Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_G12
(371 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0216 + 15804110-15804284,15804341-15804351 30 0.67
06_03_0795 - 24683023-24683155,24685853-24686057,24686275-246864... 30 0.67
07_03_1693 - 28756331-28756435,28756558-28756664,28757114-287572... 29 1.5
03_05_0517 - 25118232-25118730,25119002-25119273 29 1.5
07_03_0817 - 21735283-21735358,21735719-21735796,21735885-217359... 28 2.7
06_02_0155 + 12380452-12381012 27 3.6
04_04_1390 - 33184233-33184478,33184601-33184705,33184783-331848... 27 3.6
12_02_0219 + 15822050-15824896 27 4.7
09_02_0511 - 10079180-10079355,10079656-10079722,10080144-100801... 27 6.2
07_03_1160 - 24430240-24431268 27 6.2
07_03_0202 + 15131001-15131047,15131488-15131754,15131913-151319... 27 6.2
03_02_0260 - 6924532-6924757,6925443-6925546,6925729-6926007,692... 27 6.2
02_04_0273 + 21454795-21454925,21454962-21455193 27 6.2
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 27 6.2
12_01_0014 + 105422-105520,105598-105725,105939-106101,106198-10... 26 8.2
07_01_0601 + 4464745-4465010,4465274-4466582 26 8.2
05_04_0011 + 17139322-17139451,17139552-17140174 26 8.2
03_02_0259 - 6920472-6920579,6920744-6921022,6921115-6921390,692... 26 8.2
02_05_0005 - 24890239-24891419,24891524-24891694,24891810-24892704 26 8.2
02_01_0138 + 999809-999821,1000456-1001341,1001424-1003221,10037... 26 8.2
>12_02_0216 + 15804110-15804284,15804341-15804351
Length = 61
Score = 29.9 bits (64), Expect = 0.67
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 99 SGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAF 221
SG P+ +H V FF+ SN SGNY + G F
Sbjct: 12 SGSPAPPYKNHTVAGADGWFFNATSNTTSGNYSDWAAGETF 52
>06_03_0795 -
24683023-24683155,24685853-24686057,24686275-24686443,
24686590-24686775,24686916-24687124,24687197-24687362
Length = 355
Score = 29.9 bits (64), Expect = 0.67
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 126 HYCRPMEHHYCPPRELCLRQPW 61
HYCR +E+ YC + L R+ W
Sbjct: 181 HYCRSIENWYCLSKTLAEREAW 202
>07_03_1693 -
28756331-28756435,28756558-28756664,28757114-28757245,
28757412-28757478,28757553-28757635,28757824-28757905,
28763101-28763177,28763278-28763361,28763443-28763512,
28763625-28763713,28763801-28764487,28765700-28765997
Length = 626
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 318 NCLS*WRQ-LPFPPRGERVXRIAWVDNWDD*NRRTPVQCLWVHNFR*DRLMVERR 157
N L WR+ LP P ERV W ++ D+ + +Q +V NFR ++E+R
Sbjct: 171 NVLLDWRESLPHPD--ERVEYEFWTNSNDECGAKCDMQMNFVRNFRGTAQVLEKR 223
>03_05_0517 - 25118232-25118730,25119002-25119273
Length = 256
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +3
Query: 150 DPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDXPS 272
D FF++ P GN T P VD P P + + S
Sbjct: 37 DWFFTRKGESPQGNISKEETAPTGVDVTDPGRPGRAFTQDS 77
>07_03_0817 -
21735283-21735358,21735719-21735796,21735885-21735945,
21736038-21736069,21736144-21736221,21738046-21738213,
21738711-21738897,21740019-21740160
Length = 273
Score = 27.9 bits (59), Expect = 2.7
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +3
Query: 147 PDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDXPSRPGGG 287
P PF S P G Y+PI GP V P + P R+ RP G
Sbjct: 216 PVPFGGPGSVPPGGRYDPI--GPPDV----PGFEPSRFVRRPRPPAG 256
>06_02_0155 + 12380452-12381012
Length = 186
Score = 27.5 bits (58), Expect = 3.6
Identities = 17/70 (24%), Positives = 25/70 (35%)
Frame = +3
Query: 108 PSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDXPSRPGGG 287
P+DG+ H +P P NG G P + P Y K+ P G
Sbjct: 29 PNDGDGGHK--PSPPPHAGGAVNGNGGAAPPAPATSPDTEVRAPTYGDKQISPPKEGAAG 86
Query: 288 KVIVSIKISN 317
K + + +N
Sbjct: 87 KPPMVVPAAN 96
>04_04_1390 -
33184233-33184478,33184601-33184705,33184783-33184890,
33184967-33185101,33185263-33185363,33185495-33185564,
33185642-33185758,33186001-33186138,33186371-33186439,
33186556-33186645,33186758-33186940,33187020-33187052
Length = 464
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 234 HPNYPPKRYDXPSRPGGGKVIVSIKISNFKLRKMV 338
HP Y K Y+ PS G KV+ KI+NF M+
Sbjct: 111 HPEYR-KNYNFPSYKEGWKVLREGKITNFMKSTML 144
>12_02_0219 + 15822050-15824896
Length = 948
Score = 27.1 bits (57), Expect = 4.7
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 1 DNSDTIRQ*KLSC-FSSSPYWPWLPQTEFTWWTIVV 105
