Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_G24
         (582 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.9  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   1.9  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   1.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   5.8  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 321 NSCPRPNCRNPV 356
           N CP P C  PV
Sbjct: 87  NECPEPTCDEPV 98


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 456 QVGRPPLSRSPPQRIK 503
           QV RPP +RSP + IK
Sbjct: 113 QVARPPPARSPYEWIK 128


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 456 QVGRPPLSRSPPQRIK 503
           QV RPP +RSP + IK
Sbjct: 113 QVARPPPARSPYEWIK 128


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 204 ATLDDTLCDDHLAFICEKDPKKLQT 130
           AT+D+   D H   +  + PKK+ T
Sbjct: 642 ATIDEAASDVHQTHMRIRPPKKIPT 666


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 204 ATLDDTLCDDHLAFICEKDPKKLQT 130
           AT+D+   D H   +  + PKK+ T
Sbjct: 642 ATIDEAASDVHQTHMRIRPPKKIPT 666


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 204 ATLDDTLCDDHLAFICEKDPKKLQT 130
           AT+D+   D H   +  + PKK+ T
Sbjct: 642 ATIDEAASDVHQTHMRIRPPKKIPT 666


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 204 ATLDDTLCDDHLAFICEKDPKKLQT 130
           AT+D+   D H   +  + PKK+ T
Sbjct: 642 ATIDEAASDVHQTHMRIRPPKKIPT 666


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 354 LGFYNWDEGNYFRTLDGQTLEA 289
           +GF  WD+    R+ +G+  EA
Sbjct: 108 IGFIEWDKVEIVRSQEGRFEEA 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,576
Number of Sequences: 336
Number of extensions: 2359
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)