Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_G11
(453 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defecti... 37 0.006
U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defecti... 37 0.006
U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defecti... 37 0.006
Z81483-3|CAB03961.1| 152|Caenorhabditis elegans Hypothetical pr... 30 0.69
Z81483-2|CAB03959.1| 154|Caenorhabditis elegans Hypothetical pr... 30 0.69
AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral signa... 29 1.2
Z50028-4|CAL36519.1| 298|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z50028-3|CAL36518.1| 320|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z50028-1|CAL36517.1| 471|Caenorhabditis elegans Hypothetical pr... 29 1.6
DQ365983-1|ABD14368.1| 298|Caenorhabditis elegans intraflagella... 29 1.6
DQ360813-1|ABC88650.1| 320|Caenorhabditis elegans intraflagella... 29 1.6
DQ360812-1|ABC88649.1| 474|Caenorhabditis elegans intraflagella... 29 1.6
AF016672-8|AAB66117.4| 998|Caenorhabditis elegans Jnk interacti... 29 2.1
Z54237-1|CAA90987.2| 445|Caenorhabditis elegans Hypothetical pr... 28 3.7
AL031627-24|CAA20943.2| 168|Caenorhabditis elegans Hypothetical... 28 3.7
Z69662-5|CAA93500.3| 449|Caenorhabditis elegans Hypothetical pr... 27 4.8
U40029-8|AAA81128.2| 275|Caenorhabditis elegans Hypothetical pr... 27 6.4
U23510-7|AAC46785.1| 261|Caenorhabditis elegans Hypothetical pr... 27 6.4
AL032635-3|CAB63374.1| 635|Caenorhabditis elegans Hypothetical ... 27 6.4
Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical pr... 27 8.4
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 8.4
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 8.4
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 27 8.4
AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha ki... 27 8.4
AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic tr... 27 8.4
>U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defective
protein 9, isoforma protein.
Length = 357
Score = 37.1 bits (82), Expect = 0.006
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 123 NRESNNNLNLATGQTINEVLHRLED-NYNEVDNSFLVPVVNSNVDTHVDQARIKPIEEEI 299
N +NNN N A + + LED +YN + S PVV+ V TH R +P ++I
Sbjct: 76 NGHNNNNNNHAVNNNLRTIKMELEDPDYNLIAKSAPTPVVSKIVATHTVTPRSRPTPKDI 135
>U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defective
protein 9, isoformd protein.
Length = 452
Score = 37.1 bits (82), Expect = 0.006
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 123 NRESNNNLNLATGQTINEVLHRLED-NYNEVDNSFLVPVVNSNVDTHVDQARIKPIEEEI 299
N +NNN N A + + LED +YN + S PVV+ V TH R +P ++I
Sbjct: 171 NGHNNNNNNHAVNNNLRTIKMELEDPDYNLIAKSAPTPVVSKIVATHTVTPRSRPTPKDI 230
>U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defective
protein 9, isoformc protein.
Length = 537
Score = 37.1 bits (82), Expect = 0.006
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 123 NRESNNNLNLATGQTINEVLHRLED-NYNEVDNSFLVPVVNSNVDTHVDQARIKPIEEEI 299
N +NNN N A + + LED +YN + S PVV+ V TH R +P ++I
Sbjct: 154 NGHNNNNNNHAVNNNLRTIKMELEDPDYNLIAKSAPTPVVSKIVATHTVTPRSRPTPKDI 213
>Z81483-3|CAB03961.1| 152|Caenorhabditis elegans Hypothetical
protein C43D7.5 protein.
Length = 152
Score = 30.3 bits (65), Expect = 0.69
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +3
Query: 6 LDSDVEINLLDQKDNCDKENNLPINKNNEIS-ENTTEHFGNRESNNNLNLATGQTINEVL 182
++++V+ + ++KDNCD N + + + +NTT + N+N N +N +
Sbjct: 4 VNANVDTKVDNRKDNCDNTNTYSHTVDRKDNFDNTTTNTKTVNRNDNCNNQEEGDVN--M 61
Query: 183 HRLEDNYN--EVDNS 221
+R DN N E NS
Sbjct: 62 YRRNDNCNNREATNS 76
>Z81483-2|CAB03959.1| 154|Caenorhabditis elegans Hypothetical
protein C43D7.4 protein.
Length = 154
Score = 30.3 bits (65), Expect = 0.69
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +3
Query: 12 SDVEINLLDQKDNCDKEN---NLPINKNNEISENTTEHFGNRESNNNLNLATGQTINEVL 182
++V+ N+ ++KDNCD N + K+N + NT H NR+ N + N G +N L
Sbjct: 6 ANVDTNIDNRKDNCDNRNTNSHSVDRKDNFGNTNTNLHSVNRKDNCD-NREDGD-MN--L 61
Query: 183 HRLEDNYN 206
+ EDN N
Sbjct: 62 YYREDNCN 69
>AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral
signaling target protein 2 protein.
