDTFSQPLNCGE-PNNAVTHKMHAKELDRQTVSYPWTAPK 446
EAR + + +G++T+ D SQ L C + +AV+H+ +K+ + + W AP
Sbjct: 79 EARNAEDLNGPPIGSFTLI-DSEVSQLLTCEDIQGSAVSHRSASKKTE---IKVYWNAPS 134
Query: 447 DLEGDVVFKVTIVKSYAVFWVR 512
F VT+V+ Y ++WV+
Sbjct: 135 SAPNHTQFLVTVVEKYKIYWVK 156
>AY184206-1|AAO27774.1| 3212|Homo sapiens nesprin-1 beta 2 protein.
Length = 3212
Score = 30.7 bits (66), Expect = 3.9
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 318 TVSPDDTFSQPLNCGEPNNAVTHKMHAKELDR-QTVSYPWTAPKDLEGDVVFKVTIVKSY 494
++S D SQ GE + T+KM +KEL R +T+ WT + D++ + K
Sbjct: 1174 SISCSDLESQLNQLGECWLSNTNKM-SKELHRLETILKHWTRYQSESADLIHWLQSAKDR 1232
Query: 495 AVFWVRESNQAP 530
FW ++S P
Sbjct: 1233 LEFWTQQSVTVP 1244
>AY061755-1|AAL33798.1| 3321|Homo sapiens nesprin-1 beta protein.
Length = 3321
Score = 30.7 bits (66), Expect = 3.9
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 318 TVSPDDTFSQPLNCGEPNNAVTHKMHAKELDR-QTVSYPWTAPKDLEGDVVFKVTIVKSY 494
++S D SQ GE + T+KM +KEL R +T+ WT + D++ + K
Sbjct: 1283 SISCSDLESQLNQLGECWLSNTNKM-SKELHRLETILKHWTRYQSESADLIHWLQSAKDR 1341
Query: 495 AVFWVRESNQAP 530
FW ++S P
Sbjct: 1342 LEFWTQQSVTVP 1353
>AL450401-4|CAI40730.1| 2963|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 2963
Score = 30.7 bits (66), Expect = 3.9
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 318 TVSPDDTFSQPLNCGEPNNAVTHKMHAKELDR-QTVSYPWTAPKDLEGDVVFKVTIVKSY 494
++S D SQ GE + T+KM +KEL R +T+ WT + D++ + K
Sbjct: 902 SISCSDLESQLNQLGECWLSNTNKM-SKELHRLETILKHWTRYQSESADLIHWLQSAKDR 960
Query: 495 AVFWVRESNQAP 530
FW ++S P
Sbjct: 961 LEFWTQQSVTVP 972
>AL450401-3|CAI40729.1| 3321|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 3321
Score = 30.7 bits (66), Expect = 3.9
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 318 TVSPDDTFSQPLNCGEPNNAVTHKMHAKELDR-QTVSYPWTAPKDLEGDVVFKVTIVKSY 494
++S D SQ GE + T+KM +KEL R +T+ WT + D++ + K
Sbjct: 1283 SISCSDLESQLNQLGECWLSNTNKM-SKELHRLETILKHWTRYQSESADLIHWLQSAKDR 1341
Query: 495 AVFWVRESNQAP 530
FW ++S P
Sbjct: 1342 LEFWTQQSVTVP 1353
>AL357081-1|CAI41322.1| 3321|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 3321
Score = 30.7 bits (66), Expect = 3.9
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 318 TVSPDDTFSQPLNCGEPNNAVTHKMHAKELDR-QTVSYPWTAPKDLEGDVVFKVTIVKSY 494
++S D SQ GE + T+KM +KEL R +T+ WT + D++ + K
Sbjct: 1283 SISCSDLESQLNQLGECWLSNTNKM-SKELHRLETILKHWTRYQSESADLIHWLQSAKDR 1341
Query: 495 AVFWVRESNQAP 530
FW ++S P
Sbjct: 1342 LEFWTQQSVTVP 1353
>AL138832-5|CAI42787.1| 2963|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 2963
Score = 30.7 bits (66), Expect = 3.9
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 318 TVSPDDTFSQPLNCGEPNNAVTHKMHAKELDR-QTVSYPWTAPKDLEGDVVFKVTIVKSY 494
++S D SQ GE + T+KM +KEL R +T+ WT + D++ + K
Sbjct: 902 SISCSDLESQLNQLGECWLSNTNKM-SKELHRLETILKHWTRYQSESADLIHWLQSAKDR 960
Query: 495 AVFWVRESNQAP 530
FW ++S P
Sbjct: 961 LEFWTQQSVTVP 972
>AL138832-4|CAI42786.1| 3321|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 3321
Score = 30.7 bits (66), Expect = 3.9
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 318 TVSPDDTFSQPLNCGEPNNAVTHKMHAKELDR-QTVSYPWTAPKDLEGDVVFKVTIVKSY 494
++S D SQ GE + T+KM +KEL R +T+ WT + D++ + K
Sbjct: 1283 SISCSDLESQLNQLGECWLSNTNKM-SKELHRLETILKHWTRYQSESADLIHWLQSAKDR 1341
Query: 495 AVFWVRESNQAP 530
FW ++S P
Sbjct: 1342 LEFWTQQSVTVP 1353
>AL078582-5|CAI42287.1| 2963|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 2963
Score = 30.7 bits (66), Expect = 3.9
