Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_G21
(497 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12889| Best HMM Match : Peptidase_S9 (HMM E-Value=1.4e-38) 74 3e-19
SB_41344| Best HMM Match : Peptidase_S9 (HMM E-Value=5.6e-12) 48 3e-06
SB_2045| Best HMM Match : EGF (HMM E-Value=0) 34 0.075
SB_12223| Best HMM Match : ShTK (HMM E-Value=1.8e-09) 33 0.099
SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2) 30 0.92
SB_14215| Best HMM Match : ZF-HD_dimer (HMM E-Value=1.5) 29 1.6
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_57397| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_9028| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_53352| Best HMM Match : Collagen (HMM E-Value=0.11) 29 2.8
SB_39241| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_32678| Best HMM Match : HEAT (HMM E-Value=9.6e-18) 28 3.7
SB_19556| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_33565| Best HMM Match : SET (HMM E-Value=3.99931e-42) 28 4.9
SB_23357| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_14123| Best HMM Match : TSP_1 (HMM E-Value=1.2e-05) 28 4.9
SB_56178| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_11794| Best HMM Match : TNFR_c6 (HMM E-Value=1.4e-05) 27 6.5
SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06) 27 8.6
>SB_12889| Best HMM Match : Peptidase_S9 (HMM E-Value=1.4e-38)
Length = 253
Score = 73.7 bits (173), Expect(2) = 3e-19
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = +2
Query: 179 YSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPLHSLKYIATLQHVL 319
YSPLHNI PD G QYP ++L+ADHDDRVVPLHS K+IA LQHV+
Sbjct: 160 YSPLHNIKVPD-NGAQYPPLMLLTADHDDRVVPLHSFKFIAELQHVM 205
Score = 38.7 bits (86), Expect(2) = 3e-19
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +2
Query: 2 NGGLLVAACINQRPDLYGAAIVQV 73
NGGLLV AC NQ P+L+G I QV
Sbjct: 135 NGGLLVCACANQAPELFGCIIAQV 158
>SB_41344| Best HMM Match : Peptidase_S9 (HMM E-Value=5.6e-12)
Length = 196
Score = 48.4 bits (110), Expect = 3e-06
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Frame = +2
Query: 5 GGLLVAACINQRPDLYGAAIVQVG---VLDMLRFQKFTIGYAWVSDYGS-SDNKTQFEYL 172
GGL+V A N+ P+L+ A +++V VL + + ++G ++ +Y+
Sbjct: 35 GGLVVGAVCNRSPELFKAVVMKVPFLCVLTSMLDPTLPLTSQEYDEWGDPRSSELDLKYI 94
Query: 173 LKYSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPLHSLKYIATLQHVLRHSTVQRHPVL 352
Y P HNI S +YP LV + DDRV LKY+A L+ Q
Sbjct: 95 KSYCPYHNISSEK----RYPDMLVSGSIFDDRVPYWVPLKYVAKLRLQAHDQRTQNAGSQ 150
Query: 353 ARIDTKAG 376
DT AG
Sbjct: 151 TGADTTAG 158
>SB_2045| Best HMM Match : EGF (HMM E-Value=0)
Length = 1101
Score = 33.9 bits (74), Expect = 0.075
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = -3
Query: 363 SIRASTGCRCTVECRSTCCSVAMYLSECSGTTRSSWSADSTSVAGYCTPRTSGLTMLCNG 184
S++ ++G C C L ++ SSW + ++G CT + T LCN
Sbjct: 919 SVKCTSGSTCLDRLDGYECQCPPGLKGIYCSSNSSWCEPNPCISGNCTDTGTNFTCLCNP 978
Query: 183 EYFNKY 166
+ +Y
Sbjct: 979 GFTGRY 984
>SB_12223| Best HMM Match : ShTK (HMM E-Value=1.8e-09)
Length = 542
Score = 33.5 bits (73), Expect = 0.099
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 164 EYLLKYSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPLHSL 289
+Y ++ LHN+ +PD R P +++ D+ R+V LH+L
Sbjct: 26 DYAIRLVCLHNLHNPDTRHPSVPGNTLVNCDYAIRLVCLHNL 67
Score = 33.5 bits (73), Expect = 0.099
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 164 EYLLKYSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPLHSL 289
+Y ++ LHN+ +PD R P +++ D+ R+V LH+L
