Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_F19
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   1.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.1  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 341 TSDLAPRTHLLKYPGLKHYAP 279
           +S  +PRT  +K PG K  AP
Sbjct: 204 SSGRSPRTRRVKKPGAKQGAP 224


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +2

Query: 191 LVGFPRFAQATMSTAMWSLFFIVQIL 268
           L+  P      M    WS FFIV +L
Sbjct: 259 LISNPIMWDRVMLLTFWSAFFIVNVL 284


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +2

Query: 425  PDYWDLDVFEPTIADYDXFDLTLTKRISSYSDKNFLLS 538
            P  W +D  +   +D + F   + +  +++  KN LLS
Sbjct: 2445 PKCWQVDCNKGPDSDKEAFAAFVRELSAAFKPKNLLLS 2482



 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +2

Query: 425  PDYWDLDVFEPTIADYDXFDLTLTKRISSYSDKNFLLS 538
            P  W +D  +   +D   F   +T+   ++  K +LLS
Sbjct: 1522 PKCWQVDCKKGPDSDKQAFAAWVTELKQAFKPKGYLLS 1559


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,631
Number of Sequences: 336
Number of extensions: 2413
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)