Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_F22
(504 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81120-2|CAB03344.2| 426|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 3.3
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 3.3
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 3.3
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 3.3
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 28 3.3
AF036702-7|AAB88372.1| 360|Caenorhabditis elegans Hypothetical ... 28 3.3
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 27 7.7
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 27 7.7
U80450-4|AAB37829.1| 926|Caenorhabditis elegans Hypothetical pr... 27 7.7
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 27 7.7
AF016685-10|AAG24143.2| 195|Caenorhabditis elegans Hypothetical... 27 7.7
>Z81120-2|CAB03344.2| 426|Caenorhabditis elegans Hypothetical
protein T12D8.4 protein.
Length = 426
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/77 (23%), Positives = 35/77 (45%)
Frame = +1
Query: 148 ADVQTVPAPYTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPD 327
A + VP YT+ ++ S G + + K ++ + +R+ +VG ++ D
Sbjct: 98 AGIHQVPFSYTLPKSLPSSFEGEFGHIRYTCKAICERPWDFDIVSRKAFTVVGIEDINSD 157
Query: 328 DTFSQXLNCGEPNNAVT 378
++ C E N+AVT
Sbjct: 158 PKLNEPATCVESNHAVT 174
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 1928 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 1978
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 2457 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2507
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 2138 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2188
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 1928 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 1978
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 2457 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2507
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 2138 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2188
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 1347 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 1397
>AF036702-7|AAB88372.1| 360|Caenorhabditis elegans Hypothetical
protein F33D4.4 protein.
Length = 360
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 102 GGVSAGKRHHRCNCYYVSEHHLFYKFQ 22
GG+ G H C ++VSEH++F K Q
Sbjct: 215 GGLVLGMGLHPCAGHFVSEHYVFKKDQ 241
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -1
Query: 270 DAGHFVFGCFAADNHVNGMTSFYRADSCSDG-VRRWYCLNISS 145
D VF C A+++++NG+ S R + +D +R+ C+++ S
Sbjct: 4000 DCDKSVFACHASNSYINGVASKLRNTNSADAKLRKDDCVSLIS 4042
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -1
Query: 255 VFGCFAADNHVNGMTSFYRADSCSDG-VRRWYCLNISS 145
VF C A+++++NG+ S R + +D +R+ C+++ S
Sbjct: 3997 VFACHASNSYINGVASKLRNTNSADAKLRKDDCVSLIS 4034
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -1
Query: 255 VFGCFAADNHVNGMTSFYRADSCSDG-VRRWYCLNISS 145
VF C A+++++NG+ S R + +D +R+ C+++ S
Sbjct: 4008 VFACHASNSYINGVASKLRNTNSADAKLRKDDCVSLIS 4045
>U80450-4|AAB37829.1| 926|Caenorhabditis elegans Hypothetical
protein M01E11.3 protein.
Length = 926
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 292 DKIVGTWTVSPDDTFSQXLNCGEPNNAVTHKMHAKELDRQTVSYPWTAPKDLEGDVVFNV 471
+K + WT + ++F + +N+ KM KEL Q + P K + GD N
Sbjct: 394 NKTIEDWTFNSTNSFDKSKKVMSIDNSKDQKMKIKELPGQLIR-PTPIEKPIIGDPRMNS 452
Query: 472 TIVKSYAVF 498
K +V+
Sbjct: 453 EKRKDVSVW 461
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -1
Query: 255 VFGCFAADNHVNGMTSFYRADSCSDG-VRRWYCLNISS 145
VF C A+++++NG+ S R + +D +R+ C+++ S
Sbjct: 4008 VFACHASNSYINGVASKLRNTNSADAKLRKDDCVSLIS 4045
>AF016685-10|AAG24143.2| 195|Caenorhabditis elegans Hypothetical
protein F59E11.7a protein.
Length = 195
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 12 DDLPEIYRKDDVHLRSSSCIG 74
DD+ Y K+ +LRSS CIG
Sbjct: 170 DDMTRRYEKEAANLRSSICIG 190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,470,594
Number of Sequences: 27780
Number of extensions: 276892
Number of successful extensions: 668
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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