Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_G21
(497 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0058 + 440328-440437,440514-440733,441605-441805,441915-44... 162 1e-40
09_04_0503 - 18170645-18170858,18171029-18171222,18171419-181716... 67 8e-12
09_04_0365 - 16962608-16963174,16963301-16963486,16963824-169638... 51 4e-07
06_03_1503 - 30621089-30621170,30621258-30621438,30621462-306215... 37 0.008
07_03_1778 + 29451902-29452166,29452665-29452849,29453504-294536... 33 0.096
06_01_1186 - 10195175-10195621,10195882-10195930,10196019-101961... 30 1.2
04_04_0790 + 28083116-28083337,28083446-28083652,28083739-280838... 29 2.1
01_05_0473 - 22549178-22549532,22549612-22550576 29 2.1
03_02_0992 + 13049871-13050449 29 2.7
01_06_0989 - 33618841-33619161 29 2.7
07_03_0784 + 21505204-21505950 28 4.8
07_03_0781 - 21477797-21478549 28 4.8
07_03_0552 + 19383475-19383559,19383807-19385129,19385211-19385299 28 4.8
04_04_1371 + 32995337-32995358,32995745-32995822,32995876-329960... 27 6.3
03_02_0827 + 11582974-11583027,11583210-11584358 27 6.3
11_01_0256 + 1969292-1969563,1970004-1970270,1970413-1970989 27 8.4
08_01_0533 + 4625376-4625709,4625799-4625966,4627428-4627689,462... 27 8.4
07_03_0779 - 21464249-21464257,21465400-21466374 27 8.4
02_02_0440 - 10273032-10273259,10273423-10273461,10273875-102741... 27 8.4
01_07_0117 + 41171919-41172395 27 8.4
>01_01_0058 +
440328-440437,440514-440733,441605-441805,441915-441985,
442058-442217,444166-444492,444529-444759,444869-445249,
445573-445648,445736-445799,446334-446469,447666-447710,
447851-447916
Length = 695
Score = 162 bits (394), Expect = 1e-40
Identities = 73/110 (66%), Positives = 90/110 (81%), Gaps = 4/110 (3%)
Frame = +2
Query: 2 NGGLLVAACINQRPDLYGAAIVQVGVLDMLRFQKFTIGYAWVSDYGSSDNKTQFEYLLKY 181
NGGLL+AAC+NQRPDL+G A+ VGV+DMLRF KFTIG+AW +DYG SDN+ +F +L+KY
Sbjct: 556 NGGLLIAACVNQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTTDYGCSDNEEEFHWLIKY 615
Query: 182 SPLHNIVSP----DVRGVQYPATLVLSADHDDRVVPLHSLKYIATLQHVL 319
SPLHN+ P V QYPA ++L+ADHDDRVVPLHSLK +ATLQ+VL
Sbjct: 616 SPLHNVRRPWEQSFVNCCQYPAIMLLTADHDDRVVPLHSLKLLATLQYVL 665
>09_04_0503 -
18170645-18170858,18171029-18171222,18171419-18171629,
18172162-18172553,18172926-18173054,18173353-18173487,
18173885-18174088,18174716-18174771,18174793-18174950,
18175864-18176231
Length = 686
Score = 66.9 bits (156), Expect = 8e-12
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Frame = +2
Query: 5 GGLLVAACINQRPDLYGAAIVQVGVLDMLRFQKFTIGYAWVSDY---GSSDNKTQFEYLL 175
GGLLV A IN PDL+ AA+++V LD+ + + DY G + T+F+ +
Sbjct: 530 GGLLVGAVINMLPDLFSAAVLKVPFLDICNTMMDSTLPLTILDYEEFGDPNISTEFDTIR 589
Query: 176 KYSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPLHSLKYIATLQHVLRHSTVQRHPVLA 355
YSP N+ SPD + YP LV ++ +D RV + K+++ ++ + S V+
Sbjct: 590 SYSPYDNL-SPD---ICYPPVLVTASFNDTRVGVWEAAKWVSKVRDITCQSC--SWSVIL 643
Query: 356 RIDTKAGHGGGKPTTKLIDEHSDILCFMTQALGL 457
+ + ++GH G DE + F+ +ALGL
Sbjct: 644 KTNMQSGHFGEGGRFMHCDETAFEYAFLMKALGL 677
>09_04_0365 -
16962608-16963174,16963301-16963486,16963824-16963896,
16964307-16964497,16964982-16965198,16965394-16965797,
16966593-16966658,16966668-16966721,16966945-16967079,
16967194-16967391,16967734-16967918,16968990-16969527
Length = 937
Score = 51.2 bits (117), Expect = 4e-07
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Frame = +2
Query: 5 GGLLVAACINQRPDLYGAAIVQVGVLDMLRFQKFTIGYAWVSDY---GSSDNKTQFEYLL 175
GGLLVA+ IN RPDL+ A +++V LD+ I DY G + +F +