Length = 661
Score = 29.5 bits (63), Expect = 1.2
Identities = 19/66 (28%), Positives = 27/66 (40%)
Frame = +3
Query: 96 SENTTEHFGNRESNNNLNLATGQTINEVLHRLEDNYNEVDNSFLVPVVNSNVDTHVDQAR 275
SE N E ++ + NEV E E DN + S VDTH+D+ R
Sbjct: 362 SEENVSQIENEEGDDEAIGTNSNSSNEVTESPE-TIEEPDNVDMEESSESEVDTHIDETR 420
Query: 276 IKPIEE 293
+ +E
Sbjct: 421 NESDDE 426
>Z50028-4|CAL36519.1| 298|Caenorhabditis elegans Hypothetical
protein F46F6.4d protein.
Length = 298
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 102 NTTEHFGNRESNNNLNLATGQTINEV 179
N ++HF N NNNL TG+T++ +
Sbjct: 271 NNSQHFRNLAQNNNLGGETGETMDRL 296
>Z50028-3|CAL36518.1| 320|Caenorhabditis elegans Hypothetical
protein F46F6.4c protein.
Length = 320
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 102 NTTEHFGNRESNNNLNLATGQTINEV 179
N ++HF N NNNL TG+T++ +
Sbjct: 293 NNSQHFRNLAQNNNLGGETGETMDRL 318
>Z50028-1|CAL36517.1| 471|Caenorhabditis elegans Hypothetical
protein F46F6.4a protein.
Length = 471
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 102 NTTEHFGNRESNNNLNLATGQTINEV 179
N ++HF N NNNL TG+T++ +
Sbjct: 444 NNSQHFRNLAQNNNLGGETGETMDRL 469
>DQ365983-1|ABD14368.1| 298|Caenorhabditis elegans intraflagellar
transport proteinvariant c protein.
Length = 298
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 102 NTTEHFGNRESNNNLNLATGQTINEV 179
N ++HF N NNNL TG+T++ +
Sbjct: 271 NNSQHFRNLAQNNNLGGETGETMDRL 296
>DQ360813-1|ABC88650.1| 320|Caenorhabditis elegans intraflagellar
transport proteinvariant b protein.
Length = 320
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 102 NTTEHFGNRESNNNLNLATGQTINEV 179
N ++HF N NNNL TG+T++ +
Sbjct: 293 NNSQHFRNLAQNNNLGGETGETMDRL 318
>DQ360812-1|ABC88649.1| 474|Caenorhabditis elegans intraflagellar
transport proteinvariant a protein.
Length = 474
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 102 NTTEHFGNRESNNNLNLATGQTINEV 179
N ++HF N NNNL TG+T++ +
Sbjct: 447 NNSQHFRNLAQNNNLGGETGETMDRL 472
>AF016672-8|AAB66117.4| 998|Caenorhabditis elegans Jnk interacting
protein (scaffoldprotein) protein 1 protein.
Length = 998
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 DLDSDVEINLLDQKDNCDKENNLPINKNNEI-SENTTEHF 119
++ SD+E N+ ++++ D+E+ + K E+ EN T +F
Sbjct: 336 NIGSDLEDNITEEEEEDDEEDEEDVRKTEEVWPENATANF 375
>Z54237-1|CAA90987.2| 445|Caenorhabditis elegans Hypothetical
protein T11B7.1 protein.
Length = 445
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 57 KENNLPINKNNEISENTTEHFGNRESNNNLNLATGQTINEVLHRLEDNYNEVDNS 221
K+N +P N+ +E T +FG R N+ NL E L +++ D S
Sbjct: 373 KKNFIPKNEISEDLAKTVRNFGKRLRNSRGNLKNAFKELEALKEVQEEEGSSDES 427
>AL031627-24|CAA20943.2| 168|Caenorhabditis elegans Hypothetical
protein Y102A5C.2 protein.
Length = 168
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 78 NKNNEISENTTEHFGNRESNNNLNLATGQTINEVLHRLED-NYNEVDNSFLV--PVVNSN 248
N+N+E+ E H E N N E+ ++ED N DN+ +V P N
Sbjct: 79 NQNDEVREAAENHSNREEDQNVENQPIPPGDAEIRVQIEDENGENQDNNIIVINPPNRQN 138
Query: 249 VDTHVDQARIKPIEEEI 299
V+ D A +EE+
Sbjct: 139 VEAEPD-AEQPQFDEEL 154
>Z69662-5|CAA93500.3| 449|Caenorhabditis elegans Hypothetical
protein F56D5.6 protein.
