Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_F17
(528 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-3|AAX88810.1| 514|Caenorhabditis elegans Lysyl (k) trna ... 153 6e-38
U41105-2|AAK68395.1| 596|Caenorhabditis elegans Lysyl (k) trna ... 153 6e-38
U41105-1|AAA82396.1| 572|Caenorhabditis elegans Lysyl (k) trna ... 153 6e-38
Z81497-3|CAB04081.2| 593|Caenorhabditis elegans Hypothetical pr... 35 0.031
AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical ... 31 0.67
AL021474-6|CAI79259.1| 261|Caenorhabditis elegans Hypothetical ... 29 1.6
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p... 27 8.3
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p... 27 8.3
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p... 27 8.3
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr... 27 8.3
U56961-5|AAK39298.2| 156|Caenorhabditis elegans Hypothetical pr... 27 8.3
U39851-7|AAM81115.1| 668|Caenorhabditis elegans Proteasome regu... 27 8.3
U39851-6|AAM81116.1| 965|Caenorhabditis elegans Proteasome regu... 27 8.3
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase... 27 8.3
AF039041-8|AAB94189.2| 448|Caenorhabditis elegans Hypothetical ... 27 8.3
AF016444-1|AAN73876.2| 330|Caenorhabditis elegans Serpentine re... 27 8.3
>U41105-3|AAX88810.1| 514|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform c protein.
Length = 514
Score = 153 bits (372), Expect = 6e-38
Identities = 71/122 (58%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Frame = +1
Query: 166 MVKSIHGTYKVKYRPDGPSGEEV-EIDFTPPFARVPMIASLEKILNVKLPSPDTLDTAES 342
MV SI GTYK++Y P+GP+ E V E+DFTPPF RV M L + L LP P TL T E+
Sbjct: 282 MVMSIKGTYKIEYHPNGPNTEPVYEVDFTPPFKRVHMYDGLAEKLGATLPDPSTLHTEEA 341
Query: 343 NALLSQLCEKHEVECPPPRTTARLLDKLVGEFLEDKCINPTFILDHPQIMSPLSKYHRDI 522
+ +LC + V+C PRTTARLLDKLVGE+LE I+PTF++ HPQIMSPL+K+HR I
Sbjct: 342 REVFDKLCRDNNVDCSAPRTTARLLDKLVGEYLESTFISPTFLIGHPQIMSPLAKWHRSI 401
Query: 523 PG 528
PG
Sbjct: 402 PG 403
Score = 81.0 bits (191), Expect = 5e-16
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = +2
Query: 2 LVVGGLDRVMKSEDSSRNEGIDLTHNPEFTTCEFYMAYADYNDLITIT 145
LVVGG+DRV + RNEGIDLTHNPEFTTCEFYMAYADY D+I +T
Sbjct: 228 LVVGGIDRVYEVGRLFRNEGIDLTHNPEFTTCEFYMAYADYEDVIQLT 275
>U41105-2|AAK68395.1| 596|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform b protein.
Length = 596
Score = 153 bits (372), Expect = 6e-38
Identities = 71/122 (58%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Frame = +1
Query: 166 MVKSIHGTYKVKYRPDGPSGEEV-EIDFTPPFARVPMIASLEKILNVKLPSPDTLDTAES 342
MV SI GTYK++Y P+GP+ E V E+DFTPPF RV M L + L LP P TL T E+
Sbjct: 364 MVMSIKGTYKIEYHPNGPNTEPVYEVDFTPPFKRVHMYDGLAEKLGATLPDPSTLHTEEA 423
Query: 343 NALLSQLCEKHEVECPPPRTTARLLDKLVGEFLEDKCINPTFILDHPQIMSPLSKYHRDI 522
+ +LC + V+C PRTTARLLDKLVGE+LE I+PTF++ HPQIMSPL+K+HR I
Sbjct: 424 REVFDKLCRDNNVDCSAPRTTARLLDKLVGEYLESTFISPTFLIGHPQIMSPLAKWHRSI 483
Query: 523 PG 528
PG
Sbjct: 484 PG 485
Score = 81.0 bits (191), Expect = 5e-16
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = +2
Query: 2 LVVGGLDRVMKSEDSSRNEGIDLTHNPEFTTCEFYMAYADYNDLITIT 145
LVVGG+DRV + RNEGIDLTHNPEFTTCEFYMAYADY D+I +T
Sbjct: 310 LVVGGIDRVYEVGRLFRNEGIDLTHNPEFTTCEFYMAYADYEDVIQLT 357
>U41105-1|AAA82396.1| 572|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform a protein.
