Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_G16
         (252 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104911-1|AAI04912.1|  620|Homo sapiens GLIS family zinc finger...    28   4.7  
BC101799-1|AAI01800.1|  620|Homo sapiens GLIS family zinc finger...    28   4.7  
AL591720-1|CAH72026.1|  620|Homo sapiens GLIS family zinc finger...    28   4.7  
AK093474-1|BAC04178.1|  368|Homo sapiens protein ( Homo sapiens ...    28   4.7  
AK090634-1|BAC03494.1|  620|Homo sapiens protein ( Homo sapiens ...    28   4.7  

>BC104911-1|AAI04912.1|  620|Homo sapiens GLIS family zinc finger 1
           protein.
          Length = 620

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +2

Query: 173 LNPQHTVPTPSR*RPLDLGVARHHHL 250
           L P H VP  SR  PLD   + HHHL
Sbjct: 418 LPPAHDVP--SRHHPLDATTSSHHHL 441


>BC101799-1|AAI01800.1|  620|Homo sapiens GLIS family zinc finger 1
           protein.
          Length = 620

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +2

Query: 173 LNPQHTVPTPSR*RPLDLGVARHHHL 250
           L P H VP  SR  PLD   + HHHL
Sbjct: 418 LPPAHDVP--SRHHPLDATTSSHHHL 441


>AL591720-1|CAH72026.1|  620|Homo sapiens GLIS family zinc finger 1
           protein.
          Length = 620

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +2

Query: 173 LNPQHTVPTPSR*RPLDLGVARHHHL 250
           L P H VP  SR  PLD   + HHHL
Sbjct: 418 LPPAHDVP--SRHHPLDATTSSHHHL 441


>AK093474-1|BAC04178.1|  368|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36155 fis, clone TESTI2025499, moderately
           similar to ZINC FINGER PROTEIN GLI3. ).
          Length = 368

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +2

Query: 173 LNPQHTVPTPSR*RPLDLGVARHHHL 250
           L P H VP  SR  PLD   + HHHL
Sbjct: 166 LPPAHDVP--SRHHPLDATTSSHHHL 189


>AK090634-1|BAC03494.1|  620|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33315 fis, clone BNGH42007037, moderately
           similar to ZINC FINGER PROTEIN GLI1 (GLI). ).
          Length = 620

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +2

Query: 173 LNPQHTVPTPSR*RPLDLGVARHHHL 250
           L P H VP  SR  PLD   + HHHL
Sbjct: 418 LPPAHDVP--SRHHPLDATTSSHHHL 441


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,994,026
Number of Sequences: 237096
Number of extensions: 595919
Number of successful extensions: 1030
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 76,859,062
effective HSP length: 61
effective length of database: 62,396,206
effective search space used: 1372716532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)