Length = 449
Score = 27.5 bits (58), Expect = 4.8
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +3
Query: 21 EINLLDQKD-NCDKENNLPINKNNEISENTTEHFGNRESNNNLNLATGQTINEVL---HR 188
E+ +Q D N ++ ++LP N++ +++ E G E NN+ ++ N +L
Sbjct: 250 EVQTGNQDDGNSEQSSDLPKNRDRIDTDSAVEEVGEPEKNNDNVEEVNESGNVILDEDEN 309
Query: 189 LEDN 200
+EDN
Sbjct: 310 IEDN 313
>U40029-8|AAA81128.2| 275|Caenorhabditis elegans Hypothetical
protein F10G7.3 protein.
Length = 275
Score = 27.1 bits (57), Expect = 6.4
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +3
Query: 21 EINLLDQKDNCDKENNLPINKNNEISENTTEHFGNRESNNNL-NLATGQTINEVLHRLED 197
E +L+ D+ ++++ ++E+ N E N N L N G ++ED
Sbjct: 174 EDDLMPLNDDGQEDDDEEEEDDDEMEANAEEVDLNESFNERLANALDGAEQKGADEKMED 233
Query: 198 N--YNEVDNSFLVPVVNSNVDTHVDQARIKPIEEE 296
+ +VD + P V N DT V ++ +P+ ++
Sbjct: 234 DGANEDVDMADDEPGVQINTDTKVPESMAEPLSDK 268
>U23510-7|AAC46785.1| 261|Caenorhabditis elegans Hypothetical
protein R12C12.6a protein.
Length = 261
Score = 27.1 bits (57), Expect = 6.4
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = -3
Query: 112 SVVFSDISLFLFIGRLF--SLSQLSFWSN 32
SV+FSD+ ++LFI LF +LSQ +N
Sbjct: 42 SVIFSDLMIYLFIALLFLPALSQAGTEAN 70
>AL032635-3|CAB63374.1| 635|Caenorhabditis elegans Hypothetical
protein Y51A2A.5 protein.
Length = 635
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 195 DNYNEVDNSFLVPVVNSNVDTHVDQARIKPIEEEIGFC 308
+N+ V NS V V+SNV +++ + +EEE C
Sbjct: 317 NNHTVVFNSLNVDPVSSNVQKNIETVEMDKVEEECINC 354
>Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 225 LVPVVNSNVDTHVDQARIKPIE 290
L+P+ SN++TH Q +IKP++
Sbjct: 540 LMPIEKSNIETHT-QPQIKPVQ 560
>Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 225 LVPVVNSNVDTHVDQARIKPIE 290
L+P+ SN++TH Q +IKP++
Sbjct: 540 LMPIEKSNIETHT-QPQIKPVQ 560
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 26.6 bits (56), Expect = 8.4
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = +3
Query: 15 DVEINLLDQKDNCDKENNLPINKNNEISENTTEHFGNRESNNNLNLATGQTINEVLHRLE 194
DVE + D + + E ++P + E +EHF + E + +G+++ E
Sbjct: 1927 DVETDRRDSERSLKSERSIPEIHTSPSEEQQSEHFESAEHTEDQGRDSGRSLKSDRSIPE 1986
Query: 195 DNYNEVDN 218
+ E D+
Sbjct: 1987 VQFTESDS 1994
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 26.6 bits (56), Expect = 8.4
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = +3
Query: 15 DVEINLLDQKDNCDKENNLPINKNNEISENTTEHFGNRESNNNLNLATGQTINEVLHRLE 194
DVE + D + + E ++P + E +EHF + E + +G+++ E
Sbjct: 1927 DVETDRRDSERSLKSERSIPEIHTSPSEEQQSEHFESAEHTEDQGRDSGRSLKSDRSIPE 1986
Query: 195 DNYNEVDN 218
+ E D+
Sbjct: 1987 VQFTESDS 1994
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 26.6 bits (56), Expect = 8.4
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 36 DQKDNCDKENNLPINKNNEISENTTEHFGNRESNNNLNLATGQ 164
D+ DN + +N + N E S+N E ES+N G+
Sbjct: 232 DESDNGEASDNGEESDNEEASDNGEESDNGEESDNGEERGNGE 274
>AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha
kinase protein.
Length = 1077
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 225 LVPVVNSNVDTHVDQARIKPIE 290
L+P+ SN++TH Q +IKP++
Sbjct: 540 LMPIEKSNIETHT-QPQIKPVQ 560
>AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic
translation initiationfactor 2 alpha kinase PEK protein.
Length = 1077
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 225 LVPVVNSNVDTHVDQARIKPIE 290
L+P+ SN++TH Q +IKP++
Sbjct: 540 LMPIEKSNIETHT-QPQIKPVQ 560
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,732,700
Number of Sequences: 27780
Number of extensions: 163787
Number of successful extensions: 580
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -