Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_G14
(652 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 58 7e-09
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 56 2e-08
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 48 4e-06
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 48 7e-06
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 42 3e-04
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 39 0.003
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 38 0.006
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 37 0.010
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 32 0.29
At2g22650.1 68415.m02684 FAD-dependent oxidoreductase family pro... 30 1.5
At1g67790.1 68414.m07736 expressed protein 29 2.7
At5g42390.1 68418.m05161 metalloendopeptidase identical to chlor... 29 3.5
At4g05170.1 68417.m00777 basic helix-loop-helix (bHLH) family pr... 29 3.5
At4g18010.2 68417.m02680 inositol polyphosphate 5-phosphatase II... 28 4.7
At3g26920.1 68416.m03368 F-box family protein contains F-box dom... 28 4.7
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 28 4.7
At1g13540.1 68414.m01587 expressed protein 28 6.2
At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containi... 27 8.2
At3g27220.1 68416.m03403 kelch repeat-containing protein contain... 27 8.2
At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR... 27 8.2
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 57.6 bits (133), Expect = 7e-09
Identities = 46/194 (23%), Positives = 90/194 (46%), Gaps = 1/194 (0%)
Frame = +2
Query: 8 THLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITN-LKRQFPQLRVFLTVGGDDDTE 184
THL A ++A++Y++ N A + A T ++++ P ++ L++GG + +
Sbjct: 29 THLFCTFADLEAESYEITIATWN------QAPFHAFTETVQQRNPHVKTLLSIGGGNADK 82
Query: 185 DPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWHSIK 364
D + + +P +R +F S + +A YGF G+DL W+ P+ + + F ++
Sbjct: 83 DA--FASMASNPDSRASFIQSTITVARSYGFHGLDLDWEYPRNE-----EEMYDFGKLLE 135
Query: 365 KTFGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINL 544
+ + S G TAL+ + A+ N Q + + V +I N
Sbjct: 136 EWRSAVEAESNSS----GTTALI--LTAAVYYSSNYQ-----------GVPYPVLAISNS 178
Query: 545 VDIVNIQAFDYYTP 586
+D +N+ A+D+Y P
Sbjct: 179 LDWINLMAYDFYGP 192
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 56.4 bits (130), Expect = 2e-08
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 1/177 (0%)
Frame = +2
Query: 122 LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 301
++R+ P ++ L++GG D Y + +P +R +F +S++ +A YGF G+DL W+
Sbjct: 83 VQRRNPSVKTLLSIGGG--IADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWE 140
Query: 302 LPKRKPKKIRSSIGSFWHSIKKTFGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLV 481
P + FGT RE +A+V E + KP + L
Sbjct: 141 YPSSATE-------------MTNFGTL--------LREWRSAVVAEASS--SGKPRLLLA 177
Query: 482 ISVLPNVN-SSIYFDVPSIINLVDIVNIQAFDYYTPERNPXEADYTAPIYAPQNRDP 649
+V + N S+ + V ++ + +D VN+ A+D+Y P + A ++ P N P
Sbjct: 178 AAVFYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGPGWSRVTGP-PAALFDPSNAGP 233
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 48.4 bits (110), Expect = 4e-06
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 2/216 (0%)
Frame = +2
Query: 8 THLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITN-LKRQFPQLRVFLTVGGDDDTE 184
THL A I TY+++ + N + T ++R+ P ++ L++GGD
Sbjct: 48 THLFCAFADINTLTYQVIVSSRN------KPKFSTFTQTVRRRNPTVKTLLSIGGDFTYN 101
Query: 185 DPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWHSIK 364
+ + +P +R F +S++ LA GF G+DL+W+ P SI
Sbjct: 102 FA--FASMASNPTSRKLFISSSIKLARSCGFHGLDLNWKYP---------SI-------- 142
Query: 365 KTFGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVN-SSIYFDVPSIIN 541
TT +D+ RE A+ E + + KP + L +V + + S+ V ++ +
