Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_G04
         (551 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   2.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   4.8  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   6.3  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   8.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   8.3  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   8.3  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 47  FYKTELKSVDFLNTEVAANEINSWV 121
           FY+ E    DF+ T +  N I+ W+
Sbjct: 258 FYEVEGIGYDFIPTVLDRNVIDKWI 282


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 472 VHFNTEVAQAI*NARQTRQRVRNNDI 395
           +  N  +AQ I +A+ T    RNND+
Sbjct: 411 MEINQNIAQNIDHAKNTIIDYRNNDL 436


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +2

Query: 428 PRVLNSLSDLRVEMNNLRERL 490
           P++++SLS+  +  NN  ++L
Sbjct: 312 PKIISSLSNNTIHNNNYNKKL 332


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 158 RPIWVSFPV 132
           RPIW +FP+
Sbjct: 310 RPIWSNFPI 318


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 158 RPIWVSFPV 132
           RPIW +FP+
Sbjct: 310 RPIWSNFPI 318


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +2

Query: 26  FAAIAQEFYKTELKSVDFLNTEVAANEINS 115
           F  + +  YK E  +   + TE  +N +NS
Sbjct: 78  FGIVYKALYKGEQVAAKIIQTEKYSNMLNS 107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,689
Number of Sequences: 438
Number of extensions: 3610
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)