Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_G04
(551 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2E1P5.01c |mns1|SPAPB1E7.13c|mannosyl-oligosaccharide 1,2-al... 30 0.26
SPAC25B8.16 |||RNase P and RNase MRP subunit |Schizosaccharomyce... 27 1.4
SPBC17A3.01c |tim50|SPBC8D2.21c|TIM23 translocase complex subuni... 27 1.4
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 27 1.8
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 27 1.8
SPBC21C3.03 |||ABC1 kinase family protein|Schizosaccharomyces po... 27 2.4
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 27 2.4
SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subun... 27 2.4
SPAPB24D3.03 |||agmatinase |Schizosaccharomyces pombe|chr 1|||Ma... 27 2.4
SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces pom... 26 3.2
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 26 4.2
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 26 4.2
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 26 4.2
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 26 4.2
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 26 4.2
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 26 4.2
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 26 4.2
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 26 4.2
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 26 4.2
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 26 4.2
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 26 4.2
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 25 5.6
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 25 5.6
SPAC29B12.10c |||OPT oligopeptide transporter family|Schizosacch... 25 5.6
SPAP27G11.05c |vps41||vacuolar protein sorting-associated protei... 25 7.4
SPAC1687.20c |mis6||inner centromere protein Mis6|Schizosaccharo... 25 7.4
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 25 9.8
>SPAC2E1P5.01c |mns1|SPAPB1E7.13c|mannosyl-oligosaccharide
1,2-alpha-mannosidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 521
Score = 29.9 bits (64), Expect = 0.26
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 522 SNVNLGNLTSTRRSRKLFISTRRS 451
SNVNLG S +R+R+ F+ST S
Sbjct: 175 SNVNLGTRKSRKRTREYFVSTAES 198
>SPAC25B8.16 |||RNase P and RNase MRP subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 698
Score = 27.5 bits (58), Expect = 1.4
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +2
Query: 284 PKSVEFMNVIDHFYYTESSNFDAXILRMPYRSNKYAMYIIVPNSLTGLP-RVLNSLSDLR 460
P F N H + +SS + + + YR + +I+P R + +R
Sbjct: 436 PSFAVFENKNRHTHEKKSSEKEVIPVYITYRKEWNGLTVILPWDYAKFVWRKMMYQKGIR 495
Query: 461 VE-MNNLRERLVDVRLPKFTFEYPSRLNGVL 550
+ NL + + R+P F +YP ++G L
Sbjct: 496 FGGLENLHQIAFEKRMPFFPIDYPDTISGQL 526
>SPBC17A3.01c |tim50|SPBC8D2.21c|TIM23 translocase complex subunit
Tim50 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 27.5 bits (58), Expect = 1.4
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +1
Query: 193 YKHPVFQRKLASPVPTEYDKTWTIL 267
Y+ P F++ L P+P Y++ +T++
Sbjct: 156 YQEPAFEKLLPDPLPEPYNRPYTLV 180
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 27.1 bits (57), Expect = 1.8
Identities = 21/100 (21%), Positives = 41/100 (41%)
Frame = +2
Query: 251 KPGPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRMPYRSNKYAMYIIVPNSLTGLP 430
KPGP YV+ S K + ++ Y S+ +L + N I+ +S +
Sbjct: 291 KPGPLYVNVDSGKPTSTVEGLEQGYVVVDSDKRFLLLFSFLKRNLKKKVIVFMSSCASVK 350
Query: 431 RVLNSLSDLRVEMNNLRERLVDVRLPKFTFEYPSRLNGVL 550
+ L+ + + + +L + R FE+ + G+L
Sbjct: 351 YMAELLNYIDLPVLDLHGKQKQQRRTNTFFEFCNAEKGIL 390
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 546 TPFKRDGYSNVNLGNLTSTRRSRKLFISTRRSLKLFRTR 430
TP D S N+G+ +TR S+ L RRS FR R
Sbjct: 83 TPSNLDSPSTQNVGSTNNTRASQSLL---RRSSSFFRRR 118
>SPBC21C3.03 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 674
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 193 YKHPVFQRKLASPVPTEYDKTWTILRI 273
+ P+F RK + +E K W ILRI
Sbjct: 57 FPKPIFARKFTTRQKSEDQKQWRILRI 83
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 549 STPFKRDGYSNVNLGNLTSTRRSRKLFISTRRSL 448
S P K SNV ++S RRSRK S+R S+
Sbjct: 492 SMPHKPASQSNVGPVRISSNRRSRKFSSSSRVSV 525
>SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subunit
Rpc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1165
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 202 PVFQ-RKLASPVPTEYDKTWTILRIAEITKVRGVHERY 312
PV++ +KLA PVPT DK W +L KV+G+ +++
Sbjct: 33 PVYKGKKLADPVPTIEDK-WQLL--PAFLKVKGLVKQH 67
>SPAPB24D3.03 |||agmatinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 385
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 251 KPGPFYVSPKSPKSVEFMNVIDHFY 325
K PFY P + + VEF ++++ Y
Sbjct: 16 KQSPFYAVPSNYEEVEFSSIVEPMY 40
>SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 564
Score = 26.2 bits (55), Expect = 3.2
Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 5/109 (4%)
Frame = +2
Query: 164 DDMIGMVVLIINTLYFKGSWRHQFPPNMTKPGPFY--VSPKSPKSVEFMNVIDHFYYTES 337
+DMI MV +F W + P Y V P + S F + I+ F S