Sbjct: 143 ----TTEMDNFGKLLREWRLAVEAEARS--SGKPRLLLTAAVFYSYSYYSVLHPVNAVAD 196
Query: 542 LVDIVNIQAFDYYTPERNPXEADYTAPIYAPQNRDP 649
+D VN+ A+D+Y + AP+Y P P
Sbjct: 197 SLDWVNLVAYDFYESGSSRVTCS-PAPLYDPITTGP 231
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 47.6 bits (108), Expect = 7e-06
Identities = 29/101 (28%), Positives = 52/101 (51%)
Frame = +2
Query: 8 THLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTED 187
THL A + T +V + ++ +N+ I +K++ P ++ L++GG + D
Sbjct: 39 THLFCAFADLDPQTNSVVVSGAH---EQEFSNFTKI--VKKKNPHVQTLLSIGGRN--AD 91
Query: 188 PQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPK 310
+ + +P +R +F SA+ A Y FDG+DL W+ PK
Sbjct: 92 KSAFASMASNPTSRKSFIWSAISSARYYRFDGLDLVWKYPK 132
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = +2
Query: 8 THLLYKSAGIQADTYKMVSLNENLDIDRAHAN-YRAITN-LKRQFPQLRVFLTVGGDDDT 181
THL A + A+++K+ + +AH + T +K + PQ++ L++GG +
Sbjct: 41 THLFCAFADLDANSHKVF-------VSQAHEFIFSTFTETVKIRNPQVKTLLSIGGKNAN 93
Query: 182 EDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 307
+ + + Q+R F +S + +A GF G+DL+W+ P
Sbjct: 94 NSA--FASMASNHQSRKTFIDSWIFIARSNGFHGLDLAWEYP 133
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 38.7 bits (86), Expect = 0.003
Identities = 39/173 (22%), Positives = 69/173 (39%)
Frame = +2
Query: 122 LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 301
+K + ++ L++GG D D + + + R AF +S++ +A + F G+DL+W+
Sbjct: 79 VKEKNTDVQTLLSIGGKD--ADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLDLAWE 136
Query: 302 LPKRKPKKIRSSIGSFWHSIKKTFGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLV 481
P + FG + E + A V E N P +
Sbjct: 137 YPSNDVE-------------MTNFG---------KLLEEWRAAVVEESDKTNQLPLLLTA 174
Query: 482 ISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPXEADYTAPIYAPQN 640
+ + V +I + +D VNI A+D+Y P +P A + P N
Sbjct: 175 AVYYSPQYDGVEYPVKAIADNLDFVNIMAYDFYGPGWSPVTGPPAALFHDPSN 227
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 37.9 bits (84), Expect = 0.006
Identities = 33/127 (25%), Positives = 53/127 (41%)
Frame = +2
Query: 206 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWHSIKKTFGTTP 385
+ S R +F S + +A YGFDG+DL W+ P+ + + F +K+
Sbjct: 1 MASSSYGRKSFILSTISIARSYGFDGLDLDWEYPRNA-----AEMSDFAELLKEWRYAVQ 55
Query: 386 VDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQ 565
+ SE L+ + + N N +Y V I L+D VNI+
Sbjct: 56 GEAYSSE----LPVLI------------LTATVYYSSNYNGVVY-PVKFISELLDWVNIK 98
Query: 566 AFDYYTP 586
A+D+Y P
Sbjct: 99 AYDFYGP 105
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 37.1 bits (82), Expect = 0.010
Identities = 39/173 (22%), Positives = 74/173 (42%)
Frame = +2
Query: 122 LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 301
+K + ++ L++GG D D + + + R AF +S++ +A + F G+DL+W+
Sbjct: 71 VKDKNTDVQTLLSIGGKD--ADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLDLAWE 128
Query: 302 LPKRKPKKIRSSIGSFWHSIKKTFGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLV 481
P + + +F +K E A+V E + + +
Sbjct: 129 YPSNDVE-----MANFGKLVK----------------EWRAAVVEESDRTNQLPLLLTAA 167
Query: 482 ISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPXEADYTAPIYAPQN 640
+ P+ Y V +I + +D VNI A+D+Y P +P A ++ P N
Sbjct: 168 VYYSPDYYGEEY-PVQAIADNLDFVNIMAYDFYGPGWSPVTGP-PAALFDPSN 218
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 32.3 bits (70), Expect = 0.29
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +2
Query: 206 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 307
++ + +R +F +S++ +A GF G+DL+W+ P
Sbjct: 79 IVSNRTSRESFISSSISIARSLGFYGLDLAWEYP 112
>At2g22650.1 68415.m02684 FAD-dependent oxidoreductase family
protein
Length = 420
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 272 GFDGIDLSWQLPKRKPKKIRSSI 340
GF GI ++W L K PK++R S+
Sbjct: 30 GFAGISVAWHLLKESPKELRLSV 52