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 318 TVSPDDTFSQPLNCGEPNNAVTHKMHAKELDR-QTVSYPWTAPKDLEGDVVFKVTIVKSY 494
++S D SQ GE + T+KM +KEL R +T+ WT + D++ + K
Sbjct: 902 SISCSDLESQLNQLGECWLSNTNKM-SKELHRLETILKHWTRYQSESADLIHWLQSAKDR 960
Query: 495 AVFWVRESNQAP 530
FW ++S P
Sbjct: 961 LEFWTQQSVTVP 972
>AL078582-3|CAI42284.1| 3321|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 3321
Score = 30.7 bits (66), Expect = 3.9
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 318 TVSPDDTFSQPLNCGEPNNAVTHKMHAKELDR-QTVSYPWTAPKDLEGDVVFKVTIVKSY 494
++S D SQ GE + T+KM +KEL R +T+ WT + D++ + K
Sbjct: 1283 SISCSDLESQLNQLGECWLSNTNKM-SKELHRLETILKHWTRYQSESADLIHWLQSAKDR 1341
Query: 495 AVFWVRESNQAP 530
FW ++S P
Sbjct: 1342 LEFWTQQSVTVP 1353
>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
Length = 8749
Score = 30.7 bits (66), Expect = 3.9
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 318 TVSPDDTFSQPLNCGEPNNAVTHKMHAKELDR-QTVSYPWTAPKDLEGDVVFKVTIVKSY 494
++S D SQ GE + T+KM +KEL R +T+ WT + D++ + K
Sbjct: 6688 SISCSDLESQLNQLGECWLSNTNKM-SKELHRLETILKHWTRYQSESADLIHWLQSAKDR 6746
Query: 495 AVFWVRESNQAP 530
FW ++S P
Sbjct: 6747 LEFWTQQSVTVP 6758
>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
Length = 8797
Score = 30.7 bits (66), Expect = 3.9
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 318 TVSPDDTFSQPLNCGEPNNAVTHKMHAKELDR-QTVSYPWTAPKDLEGDVVFKVTIVKSY 494
++S D SQ GE + T+KM +KEL R +T+ WT + D++ + K
Sbjct: 6759 SISCSDLESQLNQLGECWLSNTNKM-SKELHRLETILKHWTRYQSESADLIHWLQSAKDR 6817
Query: 495 AVFWVRESNQAP 530
FW ++S P
Sbjct: 6818 LEFWTQQSVTVP 6829
>AK128824-1|BAC87625.1| 706|Homo sapiens protein ( Homo sapiens
cDNA FLJ46160 fis, clone TESTI4002141. ).
Length = 706
Score = 30.3 bits (65), Expect = 5.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 324 LRSKCRRSCHPDELPGGCRPFCLRVFC 244
LR+ C P + GGC C+RV C
Sbjct: 241 LRASVSECCVPGDAQGGCAGICVRVLC 267
>AM293589-1|CAL25321.1| 430|Homo sapiens 5-hydroxytryptamine
receptor 3 subunit B protein.
Length = 430
Score = 29.5 bits (63), Expect = 9.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 441 PKDLEGDVVFKVTIVKSYAVFWVRESNQAP 530
P + +VFK +++ Y VF V SNQ P
Sbjct: 253 PPNCRARIVFKTSVLVGYTVFRVNMSNQVP 282
>AJ295279-1|CAC17137.1| 362|Homo sapiens MHC class I antigen
protein.
Length = 362
Score = 29.5 bits (63), Expect = 9.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 458 RRCVQGHHCQELRRLLGSGIESSPVKVLSPLNHVSHHHLLD 580
R C++G + LRR L +G E+ + P HV+HH + D
Sbjct: 181 RACLEGECVEWLRRYLENGKETLQ-RADPPKTHVTHHPISD 220
>AF169255-1|AAF03691.1| 441|Homo sapiens 5-hydroxytryptamine 3
receptor B subunit protein.
Length = 441
Score = 29.5 bits (63), Expect = 9.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 441 PKDLEGDVVFKVTIVKSYAVFWVRESNQAP 530
P + +VFK +++ Y VF V SNQ P
Sbjct: 264 PPNCRARIVFKTSVLVGYTVFRVNMSNQVP 293
>AF080582-1|AAD12242.1| 441|Homo sapiens 5-hydroxytryptamine 3
receptor B subunit precursor protein.
Length = 441
Score = 29.5 bits (63), Expect = 9.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 441 PKDLEGDVVFKVTIVKSYAVFWVRESNQAP 530
P + +VFK +++ Y VF V SNQ P
Sbjct: 264 PPNCRARIVFKTSVLVGYTVFRVNMSNQVP 293
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,728,871
Number of Sequences: 237096
Number of extensions: 2358253
Number of successful extensions: 5805
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5804
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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