Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_F18
(661 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050588-1|AAH50588.1| 957|Homo sapiens melanoma antigen family... 32 2.1
AL096827-1|CAI42970.1| 957|Homo sapiens melanoma antigen family... 32 2.1
AF490507-1|AAM08354.1| 957|Homo sapiens hepatocellular carcinom... 32 2.1
AB046807-1|BAB13413.1| 991|Homo sapiens KIAA1587 protein protein. 32 2.1
L46721-1|AAC41774.1| 164|Homo sapiens mucin protein. 31 3.6
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 31 3.6
M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein. 31 4.8
AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein. 31 4.8
AB209992-1|BAE06074.1| 2319|Homo sapiens DSP variant protein pro... 31 4.8
BC029041-1|AAH29041.1| 668|Homo sapiens ZBTB20 protein protein. 30 6.4
AF139460-1|AAG28340.2| 741|Homo sapiens BTB/POZ zinc finger pro... 30 6.4
>BC050588-1|AAH50588.1| 957|Homo sapiens melanoma antigen family E,
1 protein.
Length = 957
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +1
Query: 316 SIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVN 495
S+ P++ P+T+ PT ++VP T G PD+ S PT G
Sbjct: 187 SVVPTPDEGPSTSVLPTPGEGPGTSVPLAATEGLSTSVQATPDEGPSTSVPPTATEGLST 246
Query: 496 PV 501
PV
Sbjct: 247 PV 248
Score = 30.7 bits (66), Expect = 4.8
Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 6/110 (5%)
Frame = +1
Query: 304 EEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDD--INSVFKIPTQ 477
E S+ ++ P+T+ PT ++VP G PD+ SV P +
Sbjct: 147 EPSTSVPPTASEVPSTSLPPTPGEGTSTSVPPTAYEGPSTSVVPTPDEGPSTSVLPTPGE 206
Query: 478 APGTVNPVXXX--XXXXXXXXXESAPSAIVPTVNTN--DTPCITKTGQEG 615
PGT P+ + PS VP T TP + T EG
Sbjct: 207 GPGTSVPLAATEGLSTSVQATPDEGPSTSVPPTATEGLSTP-VPPTRDEG 255
>AL096827-1|CAI42970.1| 957|Homo sapiens melanoma antigen family E,
1 protein.
Length = 957
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +1
Query: 316 SIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVN 495
S+ P++ P+T+ PT ++VP T G PD+ S PT G
Sbjct: 187 SVVPTPDEGPSTSVLPTPGEGPGTSVPLAATEGLSTSVQATPDEGPSTSVPPTATEGLST 246
Query: 496 PV 501
PV
Sbjct: 247 PV 248
Score = 30.7 bits (66), Expect = 4.8
Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 6/110 (5%)
Frame = +1
Query: 304 EEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDD--INSVFKIPTQ 477
E S+ ++ P+T+ PT ++VP G PD+ SV P +
Sbjct: 147 EPSTSVPPTASEVPSTSLPPTPGEGTSTSVPPTAYEGPSTSVVPTPDEGPSTSVLPTPGE 206
Query: 478 APGTVNPVXXX--XXXXXXXXXESAPSAIVPTVNTN--DTPCITKTGQEG 615
PGT P+ + PS VP T TP + T EG
Sbjct: 207 GPGTSVPLAATEGLSTSVQATPDEGPSTSVPPTATEGLSTP-VPPTRDEG 255
>AF490507-1|AAM08354.1| 957|Homo sapiens hepatocellular
carcinoma-associated protein HCA1 protein.
Length = 957
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +1
Query: 316 SIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVN 495
S+ P++ P+T+ PT ++VP T G PD+ S PT G
Sbjct: 187 SVVPTPDEGPSTSVLPTPGEGPGTSVPLAATEGLSTSVQATPDEGPSTSVPPTATEGLST 246
Query: 496 PV 501
PV
Sbjct: 247 PV 248
Score = 30.7 bits (66), Expect = 4.8
Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 6/110 (5%)
Frame = +1
Query: 304 EEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDD--INSVFKIPTQ 477
E S+ ++ P+T+ PT ++VP G PD+ SV P +
Sbjct: 147 EPSTSVPPTASEVPSTSLPPTPGEGTSTSVPPTAYEGPSTSVVPTPDEGPSTSVLPTPGE 206
Query: 478 APGTVNPVXXX--XXXXXXXXXESAPSAIVPTVNTN--DTPCITKTGQEG 615
PGT P+ + PS VP T TP + T EG
Sbjct: 207 GPGTSVPLAATEGLSTSVQATPDEGPSTSVPPTATEGLSTP-VPPTRDEG 255
>AB046807-1|BAB13413.1| 991|Homo sapiens KIAA1587 protein protein.
