Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_G17
         (481 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    24   0.63 
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    22   3.4  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            22   3.4  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   3.4  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   4.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.8  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   7.8  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 24.2 bits (50), Expect = 0.63
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -1

Query: 352 TRLWMRIWNLSQVLEPSPQGVLRVVMRRTLV 260
           TRLW R   L +VL   P    R   +R LV
Sbjct: 533 TRLWPRAAALGEVLWSEPTNTWREAEQRILV 563


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 357 RSHACGCASGICPKSWN 307
           R+H   C   ICPK+++
Sbjct: 2   RTHTLPCKCTICPKAFS 18


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 231 LRVKGPVRMPT 263
           +RVK P+RMPT
Sbjct: 1   MRVKHPLRMPT 11


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 231 LRVKGPVRMPT 263
           +RVK P+RMPT
Sbjct: 1   MRVKHPLRMPT 11


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 5/20 (25%), Positives = 15/20 (75%)
 Frame = +3

Query: 102 KDIEKPQAEISPIHRIRITL 161
           +++EK + ++S +H+  +T+
Sbjct: 92  REVEKAKRDLSSVHKTTLTI 111


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 134 TDPSYQDHADVTQCTL 181
           TDP+     D TQC L
Sbjct: 154 TDPNRAPDCDPTQCVL 169


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 454 CAYASAMVTSTSTPGSILIEVICFTIS 374
           C  ASA++ ST    +   +++CF  S
Sbjct: 6   CLLASALLISTHQTEAKTDKILCFFAS 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,171
Number of Sequences: 336
Number of extensions: 2554
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)