Sbjct: 272 EDMIYMVGRKPKRSFFALPWAAGSHVYINIPSLSYWQVHPFTLASAPFDDFIELFVAVHS 331
Query: 338 SNFDAXILR---MPYRSNKYAMYIIVPNSLTGLPRVLNSLSDLRVEMNN 475
+ R MP+ +++ P SL+ R LNS VE+ N
Sbjct: 332 GFTERLANRLYSMPHEYPNFSLAPGTPESLSNTYRELNSFKSYAVEIEN 380
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 257 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRMPYRSNKYAMYIIVPNSLTG 424
GPFYV KS + +++ D + SS F L YR N Y + S G
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATIDESDIG 1274
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 257 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRMPYRSNKYAMYIIVPNSLTG 424
GPFYV KS + +++ D + SS F L YR N Y + S G
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATIDESDIG 1274
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 257 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRMPYRSNKYAMYIIVPNSLTG 424
GPFYV KS + +++ D + SS F L YR N Y + S G
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATIDESDIG 1274
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 257 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRMPYRSNKYAMYIIVPNSLTG 424
GPFYV KS + +++ D + SS F L YR N Y + S G
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATIDESDIG 1274
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 257 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRMPYRSNKYAMYIIVPNSLTG 424
GPFYV KS + +++ D + SS F L YR N Y + S G
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATIDESDIG 1274
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 257 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRMPYRSNKYAMYIIVPNSLTG 424
GPFYV KS + +++ D + SS F L YR N Y + S G
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATIDESDIG 1274
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 257 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRMPYRSNKYAMYIIVPNSLTG 424
GPFYV KS + +++ D + SS F L YR N Y + S G
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATIDESDIG 1274
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 257 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRMPYRSNKYAMYIIVPNSLTG 424
GPFYV KS + +++ D + SS F L YR N Y + S G
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATIDESDIG 1274
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 257 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRMPYRSNKYAMYIIVPNSLTG 424
GPFYV KS + +++ D + SS F L YR N Y + S G
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATIDESDIG 1274
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 257 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRMPYRSNKYAMYIIVPNSLTG 424
GPFYV KS + +++ D + SS F L YR N Y + S G
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATIDESDIG 1274
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 257 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRMPYRSNKYAMYIIVPNSLTG 424
GPFYV KS + +++ D + SS F L YR N Y + S G
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATIDESDIG 1274
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = -1
Query: 152 IWVSFPVLYLIPRN*FRSQPLQCLKSRQISIQSCKTLERSLQNAVLVQHS 3
+ +S P + + R +C K ++ +I+ CK + +SLQ+++ + S
Sbjct: 393 VCISIPAVGMRESEELRELEFKC-KQQKKTIEECKHISQSLQSSLTAESS 441
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 206 YFKGSWRHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFYYTESSNFD 349
Y+ SW Q N P P V P+ P F ++ Y +E+ ++D
Sbjct: 60 YYDYSWSGQREANQQIPQPVPVQPRYPDEQNF-SMNGETYPSEAYDYD 106
>SPAC29B12.10c |||OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = +2
Query: 188 LIINTLYFKGSWRHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRM 367
+++ LY+KG W + P M F + S S +N F +T+ ++ + M
Sbjct: 420 IVVPILYYKGVWFSNYLP-MLSSSTFDHTGVSYNSSRVLNSDYSFNHTKYESYSPLYMPM 478
Query: 368 PY 373
Y
Sbjct: 479 SY 480
>SPAP27G11.05c |vps41||vacuolar protein sorting-associated protein
Vps41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 886
Score = 25.0 bits (52), Expect = 7.4
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +2
Query: 149 KLVDAD--DMIGMVVLIINTLYFKGSWRHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHF 322
+L+D+ ++ G + + N + S H P + F +SP V N IDH
Sbjct: 303 RLIDSSFKELCGDAIGLANYSRLQPSDYHLLPDPSSNSHSFVISPNDIVYVRERNQIDHV 362
Query: 323 YYTESSNFDA 352
Y S A
Sbjct: 363 KYLVSKEMYA 372
>SPAC1687.20c |mis6||inner centromere protein
Mis6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +2
Query: 437 LNSLSDLRVEMNNLRERLVDVR---LPKFTFEYPSRLNGVL 550
+NS+ L + N +ERL+D R + KFT Y L+ ++
Sbjct: 508 INSMVGLLLLTKNYQERLMDSRIDAISKFTHSYLKSLSEII 548
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/37 (24%), Positives = 18/37 (48%)
Frame = -2
Query: 370 WHPQNLSVKITRFSVIEVIYNVHELHGLW*FRRYVEW 260
W + +++ ++I + H+L G W + R EW
Sbjct: 1160 WSSETINILYQHKGYTKLIMSWHDLSGTWSWARPHEW 1196
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,336,602
Number of Sequences: 5004
Number of extensions: 49682
Number of successful extensions: 158
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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