Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_F20
         (539 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...   103   3e-24
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   1.2  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   8.7  

>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score =  103 bits (248), Expect = 3e-24
 Identities = 47/94 (50%), Positives = 61/94 (64%)
 Frame = +2

Query: 164 TTKSKDGDMLTMHYTGTLSDGHKFDSSFDRDQPFTFQLGVGQVIKGWDQGLRDMCVGEKR 343
           TT  K G    +HYTGTL DG  FDSS  R +PF F +G G+VI+GWD+G+  M VG++ 
Sbjct: 14  TTFPKPGQTAVVHYTGTLDDGTVFDSSRTRGKPFKFSVGKGEVIRGWDEGVAQMSVGQRA 73

Query: 344 KLTIPSSLGYGNRGAGNVIPPHATLHFEVELINI 445
           KL       YG+RG   VIPP+A L F+VEL+ +
Sbjct: 74  KLVCSPDYAYGSRGHPGVIPPNARLTFDVELLRV 107


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 406  RWDHIAGSAIAVAQGRRDGQFTF 338
            RW H     I+  QGRR G+ TF
Sbjct: 959  RWTHRIIRDISAWQGRRHGEMTF 981


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 12/52 (23%), Positives = 22/52 (42%)
 Frame = +2

Query: 212 TLSDGHKFDSSFDRDQPFTFQLGVGQVIKGWDQGLRDMCVGEKRKLTIPSSL 367
           ++S GH +  SF         +   +++  WD G+ +      +  TI S L
Sbjct: 221 SVSMGHAYRISFIESSATVQNILTHKIVCSWDYGIANGKAARLKHATILSEL 272


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,082
Number of Sequences: 2352
Number of extensions: 10873
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)