Sbjct: 578 GGLLVASAINTRPDLFRAVVLKVPFLDVCNTLLHPILPLTAIDYEEFGFPVDHEEFLSIR 637
Query: 176 KYSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPLHSLKYIATLQHVLRH 325
KYSP NI + V YPA V S+ + R + K++A ++ V R+
Sbjct: 638 KYSPYDNI----QKDVPYPAVFVTSS-FNTRFGVWEAAKWVAKVREVTRY 682
>06_03_1503 - 30621089-30621170,30621258-30621438,30621462-30621510,
30621777-30621842,30621976-30622014,30622414-30622779,
30623290-30623448,30623805-30623993,30624877-30625168,
30626251-30626597,30627239-30627433,30627518-30627798,
30629525-30629690
Length = 803
Score = 37.1 bits (82), Expect = 0.008
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Frame = +2
Query: 5 GGLLVAACINQRPDLYGAAIVQVGVLDML-RFQKFTI--------GYAW-------VSDY 136
GGLL+ A +N RPDL+ AA+ V +D+L TI W + ++
Sbjct: 621 GGLLMGAVLNMRPDLFKAAVAGVPFVDVLTTMLDPTIPLTTSEWESEGWGQPRLLGMQEW 680
Query: 137 GSSDNKTQFEYLLKYSPLHNIVSPDVRGVQYPATLVLSAD--------------HDDRVV 274
G + + Y+ YSP+ N+ + + A L +S D D RV+
Sbjct: 681 GDPRKEEYYYYMKSYSPVDNLKAQGYPNILVTAGLNVSVDWLIDVSAQLTSLYEPDPRVM 740
Query: 275 PLHSLKYIATLQHVLRHSTVQRHPVLARIDTKAGHGGGKPTTKLIDEHSDILCFMTQALG 454
KY+A L+ + + +L + + AGH + + E + F+ +ALG
Sbjct: 741 YSEPAKYVAKLRELKTDDNL----LLFKCELGAGHFSKSGRFEKLREDAFTYAFILKALG 796
Query: 455 L 457
+
Sbjct: 797 M 797
>07_03_1778 +
29451902-29452166,29452665-29452849,29453504-29453693,
29453990-29454168,29454263-29454314,29454426-29454553,
29454920-29455099,29455209-29455276,29455364-29455506,
29455682-29455743,29455874-29455987,29456180-29456320,
29456680-29456832,29456973-29457026,29457102-29457212,
29457339-29457512,29457600-29457680,29457788-29457886,
29457905-29458057
Length = 843
Score = 33.5 bits (73), Expect = 0.096
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = -2
Query: 316 HVLQRRDVLERVQR-HDTVVVVCGQHQRRRVLHSSDIRTHNVVQRRILQQVLELCLVIGT 140
HV +D ER+ D H RVL + DIRT + +L+Q L L++
Sbjct: 284 HVYPNKDAKERIYPVADATTFFTDMHYILRVLAAGDIRTVCYKRLNLLEQKFNLHLMVN- 342
Query: 139 AVVRNPSVTDREFLEPEHV*HTDLYDGRAVE 47
DRE L + H D Y+ R V+
Sbjct: 343 --------ADRELLAQKAAPHRDFYNVRKVD 365
>06_01_1186 -
10195175-10195621,10195882-10195930,10196019-10196168,
10196513-10196658,10196877-10196914,10197000-10197216,
10197393-10197611,10197753-10197879,10198631-10198812,
10198928-10199131,10199773-10199782,10200789-10200815,
10201072-10201132,10201731-10201851
Length = 665
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 308 QHVLRHSTVQRHPVLARIDTKAGHGGGKPTTKLIDEHSDI 427
+HV+ HS + P + +I T + G G T ID H I
Sbjct: 255 RHVIEHSAGKLEPYIRKILTSSLDGDGTSTNNSIDHHEVI 294
>04_04_0790 +
28083116-28083337,28083446-28083652,28083739-28083809,
28083898-28084063,28084189-28084788,28084928-28085323
Length = 553
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 2 NGGLLVAACINQ 37
NGGLLVAACINQ
Sbjct: 538 NGGLLVAACINQ 549
>01_05_0473 - 22549178-22549532,22549612-22550576
Length = 439
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -3
Query: 306 SVAMYLSECSGTTRSSWSADSTSVAGYCTPRTSGLTMLCNGEYFNKYSNCVLLSELP 136
+V + L C G SW S S Y + + G LCN Y + C++ ELP
Sbjct: 327 AVELQLLACGG----SWDIVSNSRHYYLSGHSDGPLHLCNDGYKTVAAGCLVNDELP 379
>03_02_0992 + 13049871-13050449
Length = 192
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 338 RHPVLARIDTKAGHGGGKPTTKLIDE 415
RHP L R D + G GGG+ T + E
Sbjct: 165 RHPPLLRSDLEGGRGGGRTTRMRMGE 190
>01_06_0989 - 33618841-33619161
Length = 106
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 278 LHSLKYIATLQHVLRHSTVQRHPVLARIDTKAGHGGGKPTTKLIDE--HSDILCFMTQAL 451
LH + + ++ V V R + ++ AG G G+P K++ E S +C+ +A