D D +R+ ++ C F+ P WPWL ++ T+V+
Sbjct: 269 DFGDPLRKHEMHCRFTQGPPWPWLAVAS-SYGTLVI 303
>09_02_0511 -
10079180-10079355,10079656-10079722,10080144-10080181,
10080255-10080336
Length = 120
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 87 VVDNSGVPSDGNSDHVVIANPDPFFSQPSNG 179
+++N+G S GN ++ N PFF SNG
Sbjct: 57 ILNNAGATSKGNYALILPVNEFPFFLVYSNG 87
>07_03_1160 - 24430240-24431268
Length = 342
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +3
Query: 147 PDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP-KRYDXPSRP 278
P P P P+ N P+ P +P+ PP + D P P
Sbjct: 48 PPPLLPTPDVVPNPNQPPLQPTPGVPPLPNPDVPPMNKPDVPPMP 92
>07_03_0202 +
15131001-15131047,15131488-15131754,15131913-15131940,
15132120-15132179,15132570-15132696,15132907-15133724
Length = 448
Score = 26.6 bits (56), Expect = 6.2
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +3
Query: 75 NRVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGP----SGNYEPISTGPAFVDFN 233
NR+HV+D + V I+ PDP +P + P S P + +F +FN
Sbjct: 19 NRLHVLDPPCPSPVAAGEKVSISAPDPISHKPVSRPKVPVSDGNAPNAISKSFFNFN 75
>03_02_0260 -
6924532-6924757,6925443-6925546,6925729-6926007,
6926093-6926368,6926460-6926678,6926758-6926926,
6927208-6927382,6927489-6927600,6929566-6929820
Length = 604
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 87 VVDNSGVPSDGNSDHVVIANPDPFFSQP 170
V++N +P N HVV+ANP P P
Sbjct: 248 VLENCQLPH-ANHGHVVLANPSPILFYP 274
>02_04_0273 + 21454795-21454925,21454962-21455193
Length = 120
Score = 26.6 bits (56), Expect = 6.2
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -1
Query: 275 ARGXVVSLGWIIGMIEIDE--RRSSAYGFIISAR 180
A G ++SLGW+ G + +D RS GF+ S R
Sbjct: 7 AAGQLLSLGWVTGYMILDGFLDRSFLLGFLDSGR 40
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 26.6 bits (56), Expect = 6.2
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 99 SGVPSD-GNSDHVVIANPDPFF-SQPSNGPSGNYEPIST 209
SG PS GN+ + ++P PF S PS+G SGNY + T
Sbjct: 464 SGSPSHRGNAG--MKSSPSPFAPSGPSSGGSGNYGRLPT 500
>12_01_0014 +
105422-105520,105598-105725,105939-106101,106198-106310,
106787-106825,107026-107109,107193-107241,107331-107422,
107680-107809,107906-107982,108058-109676,110024-110221,
110287-110825
Length = 1109
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
Frame = +3
Query: 153 PFFSQPSNGPSG------NYEPISTGPAFVDFNHPNYPP 251
P FS P+ P+G ++E ++ P F N PN PP
Sbjct: 875 PGFSAPARVPTGFSSGFSSHEGLNPPPGFSSHNGPNPPP 913
>07_01_0601 + 4464745-4465010,4465274-4466582
Length = 524
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 123 SDHVVIANPDPFFSQPSNGPSGNYEPISTGPA 218
SDH V+ P PF P++ + + PI T PA
Sbjct: 50 SDHFVLT-PPPFQITPTSIQNSTWLPIPTSPA 80
>05_04_0011 + 17139322-17139451,17139552-17140174
Length = 250
Score = 26.2 bits (55), Expect = 8.2
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +3
Query: 147 PDPFFSQPSNGPS--GNYEPIS-TGPAFV--DFNHPNYPPKRYDXPSRPGGGKVI 296
P P P NG + GN + ++ TGP + +F P PP PS P GGKVI
Sbjct: 69 PPPPPPSPPNGGNVIGNGKRLTPTGPDPIHNEFQPPPPPPP----PSPPNGGKVI 119
>03_02_0259 -
6920472-6920579,6920744-6921022,6921115-6921390,
6921473-6921691,6921795-6921963,6922248-6922422,
6922490-6922601,6923343-6923573
Length = 522
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 87 VVDNSGVPSDGNSDHVVIANPDPFFSQP 170
V++N +P N HV++ANP P P
Sbjct: 240 VLENCQLPHP-NHGHVILANPSPILCYP 266
>02_05_0005 - 24890239-24891419,24891524-24891694,24891810-24892704
Length = 748
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = -1
Query: 326 KFKIAYLNGDNYLSPPGARGXVVSLGWIIGMIEIDERRSSAYGFIISAR 180
+F+ Y+ +++ G + +V L W++G E R +A G++ +R
Sbjct: 219 EFRTTYVTTGDFVESTGGKVPLV-LDWVVGKKTCREARRNATGYMCVSR 266
>02_01_0138 +
999809-999821,1000456-1001341,1001424-1003221,
1003716-1003805,1004034-1004111,1004513-1004518,
1004849-1004958,1005174-1005369
Length = 1058
Score = 26.2 bits (55), Expect = 8.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 122 IAVRWNTTIVHHVNSV 75
IA RW T ++HHVNS+
Sbjct: 507 IAGRWLTQMLHHVNSL 522
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,256,274
Number of Sequences: 37544
Number of extensions: 237755
Number of successful extensions: 563
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 588739508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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