Length = 572
Score = 153 bits (372), Expect = 6e-38
Identities = 71/122 (58%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Frame = +1
Query: 166 MVKSIHGTYKVKYRPDGPSGEEV-EIDFTPPFARVPMIASLEKILNVKLPSPDTLDTAES 342
MV SI GTYK++Y P+GP+ E V E+DFTPPF RV M L + L LP P TL T E+
Sbjct: 340 MVMSIKGTYKIEYHPNGPNTEPVYEVDFTPPFKRVHMYDGLAEKLGATLPDPSTLHTEEA 399
Query: 343 NALLSQLCEKHEVECPPPRTTARLLDKLVGEFLEDKCINPTFILDHPQIMSPLSKYHRDI 522
+ +LC + V+C PRTTARLLDKLVGE+LE I+PTF++ HPQIMSPL+K+HR I
Sbjct: 400 REVFDKLCRDNNVDCSAPRTTARLLDKLVGEYLESTFISPTFLIGHPQIMSPLAKWHRSI 459
Query: 523 PG 528
PG
Sbjct: 460 PG 461
Score = 81.0 bits (191), Expect = 5e-16
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = +2
Query: 2 LVVGGLDRVMKSEDSSRNEGIDLTHNPEFTTCEFYMAYADYNDLITIT 145
LVVGG+DRV + RNEGIDLTHNPEFTTCEFYMAYADY D+I +T
Sbjct: 286 LVVGGIDRVYEVGRLFRNEGIDLTHNPEFTTCEFYMAYADYEDVIQLT 333
>Z81497-3|CAB04081.2| 593|Caenorhabditis elegans Hypothetical
protein F10C2.6 protein.
Length = 593
Score = 35.1 bits (77), Expect = 0.031
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 2 LVVGGLDRVMKSEDSSRNEGIDLTHNPEFTTCEFYMAYADYNDLITITXNNVVXEW 169
L+VG +DR + R+EG PEFT + M++ N ++ + + ++ W
Sbjct: 221 LMVGAIDRYFQIARCYRDEGSKGDRQPEFTQVDVEMSFTTQNGVMQLIEDMIISAW 276
>AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical
protein Y111B2A.8 protein.
Length = 582
Score = 30.7 bits (66), Expect = 0.67
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 439 LEDKCINPTFILDHPQIMSPLSKYHRDIP 525
L+ K N T+IL H +IM LS Y RD+P
Sbjct: 337 LDRKTGNITYILTHKRIMKFLSLYMRDLP 365
>AL021474-6|CAI79259.1| 261|Caenorhabditis elegans Hypothetical
protein Y32F6A.6 protein.
Length = 261
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 166 MVKSIHGTYKVKYRPDGPSGEEVEIDFTPPFARV 267
+V SI ++ +KYR VEIDFTPPF R+
Sbjct: 193 LVYSIKRSFLIKYR-------SVEIDFTPPFKRL 219
>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 27.1 bits (57), Expect = 8.3
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = -2
Query: 440 RNSPTNLSRSRAVVLGGGHSTSCFSHNWLRRAFDSAVSS--VSGEGNFTFKIFSKLAIIG 267
R+SP SR +V ++ S+++L R ++AV+S +S + N KI++ LA+
Sbjct: 774 RHSPRMQSRLASV--SNSYNADFLSNDFLTR--NTAVTSHHISEKQN---KIYNALALAS 826
Query: 266 TLAKGGVKSISTSSPLGP 213
+ GG+ S SS L P
Sbjct: 827 VNSMGGLMDTSRSSMLTP 844
>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 27.1 bits (57), Expect = 8.3
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = -2
Query: 440 RNSPTNLSRSRAVVLGGGHSTSCFSHNWLRRAFDSAVSS--VSGEGNFTFKIFSKLAIIG 267
R+SP SR +V ++ S+++L R ++AV+S +S + N KI++ LA+
Sbjct: 774 RHSPRMQSRLASV--SNSYNADFLSNDFLTR--NTAVTSHHISEKQN---KIYNALALAS 826
Query: 266 TLAKGGVKSISTSSPLGP 213
+ GG+ S SS L P
Sbjct: 827 VNSMGGLMDTSRSSMLTP 844
>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 27.1 bits (57), Expect = 8.3
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = -2
Query: 440 RNSPTNLSRSRAVVLGGGHSTSCFSHNWLRRAFDSAVSS--VSGEGNFTFKIFSKLAIIG 267
R+SP SR +V ++ S+++L R ++AV+S +S + N KI++ LA+
Sbjct: 774 RHSPRMQSRLASV--SNSYNADFLSNDFLTR--NTAVTSHHISEKQN---KIYNALALAS 826
Query: 266 TLAKGGVKSISTSSPLGP 213
+ GG+ S SS L P
Sbjct: 827 VNSMGGLMDTSRSSMLTP 844
>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 27.1 bits (57), Expect = 8.3
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = -2
Query: 440 RNSPTNLSRSRAVVLGGGHSTSCFSHNWLRRAFDSAVSS--VSGEGNFTFKIFSKLAIIG 267
