Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_G16
         (252 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   2.0  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   2.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    19   6.2  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    19   6.2  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    19   8.1  

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 106 PQSQLKVGRSPPRGAP 153
           PQ Q +V R PP  +P
Sbjct: 108 PQIQTQVARPPPARSP 123


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 106 PQSQLKVGRSPPRGAP 153
           PQ Q +V R PP  +P
Sbjct: 108 PQIQTQVARPPPARSP 123


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 163 ISEVESSAHGPYA*SMTASRSGSRAP 240
           IS V+  +H  Y       R+G RAP
Sbjct: 136 ISVVQKVSHTLYHLQDIIDRNGGRAP 161


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +2

Query: 149 HLKPEFLKLN 178
           +L+PEFLKL+
Sbjct: 112 NLEPEFLKLD 121


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 19.0 bits (37), Expect = 8.1
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 53  VPGSAPCR 76
           + GSAPCR
Sbjct: 91  IAGSAPCR 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,506
Number of Sequences: 336
Number of extensions: 945
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  3844548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)