Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_F21
(388 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0122 - 41196081-41196205,41197561-41198245,41198961-411993... 29 0.97
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 29 1.3
12_02_0109 + 13701488-13701787,13701928-13701981,13702065-13702133 29 1.7
03_06_0047 + 31266940-31268394 29 1.7
08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,452... 27 5.2
06_01_0349 + 2529279-2530446,2532232-2533036,2533066-2533106,253... 27 6.9
04_01_0514 + 6738706-6739230 27 6.9
10_07_0029 + 12031711-12032464,12044289-12044386 26 9.1
10_05_0050 + 8565612-8566523 26 9.1
07_01_0469 - 3552409-3553368 26 9.1
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 26 9.1
>01_07_0122 -
41196081-41196205,41197561-41198245,41198961-41199329,
41199405-41199514,41200539-41200833
Length = 527
Score = 29.5 bits (63), Expect = 0.97
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -1
Query: 358 TVENTPVNIY*GKVFPSVPQTGAYMKVQTQGSASSHVPSFTIFKSLCVLSLSQYKRHWL 182
T+ T + + G PSVP+ + T S+ + + T+F + +SLS Y RH L
Sbjct: 276 TIVETSIFLEVGNHQPSVPRMKQLAQTITNSSSGNLGLNHTVFGRVKQISLSSYLRHSL 334
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 29.1 bits (62), Expect = 1.3
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 62 YTRYISDRRCAN--IRRNSAAVVMRVRKKLKTGLRIRRQDLPQPVPLVLREGQDAQRF 229
Y ++S R AN ++N A+ RV+ +R + DLP L++REG + RF
Sbjct: 508 YKNFVSQRSDANGWYQKNGVAL-FRVQGLKHDCIRAIQVDLPLKQSLLVREGSEPDRF 564
>12_02_0109 + 13701488-13701787,13701928-13701981,13702065-13702133
Length = 140
Score = 28.7 bits (61), Expect = 1.7
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 215 DAQRFENRERGYV*GSRSLRLYLHICPGLWHRREHF 322
D + +E+ ++G+V G+R++ YL + P + HF
Sbjct: 49 DVRMWEDFDKGHVAGARNVPYYLSVTPRAKEKNPHF 84
>03_06_0047 + 31266940-31268394
Length = 484
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +3
Query: 138 RNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTF 284
R + C D TY ++CE DK LK+ K ++ P + TF
Sbjct: 368 RRMIKCCQPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFLPSMHTF 416
>08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,
4521632-4521723,4522226-4522342,4522641-4522704,
4523175-4523228,4523579-4523666,4523788-4524023,
4525258-4525478,4525634-4525827,4525938-4525995,
4526771-4526824,4526851-4527473,4527580-4527640,
4528417-4528590,4528803-4529063,4529201-4529320,
4529388-4530022,4530062-4530828,4530915-4531012,
4531101-4531155,4531230-4531318
Length = 2010
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 310 SVPQTGAYMKVQTQGSASSHVPS 242
S Q G+ M+ Q+QG ASS +PS
Sbjct: 1668 STVQNGSQMQQQSQGPASSAIPS 1690
>06_01_0349 +
2529279-2530446,2532232-2533036,2533066-2533106,
2533219-2533424
Length = 739
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 130 AHDDGSXXXXXXXXXAIRNIPSI-FILCYCLWHKIPSFSL 14
+HDDG A +P + I C+ LW+ P F L
Sbjct: 488 SHDDGGFSLMNLFSKATLQLPKLDTIWCHHLWYAAPKFPL 527
>04_01_0514 + 6738706-6739230
Length = 174
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 147 RPVCGSDGKTYHNQCLLYCERDKTHSDL 230
RP G + T+ + C + D+ HSDL
Sbjct: 117 RPTAGENDTTFSHMCAVMKGMDRMHSDL 144
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 141 NLRPVCGSDGKTYHNQCLLYCERDKTHSDL 230
+ RP G + T+ + C + D+ HSDL
Sbjct: 115 SFRPTAGENDTTFGHMCAVMRGLDRMHSDL 144
>10_05_0050 + 8565612-8566523
Length = 303
Score = 26.2 bits (55), Expect = 9.1
Identities = 15/67 (22%), Positives = 26/67 (38%)
Frame = +3
Query: 54 KMNILGIFLIXXXXXXXXXXLPSSCACARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLK 233
+MN G++ I ++ +LR G+ TY+ C+ YC + D +
Sbjct: 117 EMNRGGVYRISNTHNMLVVLGCNTVGYTESLRSEGGAYSSTYYIGCMSYCNNSASAQDGQ 176
Query: 234 IVKEGTC 254
G C
Sbjct: 177 CAGVGCC 183
>07_01_0469 - 3552409-3553368
Length = 319
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 147 RPVCGSDGKTYHNQCLLYCERDKTHSDL 230
RP G + T+ + C++ D+ HSDL
Sbjct: 117 RPTAGENFTTFGHMCVVMRGMDRMHSDL 144
>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 126 CACARNL-RPVCGSDGKTYHNQCLLYC 203
C C + L P+C G T+ +C+L C
Sbjct: 1186 CLCLKPLIHPLCCPKGHTFCKECILEC 1212
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,306,618
Number of Sequences: 37544
Number of extensions: 205711
Number of successful extensions: 583
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 648814968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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