Sbjct: 56 DYAIRLVCLHNLHNPDTRHPSIPGNTLVNCDYAIRLVCLHNL 97
Score = 33.5 bits (73), Expect = 0.099
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 164 EYLLKYSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPLHSL 289
+Y ++ LHN+ +PD R P +++ D+ R+V LH+L
Sbjct: 176 DYAIRLVCLHNLHNPDTRHPSIPGNTLVNCDYAIRLVCLHNL 217
Score = 33.5 bits (73), Expect = 0.099
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 164 EYLLKYSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPLHSL 289
+Y ++ LHN+ +PD R P +++ D+ R+V LH+L
Sbjct: 206 DYAIRLVCLHNLHNPDTRHPSVPGNTLVNCDYAIRLVCLHNL 247
Score = 31.5 bits (68), Expect = 0.40
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 164 EYLLKYSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPLHSL 289
+Y ++ LHN+ +PD P +++ D+ R+V LH+L
Sbjct: 146 DYAIRLVCLHNLHNPDTHHPSVPGNTLVNCDYAIRLVCLHNL 187
Score = 31.5 bits (68), Expect = 0.40
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 164 EYLLKYSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPLHSL 289
+Y ++ LHN+ +PD P +++ D+ R+V LH+L
Sbjct: 296 DYAIRLVCLHNLHNPDTHHPSVPGNTLVNCDYAIRLVCLHNL 337
Score = 30.7 bits (66), Expect = 0.70
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 164 EYLLKYSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPLHSL 289
+Y ++ LHN+ +PD R P +++ D+ R+V L++L
Sbjct: 86 DYAIRLVCLHNLHNPDTRHPSIPGNTLVNCDYAIRLVCLNNL 127
Score = 30.7 bits (66), Expect = 0.70
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 164 EYLLKYSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPLHSL 289
+Y ++ L+N+ +PD R P +++ D+ R+V LH+L
Sbjct: 116 DYAIRLVCLNNLHNPDTRHPSVPGNTLVNCDYAIRLVCLHNL 157
Score = 30.7 bits (66), Expect = 0.70
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 164 EYLLKYSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPLHSL 289
+Y ++ LHN+ +PD R P +++ D+ R+V L++L
Sbjct: 236 DYAIRLVCLHNLHNPDTRHPSIPGNTLVNCDYAIRLVCLNNL 277
Score = 30.7 bits (66), Expect = 0.70
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 164 EYLLKYSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPLHSL 289
+Y ++ L+N+ +PD R P +++ D+ R+V LH+L
Sbjct: 266 DYAIRLVCLNNLHNPDTRHPSVPGNTLVNCDYAIRLVCLHNL 307
Score = 30.7 bits (66), Expect = 0.70
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 164 EYLLKYSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPLHSL 289
+Y ++ LHN+ +PD R P +++ D+ R+V L++L
Sbjct: 326 DYAIRLVCLHNLHNPDTRHPSIPGNTLVNCDYAIRLVCLNNL 367
>SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2)
Length = 782
Score = 30.3 bits (65), Expect = 0.92
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +2
Query: 179 YSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPLHSLKYIATLQHV-LRHSTVQ----RH 343
Y +H I D +YP+ L L +D + YI H +++S +
Sbjct: 565 YRNVHVIRGYDTAADEYPSHLNLFSDEGGTYNSGKQVGYIRNDDHGGVQYSWFAPPKGKR 624
Query: 344 PVLARIDTKAGHGGGKPTTKLIDE 415
P L R +AGHGG TKL+++
Sbjct: 625 PFLYRGGRRAGHGGAAEFTKLLED 648
>SB_14215| Best HMM Match : ZF-HD_dimer (HMM E-Value=1.5)
Length = 738
Score = 29.5 bits (63), Expect = 1.6
Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Frame = +2
Query: 152 KTQFEYLLK----YSPLHNIVSPDVRGVQYPATLVLSADHDDRVVPLHSLKYIATLQHVL 319
+T F YL K Y P H + P V +T +L LHS K A L
Sbjct: 23 QTAFRYLGKTQKPYQPTHPVAPPTPFAVALTSTGILKWKRKKTRYCLHSTKPQANSDPSL 82
Query: 320 RHSTVQRHPVLARIDTKAGHG 382
R TV H L + A HG
Sbjct: 83 RILTVM-HQALLQARKNASHG 102
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Frame = -3
Query: 354 ASTGCRCTVECRSTCCSVAMYLSECSGTTRSSWSADSTS--VAGYCTPRTSGLTMLCNGE 181
AS G CT S CS + + T SA+++ + CT T CN
