Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_G01
         (512 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    28   0.042
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    26   0.17 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       25   0.52 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.69 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   2.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   2.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   2.8  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   6.4  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   8.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.5  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.5  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 28.3 bits (60), Expect = 0.042
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 280 SSLRCPGTVYSP----WRLRCHSSPSPTGTSLSRSTELNSTRQLFHTVNNLF*FTY 435
           S+++ P TV SP    W L   SSP P     ++ T   S  Q++  V NL   TY
Sbjct: 308 STVQTPTTVMSPTINCWSLT--SSPPPPYQISAQPTPSQSPNQIYQPVTNLTNLTY 361


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 298 GTVYSPWRLRCHSSPSPTGTSLSRSTELNST 390
           G  + PW+     +PSP+ T  S  T+  ST
Sbjct: 61  GKGFHPWKKSPQGAPSPSSTPSSLPTQRTST 91


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 24.6 bits (51), Expect = 0.52
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +3

Query: 123 DVSQYTPEEIVVKTVDYKLLVHAKHEEKSDTKSVYREYNREFLLP 257
           DV    PE +V+K VDY    H        TK VY    RE+  P
Sbjct: 119 DVCLAIPESLVIKLVDYH---HQLLGHFGATK-VYNSMKREYYWP 159


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 0.69
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 178  YWSTPNTRRNLTQNLCTESTT 240
            +W+T  TRR  T    T STT
Sbjct: 1051 WWTTTTTRRTTTTRPTTTSTT 1071


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 337 SPSPTGTSLSRSTELNST 390
           SPS T T+ + S+ LNST
Sbjct: 7   SPSTTTTTTTTSSALNST 24


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 337 SPSPTGTSLSRSTELNST 390
           SPS T T+ + S+ LNST
Sbjct: 7   SPSTTTTTTTTSSALNST 24


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 237 NREFLLPKGTNPEAIKSSLSRDGVLT 314
           N + L PKG N   I+  +  +GVL+
Sbjct: 833 NNKRLEPKGDNRYTIREEILANGVLS 858


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 244 SLLYSLYTDFVSDFSSCLAWT 182
           ++LY L  D V++F+    W+
Sbjct: 157 AVLYRLLADNVANFNKIFGWS 177


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 199 RRNLTQNLCTESTTGNSC 252
           RR++T+N   +   GN+C
Sbjct: 213 RRSITKNAVYQCKYGNNC 230


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 176 FVIYSLNDDFLGSVLADV 123
           +VIY L DD L SV A +
Sbjct: 58  WVIYWLQDDALKSVYASL 75


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +2

Query: 404 ILLIIYFNLRIINY 445
           I++I+Y +L ++NY
Sbjct: 217 IMIILYSSLMVLNY 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,721
Number of Sequences: 336
Number of extensions: 2982
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)