Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_G24
(582 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_7990| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_30134| Best HMM Match : Lectin_C (HMM E-Value=5.4e-05) 33 0.17
SB_42813| Best HMM Match : Lectin_C (HMM E-Value=4.8e-21) 32 0.39
SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_58330| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0) 29 2.8
SB_8855| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_19212| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
>SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2516
Score = 38.3 bits (85), Expect = 0.005
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Frame = -1
Query: 531 CYKFHSVGRP*SVAAAICSTEGGQPGQLINSETEAEVLRNLFAQHPAQTLTVSFDVIIRL 352
CYKF + + +A C GG ++ NS+ E L + Q + +
Sbjct: 133 CYKFSTSSKTWLIAQQDCHQSGGYLVKVDNSD-EQHFLSYMMKTVMKQAAWIGLNDRAIE 191
Query: 351 GFYNWDEGNYFRTLDGQTLEAAGYAKWAKGQPDNQFSRQKQNCGGMFRDAT---LDDTLC 181
G Y W+ N T GQ Y+ W G+P++ S ++C M+ + +D C
Sbjct: 192 GTYVWEGDN---TKLGQ-----NYSHWYSGEPNDHAS--VEDCISMYSGSLGGFWNDDYC 241
Query: 180 DDHLAFICEK 151
D A++CEK
Sbjct: 242 DTLRAYVCEK 251
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -1
Query: 282 YAKWAKGQPDNQFSRQKQNCGGMFRDATLDDTLCDDHLAFICE 154
Y W +G+P+N F + +++D +D C +FIC+
Sbjct: 73 YTNWRRGEPNN-FQDNEDCTELLYQDGLWNDDDCSKEYSFICK 114
>SB_7990| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 406
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 273 WAKGQPDNQFSRQKQNCGGM-FRDATLDDTLCDDHLAFICEK 151
W G+P+N SR +NC M + D +D LC + ++CEK
Sbjct: 109 WGYGEPNNYMSR-GENCSEMRYWDGMWNDVLCVNKYGYVCEK 149
>SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 33.5 bits (73), Expect = 0.13
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Frame = -1
Query: 531 CYKFHSVGRP*SVAAAICSTEGGQPGQLINSETEAEVLRNLFAQHPAQTLTVSF---DVI 361
CY+F+S R A +C GG+ +++ +A + TL V F
Sbjct: 1526 CYQFNSDKRNWQSARLMCQNRGGELVSILSPVEQAHI-----------TLEVGFFGLSTF 1574
Query: 360 IRLGFYNWDEGNYFRTLDGQTLEAAGYAKWAKGQPDNQFSRQKQNCGGMFRDATL----D 193
+GF++ + + DG + + W QPDN + ++C + + +
Sbjct: 1575 AWIGFHDKTIESAWEWSDGSPVR---FTNWWNYQPDNWIN--SEDCAHTYHQTSAMGRWN 1629
Query: 192 DTLCDDHLAFICEKD 148
D C ++A+IC++D
Sbjct: 1630 DISCYTNMAYICKRD 1644
>SB_30134| Best HMM Match : Lectin_C (HMM E-Value=5.4e-05)
Length = 131
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = -1
Query: 321 FRTLDGQTLEAAGYAKWAKGQPDNQFSRQKQNCGGMFRDATL----DDTLCDD--HLAFI 160
F +DG TL ++ Y+ W QPDN S +NCG L +D C++ A
Sbjct: 68 FFWVDGTTLTSSSYSAWYPPQPDN--SGGHENCGHFLLSGKLARRWNDISCNNSYQFAIA 125
Query: 159 CEK 151
C+K
Sbjct: 126 CQK 128
>SB_42813| Best HMM Match : Lectin_C (HMM E-Value=4.8e-21)
Length = 276
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Frame = -1
Query: 288 AGYAKWAKGQPDNQFSRQKQNCGGM-FR---DATLDDTLCDDH--LAFICEKDPKKL 136
A + KWAKG+P+N + ++C M FR + + +D LC + +IC+ P L
Sbjct: 208 AKFFKWAKGEPNN-YQGNTEDCVAMDFRSLSNGSYNDVLCQESSVSGYICKGSPMPL 263
>SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1662
Score = 30.7 bits (66), Expect = 0.91
Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 1/135 (0%)
Frame = -1
Query: 558 YKMDQRTNKCYKFHSVGRP*SVAAAICSTEGGQPGQLINSETEAEVLRNLFAQHPAQTLT 379
+++ Q + C+KF S RP A+ C GG I+S E + NLF
Sbjct: 1535 WEIYQANHSCFKFVSEKRPWKDASRYCQNIGGNLTS-IHSAEENVFVSNLFLIGEGNAYW 1593
Query: 378 VSFDVIIRLGFYNWDEGNYFRTLDGQTLEAAGYAKWAKGQPDNQFSRQKQNCGGMFRDA- 202
+ + + + W +G + + +WA +P + + + ++C + + +
Sbjct: 1594 IGLNDLKNEKAFVWSDGT-----------SVDFTQWAFNKPSD--NGKDKDCTYLLKQSK 1640
Query: 201 TLDDTLCDDHLAFIC 157
T D C + F+C
Sbjct: 1641 TWIDFSCANSYPFVC 1655
>SB_58330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -1
Query: 285 GYAKWAKGQPDNQFSRQKQNCGGMFRDAT---LDDTLCDDHLAFICE 154
G WA GQP + + Q+++C M + D C + L FIC+
Sbjct: 346 GRPNWAPGQPTGRSNGQEKDCVAMVMHPSPGKWHDEYCLNQLPFICK 392
>SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 577
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 537 NKCYKFHSVGRP*SVAAAICSTEGGQPGQLINSETEAEVLRNL 409
+ CY+ + P S A +C EGG + ++ +A +LRN+
Sbjct: 165 DSCYRMSYIKLPWSEAREVCKKEGGDLVSIHSAFEQAFLLRNM 207
>SB_8855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 195 DDTLCDDHLAFICEKD-PKKLQTAKIAPRT 109
+D CD +ICEKD PK++ AP T
Sbjct: 210 NDNSCDHQQGYICEKDKPKEVLATGDAPHT 239
>SB_19212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 513
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -2
Query: 164 LFVKKTRRSYKRLR*LLEPL--DSESCNYILKRYSSLF 57
+FVK+ R+SYK L+ E L DS S + + R ++LF
Sbjct: 117 IFVKEIRKSYKNLKTRSELLCGDSHSSSRFIHRMTNLF 154
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,903,351
Number of Sequences: 59808
Number of extensions: 304647
Number of successful extensions: 645
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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