Sbjct: 815 ASVGSTCTNSVGSYSCSCNILYTGDGHTCTDLCSAENSCAPIGSSCTLTNDSYTCACNSG 874
Query: 180 YFNKYSNCVLLS 145
+ NC +++
Sbjct: 875 FLGDGYNCTVVT 886
>SB_57397| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = -2
Query: 397 SRLPAAVTRFRVDTREYWVSLYCRVSQHVLQRRDVLERVQRHDTVVVVCGQHQRRRVLHS 218
SR A R+DTR++ V+L C+ ++V + ++ + R + + T + V H
Sbjct: 22 SRFIFAARNGRIDTRQFCVTLTCK--EYVTRDKEYVTRDKEYVTHDKEYVTRDKEYVTHD 79
Query: 217 SDIRTHNVV 191
+ TH+ V
Sbjct: 80 KEYVTHDKV 88
>SB_9028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = -2
Query: 229 VLHSSDIRTHN--VVQRRILQQVLELCLVIGTAVV 131
VLHS++IR N + I++Q + LC+ + TA+V
Sbjct: 83 VLHSTNIRQDNDDLGNLAIIRQAIYLCVTLATAIV 117
>SB_53352| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 348
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 299 ATLQHVLRHSTVQRHPVLARIDTKAGHGGGK 391
A ++ +LR Q H +L AGHGGG+
Sbjct: 196 AVIKRLLRSDDEQNHQLLKLAHPSAGHGGGE 226
>SB_39241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = -1
Query: 206 DSQCCATANT-STSTRIVSC 150
DSQCC T T ST++R+ SC
Sbjct: 79 DSQCCTTRRTLSTASRVRSC 98
>SB_32678| Best HMM Match : HEAT (HMM E-Value=9.6e-18)
Length = 844
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = -3
Query: 345 GCRCTVECRSTCCSVAMYLSECSGTTRSSWSADSTSVAGYCTPRTSGLTMLCNGEYFNKY 166
G C + + C C + +S S++ +V+G+C+ T+ L + YFN +
Sbjct: 394 GSNCQSTDKGSNCQSTEKSDSCQSSEKSR-SSNGCTVSGFCSVPTTDLDADLDENYFNSF 452
>SB_19556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 25 LHQPAPGPLRRGHRTSRCVRHAPVP 99
LH+P P P++ + R RH+P P
Sbjct: 136 LHRPPPSPVQEAKASPRPPRHSPYP 160
>SB_33565| Best HMM Match : SET (HMM E-Value=3.99931e-42)
Length = 601
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Frame = -2
Query: 283 VQRHDTVVVVCGQHQRRRV---LHSSDIRTHN--VVQRRILQQVLELCLVIGTAVV 131
++R T +V+ + R+ + LHS++IR N + I++Q + LC+ + TA+V
Sbjct: 474 IRRTPTTIVLHLANIRQAIEHRLHSTNIRQDNDDLGNLAIIRQAIYLCVTLATAIV 529
>SB_23357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 326 STVQRHPVLARIDTKAGHGGGKPTTKLIDEHSDILCFMTQALGLQFIK 469
S V P + + G G GKP+ L D S LC + L +F++
Sbjct: 44 SNVSHTPRIPFVSYHRGLGSGKPSPDLHDTRSGHLCTPLKELRKKFVR 91
>SB_14123| Best HMM Match : TSP_1 (HMM E-Value=1.2e-05)
Length = 168
Score = 27.9 bits (59), Expect = 4.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 342 CRCTVECRSTCCSVAMYL 289
CRC V R TCC + M++
Sbjct: 103 CRCRVGYRGTCCELGMHV 120
>SB_56178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -3
Query: 345 GCRCTVECRSTCCSVAMYLSECSGTTRSSWSADS 244
GCRC +C + C + + EC + AD+
Sbjct: 415 GCRCKAQCNTKQCPCFLAVRECDPDLCGTCGADN 448
>SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 212 HQDSQCCATANTSTSTRIVSCYRNC 138
H+ S CC A S R +C RNC
Sbjct: 311 HEYSNCCERACQSDIVRHANCSRNC 335
>SB_11794| Best HMM Match : TNFR_c6 (HMM E-Value=1.4e-05)
Length = 331
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 374 GHGGGKPTTKLIDEHSDILCFMTQALGLQ 460
GH G TTK HS+I+C T +G Q
Sbjct: 172 GHCDGFVTTKNCTTHSNIVCSTTCKMGFQ 200
>SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06)
Length = 385
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 280 QRHDTVVVVCGQHQRRRVLHSSDIRTHNVVQRRILQQVLEL 158
Q+HD V +H+RR+ + ++R + RR L LEL
Sbjct: 49 QQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRSLPYKLEL 89
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,090,797
Number of Sequences: 59808
Number of extensions: 311295
Number of successful extensions: 1040
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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