R+SP SR +V ++ S+++L R ++AV+S +S + N KI++ LA+
Sbjct: 774 RHSPRMQSRLASV--SNSYNADFLSNDFLTR--NTAVTSHHISEKQN---KIYNALALAS 826
Query: 266 TLAKGGVKSISTSSPLGP 213
+ GG+ S SS L P
Sbjct: 827 VNSMGGLMDTSRSSMLTP 844
>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 27.1 bits (57), Expect = 8.3
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = -2
Query: 440 RNSPTNLSRSRAVVLGGGHSTSCFSHNWLRRAFDSAVSS--VSGEGNFTFKIFSKLAIIG 267
R+SP SR +V ++ S+++L R ++AV+S +S + N KI++ LA+
Sbjct: 774 RHSPRMQSRLASV--SNSYNADFLSNDFLTR--NTAVTSHHISEKQN---KIYNALALAS 826
Query: 266 TLAKGGVKSISTSSPLGP 213
+ GG+ S SS L P
Sbjct: 827 VNSMGGLMDTSRSSMLTP 844
>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 27.1 bits (57), Expect = 8.3
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = -2
Query: 440 RNSPTNLSRSRAVVLGGGHSTSCFSHNWLRRAFDSAVSS--VSGEGNFTFKIFSKLAIIG 267
R+SP SR +V ++ S+++L R ++AV+S +S + N KI++ LA+
Sbjct: 774 RHSPRMQSRLASV--SNSYNADFLSNDFLTR--NTAVTSHHISEKQN---KIYNALALAS 826
Query: 266 TLAKGGVKSISTSSPLGP 213
+ GG+ S SS L P
Sbjct: 827 VNSMGGLMDTSRSSMLTP 844
>U56961-5|AAK39298.2| 156|Caenorhabditis elegans Hypothetical
protein T19D7.6 protein.
Length = 156
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1
Query: 102 NSQVVNSGLCVKSIPS 55
NS VV SGLC+ SIPS
Sbjct: 24 NSHVVLSGLCLTSIPS 39
>U39851-7|AAM81115.1| 668|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 2, isoform a
protein.
Length = 668
Score = 27.1 bits (57), Expect = 8.3
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -1
Query: 264 SCKRWSKINFNFFTTGTIWTVFDLVSTMNAFHH 166
+C + + N N+ + T W F+ V+++ HH
Sbjct: 358 TCDDFLRNNLNWVSKATNWNKFNAVASLGLIHH 390
>U39851-6|AAM81116.1| 965|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 2, isoform b
protein.
Length = 965
Score = 27.1 bits (57), Expect = 8.3
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -1
Query: 264 SCKRWSKINFNFFTTGTIWTVFDLVSTMNAFHH 166
+C + + N N+ + T W F+ V+++ HH
Sbjct: 358 TCDDFLRNNLNWVSKATNWNKFNAVASLGLIHH 390
>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
PLC210 protein.
Length = 1898
Score = 27.1 bits (57), Expect = 8.3
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = -2
Query: 440 RNSPTNLSRSRAVVLGGGHSTSCFSHNWLRRAFDSAVSS--VSGEGNFTFKIFSKLAIIG 267
R+SP SR +V ++ S+++L R ++AV+S +S + N KI++ LA+
Sbjct: 774 RHSPRMQSRLASV--SNSYNADFLSNDFLTR--NTAVTSHHISEKQN---KIYNALALAS 826
Query: 266 TLAKGGVKSISTSSPLGP 213
+ GG+ S SS L P
Sbjct: 827 VNSMGGLMDTSRSSMLTP 844
>AF039041-8|AAB94189.2| 448|Caenorhabditis elegans Hypothetical
protein W03F8.2 protein.
Length = 448
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 385 CPPPRTTARLLDKLVGEFLEDK--CINPTFILDHPQIMSPLSKYHRDI 522
C PPRT + D L+ + ++ C + TF L HP + H D+
Sbjct: 273 CEPPRTFESISD-LLNYYTKNHGGCASGTFQLKHPILQQSWEFMHSDV 319
>AF016444-1|AAN73876.2| 330|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 9 protein.
Length = 330
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = -1
Query: 279 SNHRDSCKRWSKINFNFFTTGTIWTVFDLVSTMNAF 172
S+++D C+ K++ +FF T+ +F L+S++ AF
Sbjct: 2 SSYQDHCQEMEKLSTSFFLRITL--IFQLLSSLVAF 35
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,828,435
Number of Sequences: 27780
Number of extensions: 269826
Number of successful extensions: 720
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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