BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_G04
(551 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 81 4e-16
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 81 6e-16
At1g64030.1 68414.m07252 serpin family protein / serine protease... 78 5e-15
At1g62170.1 68414.m07013 serpin family protein / serine protease... 77 8e-15
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 74 7e-14
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 73 1e-13
At2g14540.1 68415.m01628 serpin family protein / serine protease... 71 7e-13
At2g35580.1 68415.m04357 serpin family protein / serine protease... 68 5e-12
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 49 2e-06
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 47 7e-06
At2g31990.1 68415.m03908 exostosin family protein contains Pfam ... 32 0.22
At1g21740.1 68414.m02721 expressed protein contains Pfam domains... 32 0.29
At5g10290.1 68418.m01194 leucine-rich repeat family protein / pr... 31 0.68
At5g13970.1 68418.m01633 expressed protein 30 1.2
At2g15320.1 68415.m01747 leucine-rich repeat family protein cont... 29 1.6
At3g48700.1 68416.m05318 expressed protein similar to PrMC3 [Pin... 28 4.8
At2g34500.1 68415.m04237 cytochrome P450 family protein similar ... 28 4.8
At4g37920.1 68417.m05362 expressed protein 27 6.3
At2g46470.1 68415.m05783 OXA1 protein, putative similar to Oxa1 ... 27 6.3
At5g65240.1 68418.m08207 leucine-rich repeat family protein / pr... 27 8.3
At4g01290.1 68417.m00170 expressed protein 27 8.3
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 81.4 bits (192), Expect = 4e-16
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 11/194 (5%)
Frame = +2
Query: 2 QSVEPRQRFAAIAQEFYKTELKSVDFLNTEVAA-NEINSWVSNTTQGKIPKLVDADDMIG 178
+S+ + F + + Y VDF NE+N+W T G I +++ +DD I
Sbjct: 102 KSLSFKPSFKDLLENSYNATCNQVDFATKPAEVINEVNAWAEVHTNGLIKEIL-SDDSIK 160
Query: 179 MV----VLIINTLYFKGSWRHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFYYTESSNF 346
+ +++ N +YFKG+W +F +TK F++ + V FM Y F
Sbjct: 161 TIRESMLILANAVYFKGAWSKKFDAKLTKSYDFHLLDGTMVKVPFMTNYKKQYLEYYDGF 220
Query: 347 DAXILRMPY--RSNKYAMYIIVPNSLTGLPRVLNSLSDLRVEMNN--LRERLVD--VRLP 508
+LR+PY ++AMYI +PN GLP +L +S ++N R+R++ ++P
Sbjct: 221 --KVLRLPYVEDQRQFAMYIYLPNDRDGLPTLLEEISSKPRFLDNHIPRQRILTEAFKIP 278
Query: 509 KFTFEYPSRLNGVL 550
KF F + + + VL
Sbjct: 279 KFKFSFEFKASDVL 292
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 80.6 bits (190), Expect = 6e-16
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 10/185 (5%)
Frame = +2
Query: 26 FAAIAQEFYKTELKSVDFLNT-EVAANEINSWVSNTTQGKIPKLVDAD--DMIGMVVLII 196
F + + YK VDF + +E+N+W T G I +++ D D I L++
Sbjct: 45 FKDLLENSYKATCSQVDFASKPSEVIDEVNTWAEVHTNGLIKQILSRDSIDTIRSSTLVL 104
Query: 197 -NTLYFKGSWRHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRMPY 373
N +YFKG+W +F NMTK F++ + V FM + Y F +LR+PY
Sbjct: 105 ANAVYFKGAWSSKFDANMTKKNDFHLLDGTSVKVPFMTNYEDQYLRSYDGF--KVLRLPY 162
Query: 374 --RSNKYAMYIIVPNSLTGLPRVLNSL-SDLRVEMNNLRERLVDV---RLPKFTFEYPSR 535
+++MYI +PN GL +L + S+ N++ + V R+PKF F +
Sbjct: 163 IEDQRQFSMYIYLPNDKEGLAPLLEKIGSEPSFFDNHIPLHCISVGAFRIPKFKFSFEFN 222
Query: 536 LNGVL 550
+ VL
Sbjct: 223 ASEVL 227
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 77.8 bits (183), Expect = 5e-15
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Frame = +2
Query: 2 QSVEPRQRFAAIAQEFYKTELKSVDFLN-TEVAANEINSWVSNTTQGKIPKLVDADDMIG 178
+S+ +F + + F+K VDF + E E+NSWV + T I L+ +
Sbjct: 103 KSLPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKEVNSWVEHHTNNLIKDLLPDGSVTS 162
Query: 179 MVVLII-NTLYFKGSWRHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAX 355
+ I N L FKG+W+ F T+ FY+ + SV FM+ ++ Y F
Sbjct: 163 LTNKIYANALSFKGAWKRPFEKYYTRDNDFYLVNGTSVSVPFMSSYENQYVRAYDGF--K 220
Query: 356 ILRMPYR------SNKYAMYIIVPNSLTGLPRVLNSLSD----LRVEMNNLRERLVDVRL 505
+LR+PY+ + K++MY +P+ GL +L ++ L + R+ L R+
Sbjct: 221 VLRLPYQRGSDDTNRKFSMYFYLPDKKDGLDDLLEKMASTPGFLDSHIPTYRDELEKFRI 280
Query: 506 PKFTFEYPSRLNGVL 550
PKF E+ + VL
Sbjct: 281 PKFKIEFGFSVTSVL 295
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 77.0 bits (181), Expect = 8e-15
Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Frame = +2
Query: 41 QEFYKTELKSVDFLN-TEVAANEINSWVSNTTQGKIPKLVDADDMIGMVVLIINT-LYFK 214
+ F+ VDF + E E+N+W S+ T G I L+ + + + + LYFK
Sbjct: 180 KNFFSAAFAQVDFRSKAEEVRTEVNAWASSHTNGLIKDLLPRGSVTSLTDRVYGSALYFK 239
Query: 215 GSWRHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRMPYRSNK--- 385
G+W ++ +MTK PFY+ + SV FM+ + Y F +LR+PYR +
Sbjct: 240 GTWEEKYSKSMTKCKPFYLLNGTSVSVPFMSSFEKQYIAAYDGF--KVLRLPYRQGRDNT 297
Query: 386 ---YAMYIIVPNSLTGLPRVLNSLSDLRVEMNNLR-ERLVDV---RLPKFTFEY 526
+AMYI +P+ L +L ++ +++ ER V V R+PKF E+
Sbjct: 298 NRNFAMYIYLPDKKGELDDLLERMTSTPGFLDSHNPERRVKVGKFRIPKFKIEF 351
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 73.7 bits (173), Expect = 7e-14
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 10/193 (5%)
Frame = +2
Query: 2 QSVEPRQRFAAIAQEFYKTELKSVDFLNTEVAA-NEINSWVSNTTQGKIPKLVDADDMIG 178
+S+ + F + ++ YK DF + V E+NSW T G I +++
Sbjct: 102 KSLSFKPSFKQLLEDSYKAASNQADFQSKAVEVIAEVNSWAEKETNGLITEVLPEGSADS 161
Query: 179 MVVLII-NTLYFKGSWRHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAX 355
M LI N LYFKG+W +F ++T+ G F++ + + FM Y + F
Sbjct: 162 MTKLIFANALYFKGTWNEKFDESLTQEGEFHLLDGNKVTAPFMTSKKKQYVSAYDGF--K 219
Query: 356 ILRMPY----RSNKYAMYIIVPNSLTGLPRVLNSL-SDLRVEMNNLRERLVDVR---LPK 511
+L +PY +++MY +P++ GL +L+ + S N++ R V VR +PK
Sbjct: 220 VLGLPYLQGQDKRQFSMYFYLPDANNGLSDLLDKIVSTPGFLDNHIPRRQVKVREFKIPK 279
Query: 512 FTFEYPSRLNGVL 550
F F + + VL
Sbjct: 280 FKFSFGFDASNVL 292
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 72.9 bits (171), Expect = 1e-13
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Frame = +2
Query: 26 FAAIAQEFYKTELKSVDFLNTEVAA-NEINSWVSNTTQGKIPKLVDAD------DMIGMV 184
F + + YK VDF V +E+N W T G I +++ D ++
Sbjct: 107 FKELLENSYKASCSQVDFATKPVEVIDEVNIWADVHTNGLIKQILSRDCTDTIKEIRNST 166
Query: 185 VLIINTLYFKGSWRHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILR 364
+++ N +YFK +W +F +TK F++ + V FM Y F +LR
Sbjct: 167 LILANAVYFKAAWSRKFDAKLTKDNDFHLLDGNTVKVPFMMSYKDQYLRGYDGFQ--VLR 224
Query: 365 MPYRSNK--YAMYIIVPNSLTGLPRVLNSLSDLRVEMNN---LRERLVD-VRLPKFTFEY 526
+PY +K ++MYI +PN GL +L +S +++ L VD +R+PK F +
Sbjct: 225 LPYVEDKRHFSMYIYLPNDKDGLAALLEKISTEPGFLDSHIPLHRTPVDALRIPKLNFSF 284
Query: 527 PSRLNGVL 550
+ + VL
Sbjct: 285 EFKASEVL 292
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 70.5 bits (165), Expect = 7e-13
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Frame = +2
Query: 47 FYKTELKSVDFLN-TEVAANEINSWVSNTTQGKIPKLVDADDMIGMVVLII-NTLYFKGS 220
F+K VDF + E ++N+W S T I +++ + + I N LYFKG+
Sbjct: 146 FFKASFAKVDFRHKAEEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWIYGNALYFKGA 205
Query: 221 WRHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRMPYR------SN 382
W F +MT+ PF++ SV FM + + F +LR+PYR +
Sbjct: 206 WEKAFDKSMTRDKPFHLLNGKSVSVPFMRSYEKQFIEAYDGF--KVLRLPYRQGRDDTNR 263
Query: 383 KYAMYIIVPNSLTGLPRVLNSLSD----LRVEMNNLRERLVDVRLPKFTFEY 526
+++MY+ +P+ L +L ++ L + R + D R+PKF E+
Sbjct: 264 EFSMYLYLPDKKGELDNLLERITSNPGFLDSHIPEYRVDVGDFRIPKFKIEF 315
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 67.7 bits (158), Expect = 5e-12
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 14/188 (7%)
Frame = +2
Query: 5 SVEPRQRFAAIAQEFYKTELKSVDFLNTEVAAN-EINSWVSNTTQGKIPKLVDADDMIGM 181
+VEP F + YK VDF N E+NSWV T G I L+ ++
Sbjct: 105 NVEPS--FKDLLLNSYKAAFNRVDFRTKADEVNREVNSWVEKQTNGLITNLLPSNPKSAP 162
Query: 182 VV--LIINTLYFKGSWRHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAX 355
+ + N L+F G W QF P++TK F++ + V FM Y F
Sbjct: 163 LTDHIFANALFFNGRWDSQFDPSLTKDSDFHLLDGTKVRVPFMTGASCRYTHVYEGF--K 220
Query: 356 ILRMPYR-----SNKYAMYIIVPNSLTGLPRVLNSLSDLR--VEMNNLRER----LVDVR 502
++ + YR S ++M I +P+ GLP +L L+ R ++ N + + +++
Sbjct: 221 VINLQYRRGREDSRSFSMQIYLPDEKDGLPSMLERLASTRGFLKDNEVLPSHSAVIKELK 280
Query: 503 LPKFTFEY 526
+P+F F++
Sbjct: 281 IPRFKFDF 288
>At1g51330.1 68414.m05772 serpin-related / serine protease
inhibitor-related similar to serpin [Hordeum vulgare
subsp. vulgare] CAA64599.1 GI:1197577
Length = 193
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 104 EINSWVSNTTQGKIPKLVDADDMIGMVVLII-NTLYFKGSWRHQFPPNMTKPGPFYVSPK 280
E+NSW T G I L+ + + I N LYFKG+W ++F +MT PF++
Sbjct: 38 EVNSWALRHTNGLIKNLLPPGSVTNQTIKIYGNALYFKGAWENKFGKSMTIHKPFHLVNG 97
Query: 281 SPKSVEFMNVIDHFYYTESSNF 346
V FM + Y + F
Sbjct: 98 KQVLVPFMKSYERKYMKAYNGF 119
>At1g63280.1 68414.m07154 serpin-related / serine protease
inhibitor-related similar to protein zx [Hordeum vulgare
subsp. vulgare] GI:19071, serpin [Triticum aestivum]
GI:1885346
Length = 120
Score = 47.2 bits (107), Expect = 7e-06
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Frame = +2
Query: 104 EINSWVSNTTQGKIPKLVDADDMIGMVVLII-NTLYFKGSWRHQFPPNMTKPGPFYVSPK 280
E+N W S+ T G I L+ + V + N LYFKG+W ++F + TK F+ +
Sbjct: 15 ELNKWASDHTNGLIIDLLPRGSVKSETVQVYGNALYFKGAWENKFDKSSTKDNEFHQGKE 74
Query: 281 SPKSVEFMNVIDHFYYTESSNFDAXILRMPYR------SNKYAMYIIVPN 412
V FM + Y F +L +PY+ K+++Y +P+
Sbjct: 75 --VHVPFMRSYESQYIMACDGF--KVLGLPYQQGLDDTKRKFSIYFYLPD 120
>At2g31990.1 68415.m03908 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 479
Score = 32.3 bits (70), Expect = 0.22
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +2
Query: 323 YYTESSNFDAXILRMPYRSNKYAMYIIVPNSLTG----LPRVLNSLSDLRVEMNNLRERL 490
++ + S + + +P S+KY++YI V TG + +L + + RV +RE +
Sbjct: 374 FFNQGSAYKQYLWHIPKNSSKYSVYITVKELRTGGKNKIEEILRGIPNERVV--GMRENV 431
Query: 491 VDVRLPKFTFEYPSR 535
+ + +PK + P+R
Sbjct: 432 IRL-IPKIVYAKPNR 445
>At1g21740.1 68414.m02721 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 953
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 197 NTLYFKGSWRHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFYYTES 337
NT YF + + PP+ +P P SP S +F+NV D + Y +
Sbjct: 259 NTGYFGYPEQRREPPSPVRPTPAPPSPPRISSWDFLNVFDTYDYNRA 305
>At5g10290.1 68418.m01194 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 613
Score = 30.7 bits (66), Expect = 0.68
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 404 VPNSLTGLPRVLNSLSDLRVEMNNLRERLVDVRLPKFTF 520
+P SLTGLP +LN L D + + L ++ PK+ F
Sbjct: 158 IPESLTGLPNLLNLLLDSNSLSGQIPQSLFEI--PKYNF 194
>At5g13970.1 68418.m01633 expressed protein
Length = 404
Score = 29.9 bits (64), Expect = 1.2
Identities = 29/129 (22%), Positives = 53/129 (41%)
Frame = +2
Query: 11 EPRQRFAAIAQEFYKTELKSVDFLNTEVAANEINSWVSNTTQGKIPKLVDADDMIGMVVL 190
+PR A A+ K + ++V+ LN+ + E+ +S +T+ + P +V D+++G
Sbjct: 152 DPRANLIA-AKLRLKEDAEAVNKLNSLHVSEELQDNLSMSTENEKPFVVSEDNLLGA--- 207
Query: 191 IINTLYFKGSWRHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRMP 370
+ S + P + + KSPK V F + + TE N P
Sbjct: 208 -FKESHVGSSDENGLKPILKRRENQADDSKSPKRVRFSSDVKDRTLTEGDNDSVMEASSP 266
Query: 371 YRSNKYAMY 397
A+Y
Sbjct: 267 NEDKVEAVY 275
>At2g15320.1 68415.m01747 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611
Length = 382
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 335 SSNFDAXILRMPYRSNKYAMYIIVPNSLTG-LPRVLNSLSDLR 460
S++F + R N I NSLTG LP+ +NSLS+LR
Sbjct: 133 SNSFSGSLPDSVTRLNSLESIDISHNSLTGPLPKTMNSLSNLR 175
>At3g48700.1 68416.m05318 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 329
Score = 27.9 bits (59), Expect = 4.8
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 208 FQRKLASPVPTEYDKTWTILR 270
++R P+PT YD +WT L+
Sbjct: 115 YRRAPEHPIPTSYDDSWTALK 135
>At2g34500.1 68415.m04237 cytochrome P450 family protein similar to
Cytochrome P450 61 (C-22 sterol desaturase) (SP:P54781)
{Saccharomyces cerevisiae}
Length = 495
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 254 PGPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAXILRMPYRSNKYAMYI 400
PGPF+V P +V + F+ +SS + L Y K+ +YI
Sbjct: 38 PGPFFVPPIIGNAVALVRDPTSFWDKQSSTANISGLSANYLIGKFIVYI 86
>At4g37920.1 68417.m05362 expressed protein
Length = 673
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 50 YKTELKSVDFLNTEVAANE--INSWVSNTTQGKIPKLVDADDMIGMVVLIINTLY 208
Y L+SV+ L+T A E +NS ++ KI L A ++ ++L+IN+ Y
Sbjct: 467 YDNTLESVETLDTAQAKFEDILNSPSVDSACEKIRSLAKAKELDSSLILLINSAY 521
>At2g46470.1 68415.m05783 OXA1 protein, putative similar to Oxa1
protein [Arabidopsis thaliana] GI:10176922
Length = 431
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 50 YKTELKSVDFLNTEVAANEINSWVSNTTQGKIPKL 154
+ ++ +DF+ TEV +EI V+ T+Q +P +
Sbjct: 89 WSDKVDGIDFVATEVVPDEIIEAVTTTSQAVVPAI 123
>At5g65240.1 68418.m08207 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 617
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 404 VPNSLTGLPRVLNSLSDLRVEMNNLRERLVDVRLPKFTF 520
+P+SLTGL +++N L D + + L ++PK+ F
Sbjct: 152 IPDSLTGLSKLINILLDSNNLSGEIPQSL--FKIPKYNF 188
>At4g01290.1 68417.m00170 expressed protein
Length = 991
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 227 HQFPPNMTKPGPFYVSPKS 283
H+FPPNM PF+ +P S
Sbjct: 843 HRFPPNMIHRPPFHHTPTS 861
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,988,862
Number of Sequences: 28952
Number of extensions: 250601
Number of successful extensions: 674
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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