Sbjct: 32 LHEMAAVEKMERVEVKIRVTRRQLQELLEKAAGEGKGRPVEKVLAEMISSGKVCYEQEAA 91
Query: 452 G 454
G
Sbjct: 92 G 92
>07_03_0784 + 21505204-21505950
Length = 248
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 170 LLKYSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPL 280
L+KY P + G+ YP L LSAD VV L
Sbjct: 103 LMKYDPTTGYLDVLQSGMTYPNGLALSADRSHLVVAL 139
>07_03_0781 - 21477797-21478549
Length = 250
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 170 LLKYSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPL 280
L+KY P + G+ YP L LSAD VV L
Sbjct: 103 LMKYDPTTGYLDVLQSGMTYPNGLALSADRSHLVVAL 139
>07_03_0552 + 19383475-19383559,19383807-19385129,19385211-19385299
Length = 498
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 154 LVIGTAVVRNPSVTDR-EFLEPEHV*HTDLYDGRAVEVRALVDAG 23
+ IGTAV S +D EFL + + H LYD + AL +G
Sbjct: 47 VTIGTAVTNLLSPSDLPEFLRAQRITHVRLYDADPRMLSALASSG 91
>04_04_1371 +
32995337-32995358,32995745-32995822,32995876-32996019,
32997595-32997930,32998014-32998166,32998286-32998501,
32998600-33000695
Length = 1014
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = -3
Query: 441 VIKQRMSECSSISLVVGFXXXXPAFVSI---RASTGCRCTVECRSTCCSVAMYLSECSGT 271
VI + ++EC+ L+ G + + ST C VE R+ + L+ +GT
Sbjct: 53 VIVKLLAECTKTKLLPGAVTDATCELRLDYSNISTSHGCFVEERTALMDIGSSLTRSNGT 112
Query: 270 TRSSW 256
SW
Sbjct: 113 VPPSW 117
>03_02_0827 + 11582974-11583027,11583210-11584358
Length = 400
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 266 RVVPLHSLKYIATLQHVLRHSTVQRHPVLARIDTKAGHGGG 388
RVV S A +H L V+ HP L R+ HG G
Sbjct: 255 RVVWTISSLIAAATRHYLLREIVKEHPTLERVALTDAHGQG 295
>11_01_0256 + 1969292-1969563,1970004-1970270,1970413-1970989
Length = 371
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 170 LLKYSPLHNIVSPDVRGVQYPATLVLSAD 256
LLKY P N V V G+++P L +S D
Sbjct: 195 LLKYDPKENKVEVLVDGLRFPNGLAMSID 223
>08_01_0533 +
4625376-4625709,4625799-4625966,4627428-4627689,
4627787-4627934,4628453-4628496,4628812-4628859,
4629245-4630509,4630741-4630839,4630916-4631097,
4631186-4631246,4631488-4631725,4631818-4631971,
4632042-4632335
Length = 1098
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3
Query: 369 FVSIRASTGCRCTVECRSTCCSVAMYLSECS 277
F+ I + C VECRS C VA S S
Sbjct: 689 FIYIHKRSFDECMVECRSNCSCVAYAYSNIS 719
>07_03_0779 - 21464249-21464257,21465400-21466374
Length = 327
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 170 LLKYSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPL 280
L+KY P + G+ YP L +SAD VV L
Sbjct: 205 LMKYDPTTGYLDVLQSGMTYPNGLAISADRSHLVVAL 241
>02_02_0440 -
10273032-10273259,10273423-10273461,10273875-10274123,
10274203-10274329,10275009-10275251,10275359-10275457,
10275566-10275681,10275813-10276039,10276164-10276276,
10276402-10276522,10276641-10276855,10277042-10277225,
10277739-10278048,10278155-10278249,10278473-10278485
Length = 792
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -2
Query: 250 GQHQRRRVLHSSDIRTHNVVQRRILQQVLELC 155
G++ + RV+H HN ++ Q++E+C
Sbjct: 635 GRYDKGRVMHPGSCTVHNKETCLLIAQIVEIC 666
>01_07_0117 + 41171919-41172395
Length = 158
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 287 LKYIATLQHVLRHSTVQRHPVLARIDTKAGHGGGK 391
L +A LR S + P R+ T GHGGG+
Sbjct: 19 LVVLAAPAAALRTSAISAAPEYPRLPTGPGHGGGR 53
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,217,454
Number of Sequences: 37544
Number of extensions: 262617
Number of successful extensions: 923
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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