>At1g67790.1 68414.m07736 expressed protein
Length = 576
Score = 29.1 bits (62), Expect = 2.7
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Frame = -2
Query: 510 ELFTFGKTLITNCILGFTLSACFISRTRAVKPSL-C---------SDSLSSTGVVPNVFL 361
E F + + N ILG TLS +++ R VK +L C + +S T V V L
Sbjct: 182 EKIPFKQAKLDNNILGETLSNIYLTTYRVVKSALTCMQQIPYFKQTQQISITEVQDKVTL 241
Query: 360 MLCQKDPILERIFF 319
+L K P+ E +FF
Sbjct: 242 LLLSKPPV-EPLFF 254
>At5g42390.1 68418.m05161 metalloendopeptidase identical to
chloroplast processing enzyme metalloendopeptidase
[Arabidopsis thaliana] gi|2827039|gb|AAC39482
Length = 1265
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -1
Query: 574 VKCLDVDNVDQVYDAWDVKVNGAIYVWQNADN*LHIGFYIECLF 443
+K DVD + + ++ W N +Y+ + DN I IE +F
Sbjct: 358 IKKWDVDKIRKFHERWYFPANATLYIVGDIDNIPRIVHNIEAVF 401
>At4g05170.1 68417.m00777 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 296
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +2
Query: 371 FGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLV-----ISVLPNVNSSIYFDVPSI 535
FG D+K ++H +G + + L + PN QL+ S +PN S + + P +
Sbjct: 44 FGWQNFDNKINDHNDGCMNMHNSFFEGLLIDPNDQLLPDPWSKSTIPNAKSELLENFPFL 103
Query: 536 INL 544
N+
Sbjct: 104 DNM 106
>At4g18010.2 68417.m02680 inositol polyphosphate 5-phosphatase II
(IP5PII) nearly identical to inositol polyphosphate
5-phosphatase II [Arabidopsis thaliana] GI:10444263
isoform contains an AT-acceptor splice site at intron 6
Length = 613
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 206 LLESPQARTAFTNSALLLAEQYGFDGIDLSW-QLPKRKPKKIRSSIG 343
L E+P + F + A L F+ ++LSW + + KIR+S G
Sbjct: 292 LPENPSGASRFASEARQLKRSRSFETLNLSWNDIKEEDGDKIRNSYG 338
>At3g26920.1 68416.m03368 F-box family protein contains F-box domain
Pfam:PF00646
Length = 565
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 363 LMLCQKDPILERIFFGFLFGNCQ 295
L+L K P LE + GF FG C+
Sbjct: 336 LLLSNKAPFLESLHLGFRFGECR 358
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 28.3 bits (60), Expect = 4.7
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +2
Query: 14 LLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQ 193
LL+ +A A Y + + L ID A +++ Q P LR + VG +
Sbjct: 547 LLFSTASCSARLYTGTPI-QLLVIDEAAQLKECESSIPMQLPGLRHLILVGDERQLPAMV 605
Query: 194 KYNLLLESPQARTAFTNSALLLAEQY 271
+ + LE+ R+ F ALL ++Y
Sbjct: 606 ESQIALEAGFGRSLFERLALLGHKKY 631
>At1g13540.1 68414.m01587 expressed protein
Length = 381
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 140 QLRVFLTVGGDDDTEDPQKYNLLLESPQARTAF 238
+L V +GGDD T DP + +L+ P + +
Sbjct: 65 KLAVTFNIGGDDSTRDPVVFIPVLDKPLSSNCY 97
>At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 888
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 404 EHREGFTALVREMKQALNVKPNMQLVISVLPNVNS 508
EH T+ +R+ + AL+V PN Q ++ + VNS
Sbjct: 851 EHIGDVTSALRDCRAALSVDPNHQEMLELHSRVNS 885
>At3g27220.1 68416.m03403 kelch repeat-containing protein contains
Pfam PF01344: Kelch motif (4 repeats); contains Prosite
PS00334: Myb DNA-binding domain repeat signature 2;
similar to Male enhanced Antigen-1 (peas) (GI:20513270)
[Mus musculus]
Length = 426
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +2
Query: 239 TNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWH 355
T +L+ E + F L+W + R P ++++++ FW+
Sbjct: 355 TKRLVLVGEIFRFQLDTLTWSVIGRLPYRVKTAMAGFWN 393
>At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1036
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 3 SAPICCTNLPASKLTHIKWFHSM 71
S PIC T P+S +H KW H +
Sbjct: 14 SCPICATPFPSSSSSH-KWTHQV 35
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,264,486
Number of Sequences: 28952
Number of extensions: 261584
Number of successful extensions: 843
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -