Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_G21
(497 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 35 0.038
AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical... 30 1.1
AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical... 30 1.1
AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin bet... 30 1.1
AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin bet... 30 1.1
Z81527-4|CAB04274.2| 388|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z68115-3|CAA92168.1| 243|Caenorhabditis elegans Hypothetical pr... 27 7.6
U29381-5|AAA68753.2| 229|Caenorhabditis elegans Hypothetical pr... 27 7.6
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 34.7 bits (76), Expect = 0.038
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = -3
Query: 336 CTVECRSTCCS---VAMYLSECSGTTRSSWSADSTSVAGYCTPRTSGLTMLCNGEYFNKY 166
C CRSTC S +++ + C T RS+ S T V CT TSG + C+ Y
Sbjct: 230 CNSGCRSTCSSTSTLSVCIPACQQTCRSTCSTAKTFVIP-CTSGTSGNSCSCSTGYSICG 288
Query: 165 SNC 157
S C
Sbjct: 289 SQC 291
>AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical
protein Y17G7B.15b protein.
Length = 742
Score = 29.9 bits (64), Expect = 1.1
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 6/110 (5%)
Frame = -3
Query: 414 SSISLVVGFXXXXPAFVSIRASTGCRCTVECRSTCCS-VAMYLS-----ECSGTTRSSWS 253
SSIS GF AF +R G +C S V++ L ECSG R S
Sbjct: 351 SSISTAAGFSSSTTAFEQVRRVPGNEVCADCGSPAPKWVSINLGVVLCIECSGAHR-SLG 409
Query: 252 ADSTSVAGYCTPRTSGLTMLCNGEYFNKYSNCVLLSELP*SETQA*PIVN 103
++ V C N+ N + L+ LP +++ P +N
Sbjct: 410 VQTSKVRSLCMDSIDNELRDVLLALGNRQVNEIFLAHLPPADSIVPPQIN 459
>AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical
protein Y17G7B.15a protein.
Length = 826
Score = 29.9 bits (64), Expect = 1.1
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 6/110 (5%)
Frame = -3
Query: 414 SSISLVVGFXXXXPAFVSIRASTGCRCTVECRSTCCS-VAMYLS-----ECSGTTRSSWS 253
SSIS GF AF +R G +C S V++ L ECSG R S
Sbjct: 435 SSISTAAGFSSSTTAFEQVRRVPGNEVCADCGSPAPKWVSINLGVVLCIECSGAHR-SLG 493
Query: 252 ADSTSVAGYCTPRTSGLTMLCNGEYFNKYSNCVLLSELP*SETQA*PIVN 103
++ V C N+ N + L+ LP +++ P +N
Sbjct: 494 VQTSKVRSLCMDSIDNELRDVLLALGNRQVNEIFLAHLPPADSIVPPQIN 543
>AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin beta
1B protein.
Length = 742
Score = 29.9 bits (64), Expect = 1.1
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 6/110 (5%)
Frame = -3
Query: 414 SSISLVVGFXXXXPAFVSIRASTGCRCTVECRSTCCS-VAMYLS-----ECSGTTRSSWS 253
SSIS GF AF +R G +C S V++ L ECSG R S
Sbjct: 351 SSISTAAGFSSSTTAFEQVRRVPGNEVCADCGSPAPKWVSINLGVVLCIECSGAHR-SLG 409
Query: 252 ADSTSVAGYCTPRTSGLTMLCNGEYFNKYSNCVLLSELP*SETQA*PIVN 103
++ V C N+ N + L+ LP +++ P +N
Sbjct: 410 VQTSKVRSLCMDSIDNELRDVLLALGNRQVNEIFLAHLPPADSIVPPQIN 459
>AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin beta
1A protein.
Length = 826
Score = 29.9 bits (64), Expect = 1.1
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 6/110 (5%)
Frame = -3
Query: 414 SSISLVVGFXXXXPAFVSIRASTGCRCTVECRSTCCS-VAMYLS-----ECSGTTRSSWS 253
SSIS GF AF +R G +C S V++ L ECSG R S
Sbjct: 435 SSISTAAGFSSSTTAFEQVRRVPGNEVCADCGSPAPKWVSINLGVVLCIECSGAHR-SLG 493
Query: 252 ADSTSVAGYCTPRTSGLTMLCNGEYFNKYSNCVLLSELP*SETQA*PIVN 103
++ V C N+ N + L+ LP +++ P +N
Sbjct: 494 VQTSKVRSLCMDSIDNELRDVLLALGNRQVNEIFLAHLPPADSIVPPQIN 543
>Z81527-4|CAB04274.2| 388|Caenorhabditis elegans Hypothetical
protein F35E12.4 protein.
Length = 388
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -3
Query: 333 TVECRSTCC--SVAMYLSECSGTTRSSWSADSTSVAGYCTPRTSGLTMLCNGEYF 175
T +S C S+ + GTT +S SA S+ GY T G + L + F
Sbjct: 325 TFHVQSACIHFSIKPNYQQVVGTTSASQSASSSMTTGYAEATTRGASFLFSASSF 379
>Z68115-3|CAA92168.1| 243|Caenorhabditis elegans Hypothetical
protein F19H6.4 protein.
Length = 243
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/63 (23%), Positives = 25/63 (39%)
Frame = -3
Query: 339 RCTVECRSTCCSVAMYLSECSGTTRSSWSADSTSVAGYCTPRTSGLTMLCNGEYFNKYSN 160
R T + + A + +G + W+A + T + G M C G Y N S+
Sbjct: 94 RSTTKSPVAIVAAATFFCAYNGFLQGYWNAFYQPEEPWTTRKLVGSLMYCTGMYINHKSD 153
Query: 159 CVL 151
+L
Sbjct: 154 TIL 156
>U29381-5|AAA68753.2| 229|Caenorhabditis elegans Hypothetical
protein F35D11.7 protein.
Length = 229
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 361 DTREYWVSLYCRVSQHVLQRRDVLERVQRHDTVVVVCGQH 242
+TR+ W SL V ++ +Q E+ +D V+CG+H
Sbjct: 188 ETRKNWGSLEFCVGKNAVQAYTDDEKPYGNDVEAVLCGRH 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,687,965
Number of Sequences: 27780
Number of extensions: 211544
Number of successful extensions: 707
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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