Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H02
         (580 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   2.2  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   2.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   3.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   3.8  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   6.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.8  

>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 164 LNISSVPWDHVEARARRCSGGVSAGKRHHRCN 69
           ++I+   +D +    R CSG +S  K    CN
Sbjct: 43  VHITKDEYDEIGRLKRTCSGDISVTKCEGFCN 74


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 164 LNISSVPWDHVEARARRCSGGVSAGKRHHRCN 69
           ++I+   +D +    R CSG +S  K    CN
Sbjct: 43  VHITKDEYDEIGRLKRTCSGDISVTKCEGFCN 74


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 220 IPLTWLSAAKHPKTKWP 270
           IP+T  +  KH KTK P
Sbjct: 210 IPVTLTTVPKHSKTKSP 226


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 506 GSGIESSPVKVLSPLNHVSHHHLLD 580
           GSGIES   +  + LN++   HL D
Sbjct: 827 GSGIESIQNRTFNGLNNLQILHLED 851


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 197 SCSDGVRRWYCLNI 156
           SCSD + RW  L +
Sbjct: 434 SCSDKIARWNVLGV 447


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 485  QELRRLLGSGIESSPVKVLSPLNHV 559
            QE+ R  G GIES+   V+    HV
Sbjct: 1175 QEMMREAGRGIESAKSYVVDVRVHV 1199


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,854
Number of Sequences: 438
Number of extensions: 3570
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)