Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_F20
         (539 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.98 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.0  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   5.2  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   6.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 0.98
 Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
 Frame = +2

Query: 335  EKRKLTIPSSLGYGNRGAGNVIPPHATLHFEVELINIGDSPPTTNVFKEID--ADQNNML 508
            EK+    PS+  +      +  PP  T H++ +      + PTT V + ID   D     
Sbjct: 1154 EKKPGHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTTSTTTRPTTTVSQLIDDKCDSGQYY 1213

Query: 509  SREEVSEY 532
              E  S +
Sbjct: 1214 PHESCSSF 1221


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 14/55 (25%), Positives = 23/55 (41%)
 Frame = -2

Query: 238 VELMTIAQSTRVVHGQHITIFRLRSTSFGHAQDINLKFGNLRICDRSSNKGQHHK 74
           V L+   QS  + H  H+  +       G + D N+K  NL+       +G  H+
Sbjct: 582 VVLVDEVQSPNLSHPFHLHGYAFNVVGIGRSPDQNVKKINLKHALDLDRRGLLHR 636


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 161 CTTKSKDGDMLTMHY 205
           CT K K+G    +HY
Sbjct: 78  CTEKQKEGSRKIIHY 92


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -3

Query: 156 SGTLKTSILSSVTSESAIVAPTRANITKTQRNI 58
           S  +KT+     TSE   +   + N  KTQ N+
Sbjct: 162 SERMKTTRALEKTSEELKIPKAKINTGKTQYNL 194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,723
Number of Sequences: 336
Number of extensions: 2273
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)