Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_G07
(580 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42965| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_34029| Best HMM Match : fn1 (HMM E-Value=2.4) 29 2.7
SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_4755| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_31795| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_26795| Best HMM Match : Exo_endo_phos (HMM E-Value=6.3e-10) 28 6.3
SB_37828| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_10682| Best HMM Match : Pkinase (HMM E-Value=2.5e-07) 27 8.4
SB_2808| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
>SB_42965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 29.5 bits (63), Expect = 2.1
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Frame = +2
Query: 248 KTDYAGDRASFGAGQTKTGPRVSWKLYPIWYKNKVYFKILNTYHTQYLKLEVKADDAGDH 427
KT Y + G K R+ K ++ K + I NT+ Q E +
Sbjct: 534 KTHYQQGKYEEAIGHYKEALRLYQKTSDDQWQGKAHILIGNTHDQQGKYEEARGHYKEAL 593
Query: 428 KAWGANEEDTWRHEWYFR-PVVHDSQILFYIYNRHYEQALKL-GRAVDDYG 574
+ + + +D W+ + + HD Q + HY++AL+L + DD G
Sbjct: 594 RLYQKSSDDQWQGKAHILIGNTHDQQGKYEEARGHYKEALRLYQKTSDDQG 644
>SB_34029| Best HMM Match : fn1 (HMM E-Value=2.4)
Length = 182
Score = 29.1 bits (62), Expect = 2.7
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +2
Query: 158 YFPIEFRLLFNEDPVLIT------NKRDELALKLELKTDYAGDRASFGAGQTKTGPRVSW 319
Y P+E +L++++D + NK DE++ + D D+ K+ ++ W
Sbjct: 81 YNPLEKQLVYDKDTGQVNWKVKPLNKLDEISAHHDFCYDMGKDKGDCDRRMVKSIDQIPW 140
Query: 320 KLYPIWYKNKVYFKILNTYHTQYLKLEVKADDAG 421
K P W V ++NT TQ L L VK G
Sbjct: 141 KEKP-WGATAVR-NVINT--TQKLGLGVKKSKNG 170
>SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 33 KRNAEVTSSAPS*INYSSKDNQTSSNTLTVSGTDP 137
+ N +VT P ++YSS D+ N GT+P
Sbjct: 820 RHNDDVTDKKPRLVDYSSADSSDHDNAADNKGTEP 854
>SB_4755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 29.1 bits (62), Expect = 2.7
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +2
Query: 158 YFPIEFRLLFNEDPVLIT------NKRDELALKLELKTDYAGDRASFGAGQTKTGPRVSW 319
Y P+E +L++++D + NK DE++ + D D+ K+ ++ W
Sbjct: 81 YNPLEKQLVYDKDTGQVNWKVKPLNKLDEISAHHDFCYDMGKDKGDCDRRMVKSIDQIPW 140
Query: 320 KLYPIWYKNKVYFKILNTYHTQYLKLEVKADDAG 421
K P W V ++NT TQ L L VK G
Sbjct: 141 KEKP-WGATAVR-NVINT--TQKLGLGVKKSKNG 170
>SB_31795| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1525
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 404 KADDAGDHKAWGANEEDTWRHEWYFR 481
+A D GD W +EDTWR WY R
Sbjct: 630 EALDKGD--CWSTEQEDTWR-TWYIR 652
>SB_26795| Best HMM Match : Exo_endo_phos (HMM E-Value=6.3e-10)
Length = 609
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 29 LEKECRSDVISSVVNKLLLE-GQPNVVEYAYSLWYRSGEDIVKVYFPIE 172
L RSD+ + L++E +PN + + WYR + VK++ E
Sbjct: 245 LSHTLRSDLADPYLEMLIIEIKKPNTKPFLIATWYRPPKSSVKLFESFE 293
>SB_37828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 293 TKTGPRVSW-KLYPIWYKNKVYFKILNTYHTQYLKLEVKADDAGDHKAWGANEEDTWRHE 469
T T P + W +L + + + H+ + V+A DAG +K + AN+ + HE
Sbjct: 294 TSTNPEIDWERLNGVLPSERA--TLSREPHSSLVIARVEASDAGRYKCYAANDYGSIFHE 351
Query: 470 W 472
+
Sbjct: 352 F 352
>SB_10682| Best HMM Match : Pkinase (HMM E-Value=2.5e-07)
Length = 165
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +2
Query: 35 KECRSDVISSVVNKLLLEGQPNVVEYAYSLWYRSGEDIVKVYFPIEFRLLFNEDP 199
K C + SV N G P++ +Y + WYR+ E ++ F +F +P
Sbjct: 96 KICDFGLARSVSNITQEAGDPSLTDYVATRWYRAPEILLASPRKATFSWIFYIEP 150
>SB_2808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 443 NEEDTWRHEWYFRPV 487
N +D W+H+WY RPV
Sbjct: 2 NSQDLWQHQWY-RPV 15
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,901,289
Number of Sequences: 59808
Number of extensions: 345336
Number of successful extensions: 885
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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