Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_G07
         (580 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98866-24|CAB11568.2|  366|Caenorhabditis elegans Hypothetical p...    30   1.4  
AF047658-1|AAC04418.2|  348|Caenorhabditis elegans Hypothetical ...    29   2.4  
Z68335-3|CAA92730.2|  540|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p...    28   4.2  
Z46996-2|CAA87102.1|  679|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z71259-6|CAA95792.1|  328|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z68753-2|CAD56618.1|  480|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z68753-1|CAA92989.1|  499|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical pr...    27   7.3  
U64846-9|AAG24117.3|  343|Caenorhabditis elegans Serpentine rece...    27   7.3  
Z98866-15|CAB11554.2|  335|Caenorhabditis elegans Hypothetical p...    27   9.6  
AL132862-34|CAB60536.2|  395|Caenorhabditis elegans Hypothetical...    27   9.6  
AL034488-4|CAA22449.1|  497|Caenorhabditis elegans Hypothetical ...    27   9.6  

>Z98866-24|CAB11568.2|  366|Caenorhabditis elegans Hypothetical
           protein Y49E10.25 protein.
          Length = 366

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 74  KLLLEGQPNVVEYAYSLWYRSGEDIVKVYFPIEFRLLFNEDPV 202
           KL+  GQP V +Y ++ W+          FP  FR++ + DP+
Sbjct: 260 KLVTFGQPRVADYDHAAWH-------DATFPYSFRVINSRDPI 295


>AF047658-1|AAC04418.2|  348|Caenorhabditis elegans Hypothetical
           protein K03H6.2 protein.
          Length = 348

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 74  KLLLEGQPNVVEYAYSLWYRS 136
           KLL  GQP   +YAYS W+++
Sbjct: 227 KLLTAGQPRTGDYAYSNWHQN 247


>Z68335-3|CAA92730.2|  540|Caenorhabditis elegans Hypothetical
           protein C29F4.2 protein.
          Length = 540

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 490 YDWTEIPLMSPSVFFVSPPRFMVTGVISLHF 398
           YDW  IPLM P + F++   + +  ++S  F
Sbjct: 227 YDWVPIPLMYPQLVFMAIHCYYLVCLVSRQF 257


>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
           protein F44D12.1 protein.
          Length = 1034

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -2

Query: 471 HSCLQVSSSLAPHALWSPAS 412
           HS +  SS+ AP ALWSP+S
Sbjct: 448 HSEISSSSTAAPTALWSPSS 467


>Z46996-2|CAA87102.1|  679|Caenorhabditis elegans Hypothetical
           protein C34C12.2 protein.
          Length = 679

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -3

Query: 449 LR*PPTLYGHRRHQPSLQVS--SIAYDMCSKF 360
           LR PP   G RRH PS   S  S+ +  CS+F
Sbjct: 604 LRRPPEWKGQRRHAPSYVKSRESVTFRGCSRF 635


>Z71259-6|CAA95792.1|  328|Caenorhabditis elegans Hypothetical
           protein F13G3.6 protein.
          Length = 328

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = +2

Query: 179 LLFNEDPVLITNKRDELALKLELKTDYAGDRASFGAGQTKTGPRVSWKLYPIWYKNKVYF 358
           L FN+   + +  R +  L+L  K   +GD   F  GQ    P  S   Y  W  + +  
Sbjct: 97  LCFNDADDVSSPNRIKSQLELATKLSKSGDDLIFVGGQFHRLPEGSTTRYTKWANSMIGD 156

Query: 359 KILNTYHTQY 388
           KI +  +T +
Sbjct: 157 KIRSQVYTSH 166


>Z68753-2|CAD56618.1|  480|Caenorhabditis elegans Hypothetical
           protein ZC518.1b protein.
          Length = 480

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -1

Query: 496 IMYDWTEIPLMSPSVFFVSPPRFMVTGVISLHF 398
           + YDW  +PL+ P V F++   + +  +I   F
Sbjct: 226 LKYDWVPVPLVYPQVIFLAVRIYFMICLIGRQF 258


>Z68753-1|CAA92989.1|  499|Caenorhabditis elegans Hypothetical
           protein ZC518.1a protein.
          Length = 499

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -1

Query: 496 IMYDWTEIPLMSPSVFFVSPPRFMVTGVISLHF 398
           + YDW  +PL+ P V F++   + +  +I   F
Sbjct: 226 LKYDWVPVPLVYPQVIFLAVRIYFMICLIGRQF 258


>Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical
           protein F45H7.6 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 173 FRLLFNEDPVLITNKRDELALKLELKTDYAG 265
           FR++ N DP ++   R  +  + EL  DY G
Sbjct: 534 FRIILNVDPFVLKKSRLHIRFEGELALDYGG 564


>Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical
           protein F45H7.6 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 173 FRLLFNEDPVLITNKRDELALKLELKTDYAG 265
           FR++ N DP ++   R  +  + EL  DY G
Sbjct: 534 FRIILNVDPFVLKKSRLHIRFEGELALDYGG 564


>U64846-9|AAG24117.3|  343|Caenorhabditis elegans Serpentine
           receptor, class h protein193 protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 16/58 (27%), Positives = 33/58 (56%)
 Frame = -1

Query: 484 WTEIPLMSPSVFFVSPPRFMVTGVISLHFKFQVLRMICVQNFKVHLILIPDRI*FPAH 311
           +T++PL+  ++  +S   +MV  ++S+ F+ +    IC  +FK H + +  R+   AH
Sbjct: 92  YTDVPLVYQTIIMMSLFAYMVISIVSI-FENRFFN-ICTFSFKHHWVFL-RRLWLAAH 146


>Z98866-15|CAB11554.2|  335|Caenorhabditis elegans Hypothetical
           protein Y49E10.18 protein.
          Length = 335

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 74  KLLLEGQPNVVEYAYSLWYRSGEDIVKVYFPIEFRLLFNEDPV 202
           KL+  GQP   +Y Y++W+          FP  FR++ + D V
Sbjct: 227 KLVTMGQPRTGDYDYAVWHDK-------TFPYSFRIVHHRDIV 262


>AL132862-34|CAB60536.2|  395|Caenorhabditis elegans Hypothetical
           protein Y73F8A.11 protein.
          Length = 395

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 11/48 (22%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -1

Query: 535 LVMSVVNVEQYLTIM--YDWTEIPLMSPSVFFVSPPRFMVTGVISLHF 398
           ++M++    Q + ++  YDW  IP+  P V F++   + +  ++S  +
Sbjct: 211 VLMNIKEFRQSMEMLTKYDWVPIPIAYPQVVFLAVRVYFIICLVSRQY 258


>AL034488-4|CAA22449.1|  497|Caenorhabditis elegans Hypothetical
           protein Y54G11A.4 protein.
          Length = 497

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 449 EDTWRHEWYFRPVVHDSQILFYIYNRHYEQALKL 550
           ED WR  W      +    LF+I +  YE AL++
Sbjct: 241 EDDWRQGWMLAAHNYWHTALFHIESAEYEPALEI 274


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,641,147
Number of Sequences: 27780
Number of extensions: 263929
Number of successful extensions: 711
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)