Length = 991
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +1
Query: 316 SIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVN 495
S+ P++ P+T+ PT ++VP T G PD+ S PT G
Sbjct: 221 SVVPTPDEGPSTSVLPTPGEGPGTSVPLAATEGLSTSVQATPDEGPSTSVPPTATEGLST 280
Query: 496 PV 501
PV
Sbjct: 281 PV 282
Score = 30.7 bits (66), Expect = 4.8
Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 6/110 (5%)
Frame = +1
Query: 304 EEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDD--INSVFKIPTQ 477
E S+ ++ P+T+ PT ++VP G PD+ SV P +
Sbjct: 181 EPSTSVPPTASEVPSTSLPPTPGEGTSTSVPPTAYEGPSTSVVPTPDEGPSTSVLPTPGE 240
Query: 478 APGTVNPVXXX--XXXXXXXXXESAPSAIVPTVNTN--DTPCITKTGQEG 615
PGT P+ + PS VP T TP + T EG
Sbjct: 241 GPGTSVPLAATEGLSTSVQATPDEGPSTSVPPTATEGLSTP-VPPTRDEG 289
>L46721-1|AAC41774.1| 164|Homo sapiens mucin protein.
Length = 164
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 3/94 (3%)
Frame = +1
Query: 331 PNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVXXX 510
P+ PTT+ +T S SA T T+G T P + + T +
Sbjct: 7 PSPVPTTSSISVLTTSTTSASTTSTTSGP----GTTPSPVPTTSTTSAPTTSTTSAPTTS 62
Query: 511 XXXXXXXXXESAP---SAIVPTVNTNDTPCITKT 603
SAP + + PT +T P + T
Sbjct: 63 TTSAPTTSTPSAPTTSTTLAPTTSTTSAPTTSTT 96
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 31.1 bits (67), Expect = 3.6
Identities = 25/98 (25%), Positives = 32/98 (32%), Gaps = 3/98 (3%)
Frame = +1
Query: 331 PNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVXXX 510
P+ PTT+ T S SA PT +T G T P + S T +
Sbjct: 1201 PSPVPTTSTTSASTTSTTSA-PTTSTTSGPG---TTPSPVPSTSITSAATTSTTSAPTTR 1256
Query: 511 XXXXXXXXXESAPSAI---VPTVNTNDTPCITKTGQEG 615
S P VPT +T P + T G
Sbjct: 1257 TTSAPTSSMTSGPGTTPSPVPTTSTTSAPTTSTTSGPG 1294
>M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein.
Length = 2871
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = -1
Query: 481 ELASVF*KHCLYHRGLYHSVLDYRWYL 401
+LASV +H HRG+++S+ DYRW L
Sbjct: 210 DLASVE-QHINSHRGIHNSIGDYRWQL 235
>AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein.
Length = 2871
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = -1
Query: 481 ELASVF*KHCLYHRGLYHSVLDYRWYL 401
+LASV +H HRG+++S+ DYRW L
Sbjct: 210 DLASVE-QHINSHRGIHNSIGDYRWQL 235
>AB209992-1|BAE06074.1| 2319|Homo sapiens DSP variant protein
protein.
Length = 2319
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = -1
Query: 481 ELASVF*KHCLYHRGLYHSVLDYRWYL 401
+LASV +H HRG+++S+ DYRW L
Sbjct: 257 DLASVE-QHINSHRGIHNSIGDYRWQL 282
>BC029041-1|AAH29041.1| 668|Homo sapiens ZBTB20 protein protein.
Length = 668
Score = 30.3 bits (65), Expect = 6.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 208 ESTHCRKMYRILAILVLVGSAHAQANAND 294
E+THCRK R + I LVG+ H + D
Sbjct: 234 ETTHCRKQPRPVRIQTLVGNIHIKQEMED 262
>AF139460-1|AAG28340.2| 741|Homo sapiens BTB/POZ zinc finger
protein DPZF protein.
Length = 741
Score = 30.3 bits (65), Expect = 6.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 208 ESTHCRKMYRILAILVLVGSAHAQANAND 294
E+THCRK R + I LVG+ H + D
Sbjct: 307 ETTHCRKQPRPVRIQTLVGNIHIKQEMED 335
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,708,198
Number of Sequences: 237096
Number of extensions: 2053570
Number of successful extensions: 5589
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5481
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -