Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_G10
(530 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 25 0.67
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 25 0.67
U88176-2|AAO91740.3| 550|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 29 2.7
AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical... 29 2.7
U28928-7|AAA68339.1| 665|Caenorhabditis elegans Peroxisomal mem... 28 3.6
AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical ... 28 4.8
Z69716-4|CAA93528.1| 480|Caenorhabditis elegans Hypothetical pr... 27 8.4
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 25.0 bits (52), Expect(2) = 0.67
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +1
Query: 301 CATLKCSCGMNPSRTVIGLRSA-CPMEMRC 387
CAT++CS G ++ A CP C
Sbjct: 381 CATMRCSAGTTCQEALVKCAKAPCPSHAAC 410
Score = 24.2 bits (50), Expect(2) = 0.67
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 283 NVYHTKCATLKCSCG 327
N+ T C+T+KCS G
Sbjct: 335 NIQITPCSTMKCSAG 349
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 25.0 bits (52), Expect(2) = 0.67
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +1
Query: 301 CATLKCSCGMNPSRTVIGLRSA-CPMEMRC 387
CAT++CS G ++ A CP C
Sbjct: 316 CATMRCSAGTTCQEALVKCAKAPCPSHAAC 345
Score = 24.2 bits (50), Expect(2) = 0.67
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 283 NVYHTKCATLKCSCG 327
N+ T C+T+KCS G
Sbjct: 270 NIQITPCSTMKCSAG 284
>U88176-2|AAO91740.3| 550|Caenorhabditis elegans Hypothetical
protein F18F11.4 protein.
Length = 550
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +3
Query: 63 MVVIDWRKGVRRSLSEDDKYSYFTEDVDLNTYMYYLHMN--YPYWMTDEVYGLNKERQGE 236
+V D R LSED + + T ++ + +YYLH+ + + V N
Sbjct: 384 VVHFDMHSVYRNELSEDKTHQHTTIEIYDSLNLYYLHLRRFERHLLNPPVVKYNNRFNSS 443
Query: 237 ILMYANSQLLARL--RME 284
+LM N+++L + RME
Sbjct: 444 LLMKLNTKMLDQFTERME 461
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical protein
Y48A6B.11b protein.
Length = 949
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 72 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 245
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 881 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 938
>Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical protein
Y48A6B.11a protein.
Length = 947
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 72 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 245
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 879 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 936
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 72 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 245
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 881 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 938
>AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 72 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 245
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 879 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 936
>U28928-7|AAA68339.1| 665|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 1 protein.
Length = 665
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 390 VRQNNFVPVTSENLKLKMLLD-DVEQMIREGILTGKIERRDG 512
+R P TS ++K+K + D D+EQM+ LT +ER G
Sbjct: 525 LRDQVIYPDTSFDMKMKGMSDKDLEQMLENVQLTNILEREGG 566
>AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical
protein F37B4.7 protein.
Length = 424
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 72 IDWRKGVRRSLSEDDKYSYFTEDVDLNTYMYYLHM 176
++W++ + L +++ E VD ++YM YL M
Sbjct: 183 VEWKEAYEKKLEDNNVQGNLKEIVDQSSYMDYLRM 217
>Z69716-4|CAA93528.1| 480|Caenorhabditis elegans Hypothetical
protein C04B4.4 protein.
Length = 480
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 279 MERLSHKMCDIKMFMWNEPVKNGYWPKIRLPNGDEMPVRQNNFVP 413
++ S+KM D+K F N+P K+ + + G PV+ N P
Sbjct: 392 LKMTSNKMLDLKGFSMNDPPKSRFAIANQNSEGRASPVQPKNTNP 436
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,128,701
Number of Sequences: 27780
Number of extensions: 219271
Number of successful extensions: 613
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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