Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_G15
         (217 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   0.41 
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   0.41 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   1.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              19   5.1  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    19   5.1  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      19   5.1  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    19   6.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    19   8.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   8.8  

>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 0.41
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 150 LNISSVPWDHVEARARRCSGGVSAGKRHHRCN 55
           ++I+   +D +    R CSG +S  K    CN
Sbjct: 43  VHITKDEYDEIGRLKRTCSGDISVTKCEGFCN 74


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 0.41
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 150 LNISSVPWDHVEARARRCSGGVSAGKRHHRCN 55
           ++I+   +D +    R CSG +S  K    CN
Sbjct: 43  VHITKDEYDEIGRLKRTCSGDISVTKCEGFCN 74


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 183 SCSDGVRRWYCLNI 142
           SCSD + RW  L +
Sbjct: 434 SCSDKIARWNVLGV 447


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = +1

Query: 88   PTGAPPSACFDMIPGHAADVQTVPAP 165
            P+G P S   D +  H   V   P P
Sbjct: 976  PSGPPTSIRVDDLDQHTLKVTWKPPP 1001


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 144 CSDSTSALHHHYS 182
           C D TSA+H   S
Sbjct: 15  CQDVTSAIHQRKS 27


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 10/39 (25%), Positives = 16/39 (41%)
 Frame = -2

Query: 117 EARARRCSGGVSAGKRHHRCNCYYVSEHHLFYKFQGGRL 1
           +A  R     V A +     +C Y++   L Y F   R+
Sbjct: 320 DASERNPRSAVLAAREITSSSCSYMAHEKLSYAFSVWRM 358


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 157 PAPYTITTAVSSVKAGHSID 216
           P    +    +S+KAG++ID
Sbjct: 249 PTDKRMFVLAASIKAGYTID 268


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +1

Query: 157 PAPYTITTAVSSVKAG 204
           P P T     SSV AG
Sbjct: 590 PXPNTCKVIASSVSAG 605


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -2

Query: 69  HHRCNCYYVSEHHLFYKFQ 13
           HH      V +HH  Y+ Q
Sbjct: 148 HHHLQSTAVQDHHRPYQQQ 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.129    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,317
Number of Sequences: 438
Number of extensions: 911
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3154875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)