Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_G23
         (483 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC109280-1|AAI09281.2|  970|Homo sapiens DNAJC6 protein protein.       29   8.6  
BC109279-1|AAI09280.2|  970|Homo sapiens DNAJC6 protein protein.       29   8.6  
BC051722-1|AAH51722.1|  442|Homo sapiens DNAJC6 protein protein.       29   8.6  
AL355487-2|CAI23548.1|  970|Homo sapiens DnaJ (Hsp40) homolog, s...    29   8.6  
AL355487-1|CAI23547.1|  913|Homo sapiens DnaJ (Hsp40) homolog, s...    29   8.6  
AL139294-3|CAI18999.1|  970|Homo sapiens DnaJ (Hsp40) homolog, s...    29   8.6  
AL139294-1|CAI18997.1|  913|Homo sapiens DnaJ (Hsp40) homolog, s...    29   8.6  
AB007942-1|BAA32318.2|  937|Homo sapiens KIAA0473 protein protein.     29   8.6  

>BC109280-1|AAI09281.2|  970|Homo sapiens DNAJC6 protein protein.
          Length = 970

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -3

Query: 403 PGLSLTVIHLGRGGAAFSPGASRALTHHCDIVHNEVYEAYY 281
           PG ++ +++  R G   SP   R L + CD++ ++ Y  ++
Sbjct: 245 PGPAIRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHF 285


>BC109279-1|AAI09280.2|  970|Homo sapiens DNAJC6 protein protein.
          Length = 970

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -3

Query: 403 PGLSLTVIHLGRGGAAFSPGASRALTHHCDIVHNEVYEAYY 281
           PG ++ +++  R G   SP   R L + CD++ ++ Y  ++
Sbjct: 245 PGPAIRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHF 285


>BC051722-1|AAH51722.1|  442|Homo sapiens DNAJC6 protein protein.
          Length = 442

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -3

Query: 403 PGLSLTVIHLGRGGAAFSPGASRALTHHCDIVHNEVYEAYY 281
           PG ++ +++  R G   SP   R L + CD++ ++ Y  ++
Sbjct: 175 PGPAIRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHF 215


>AL355487-2|CAI23548.1|  970|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 6 protein.
          Length = 970

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -3

Query: 403 PGLSLTVIHLGRGGAAFSPGASRALTHHCDIVHNEVYEAYY 281
           PG ++ +++  R G   SP   R L + CD++ ++ Y  ++
Sbjct: 245 PGPAIRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHF 285


>AL355487-1|CAI23547.1|  913|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 6 protein.
          Length = 913

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -3

Query: 403 PGLSLTVIHLGRGGAAFSPGASRALTHHCDIVHNEVYEAYY 281
           PG ++ +++  R G   SP   R L + CD++ ++ Y  ++
Sbjct: 188 PGPAIRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHF 228


>AL139294-3|CAI18999.1|  970|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 6 protein.
          Length = 970

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -3

Query: 403 PGLSLTVIHLGRGGAAFSPGASRALTHHCDIVHNEVYEAYY 281
           PG ++ +++  R G   SP   R L + CD++ ++ Y  ++
Sbjct: 245 PGPAIRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHF 285


>AL139294-1|CAI18997.1|  913|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 6 protein.
          Length = 913

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -3

Query: 403 PGLSLTVIHLGRGGAAFSPGASRALTHHCDIVHNEVYEAYY 281
           PG ++ +++  R G   SP   R L + CD++ ++ Y  ++
Sbjct: 188 PGPAIRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHF 228


>AB007942-1|BAA32318.2|  937|Homo sapiens KIAA0473 protein protein.
          Length = 937

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -3

Query: 403 PGLSLTVIHLGRGGAAFSPGASRALTHHCDIVHNEVYEAYY 281
           PG ++ +++  R G   SP   R L + CD++ ++ Y  ++
Sbjct: 212 PGPAIRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHF 252


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,823,266
Number of Sequences: 237096
Number of extensions: 943772
Number of successful extensions: 1898
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1898
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)