Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_F15
(612 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 113 8e-26
03_01_0547 + 4093196-4093657,4094267-4095148 113 8e-26
03_01_0544 + 4082528-4082989,4083585-4084466 113 8e-26
03_01_0543 + 4076981-4077442,4078145-4079026 113 8e-26
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 36 0.033
05_03_0304 - 12000760-12001164,12001176-12001273,12004858-12005152 33 0.18
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 31 0.72
04_03_0895 + 20633554-20634480 31 0.95
02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,881... 31 0.95
02_03_0125 + 15529391-15529495,15530066-15530226,15530315-155305... 29 2.9
02_02_0065 + 6490490-6491552,6491754-6493601,6493857-6494236 29 2.9
03_05_0010 + 19622430-19622512,19622539-19623082,19623361-196237... 29 3.8
06_03_1311 - 29241884-29242054,29242802-29242879,29242968-292430... 28 5.1
06_03_0033 + 15719864-15720049,15720139-15720601,15720638-157212... 28 5.1
11_06_0596 + 25385744-25388890 28 6.7
07_01_1151 - 10822616-10823863 28 6.7
04_03_0891 - 20588648-20589100,20589188-20589397 28 6.7
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665 28 6.7
01_05_0261 - 20135258-20135725 28 6.7
11_04_0242 - 15273774-15274043,15274131-15274235 27 8.9
11_01_0169 - 1365984-1366681,1368669-1368745,1369133-1369257,136... 27 8.9
02_03_0034 - 14142518-14142923,14142935-14143269,14143976-141440... 27 8.9
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 113 bits (273), Expect = 8e-26
Identities = 46/74 (62%), Positives = 59/74 (79%)
Frame = -3
Query: 610 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSSKSGDAAIVNLVP 431
+NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK K+GDA +V ++P
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIP 394
Query: 430 SKPLCVESFQEFPP 389
+KP+ VE+F E+PP
Sbjct: 395 TKPMVVETFSEYPP 408
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/36 (66%), Positives = 24/36 (66%)
Frame = -1
Query: 432 PPSPCVWSPSRNSHPLGRFAVRDMRQTVAVGVIKAV 325
P P V PLGRFAVRDMRQTVAVGVIK V
Sbjct: 394 PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNV 429
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 113 bits (273), Expect = 8e-26
Identities = 46/74 (62%), Positives = 59/74 (79%)
Frame = -3
Query: 610 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSSKSGDAAIVNLVP 431
+NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK K+GDA +V ++P
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIP 394
Query: 430 SKPLCVESFQEFPP 389
+KP+ VE+F E+PP
Sbjct: 395 TKPMVVETFSEYPP 408
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/36 (66%), Positives = 24/36 (66%)
Frame = -1
Query: 432 PPSPCVWSPSRNSHPLGRFAVRDMRQTVAVGVIKAV 325
P P V PLGRFAVRDMRQTVAVGVIK V
Sbjct: 394 PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNV 429
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 113 bits (273), Expect = 8e-26
Identities = 46/74 (62%), Positives = 59/74 (79%)
Frame = -3
Query: 610 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSSKSGDAAIVNLVP 431
+NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK K+GDA +V ++P
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIP 394
Query: 430 SKPLCVESFQEFPP 389
+KP+ VE+F E+PP
Sbjct: 395 TKPMVVETFSEYPP 408
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/36 (66%), Positives = 24/36 (66%)
Frame = -1
Query: 432 PPSPCVWSPSRNSHPLGRFAVRDMRQTVAVGVIKAV 325
P P V PLGRFAVRDMRQTVAVGVIK V
Sbjct: 394 PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNV 429
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 113 bits (273), Expect = 8e-26
Identities = 46/74 (62%), Positives = 59/74 (79%)
Frame = -3
Query: 610 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSSKSGDAAIVNLVP 431
+NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK K+GDA +V ++P
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIP 394
Query: 430 SKPLCVESFQEFPP 389
+KP+ VE+F E+PP
Sbjct: 395 TKPMVVETFSEYPP 408
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/36 (66%), Positives = 24/36 (66%)
Frame = -1
Query: 432 PPSPCVWSPSRNSHPLGRFAVRDMRQTVAVGVIKAV 325
P P V PLGRFAVRDMRQTVAVGVIK V
Sbjct: 394 PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNV 429
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 35.5 bits (78), Expect = 0.033
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Frame = -3
Query: 583 GYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSSK-------SGDAAIVNLVPSK 425
GY VL H+ C+ ++ E++D + K + K K +G + + +
Sbjct: 337 GYKAVLHIHSVVEECEIVDLIEEIDMKKKKEADPKKKKPKRKPLFVKNGAVVVCRIQVNN 396
Query: 424 PLCVESFQEFP 392
+C+E+F +FP
Sbjct: 397 LICIENFSDFP 407
>05_03_0304 - 12000760-12001164,12001176-12001273,12004858-12005152
Length = 265
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -1
Query: 453 PPLSTWFPPSPCVWSPSRNSHPLGRFAVRDMRQTVAVGVIK 331
PP+S+ PPSPC W S LG R V G I+
Sbjct: 175 PPISSGMPPSPCEWRLSSTRWDLGEITRRMNTLDVQTGEIQ 215
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = -3
Query: 547 IACKFAEIKEKVDRRTGKSTEDNPKSSKSGDAAIVNLVPSKPLCVESF 404
++ +I ++++TGK+++ P+ S A++ + K +CVE F
Sbjct: 577 VSASMVKILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEKEVCVEEF 624
>04_03_0895 + 20633554-20634480
Length = 308
Score = 30.7 bits (66), Expect = 0.95
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 266 PLVAFSAALVTLPPPASLKFTAFITPTATVCLMSRTAKRPRGWEFLEGLH-TQGLGGNQV 442
P++ +AA PP L +A ++P A + + R+ RP E + T G GG V
Sbjct: 130 PMMDEAAAQQFFPPELLLSPSAAMSPAARLATIERSV-RPMPEPAPEYVDITNGGGGGGV 188
Query: 443 DNGGITRFTG 472
D+GG+ G
Sbjct: 189 DDGGLAAILG 198
>02_02_0307 -
8809724-8811589,8811681-8811762,8812130-8812242,
8812361-8812492,8812681-8812864,8813002-8813135,
8813552-8813656,8813738-8813839,8813930-8814022,
8814136-8814456,8814595-8814696,8814791-8814853,
8815213-8815708,8815964-8816124,8816213-8816743,
8817077-8817118,8817203-8817334,8817639-8817703,
8817858-8818169,8818262-8818334,8818425-8818517,
8819440-8819501,8819740-8819809
Length = 1777
Score = 30.7 bits (66), Expect = 0.95
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -3
Query: 529 EIKEKVDRRTGK--STEDNPKSSKSGDAAIVNLVPSKPLCVESFQEFPPPRSFRR 371
EIK+K D ++GK ST++N S+ + DA VN +K Q + P +F+R
Sbjct: 615 EIKKKTDEKSGKGASTKEN-TSTNTNDAQTVNSSSTKEDNEAILQRWLPEAAFQR 668
>02_03_0125 +
15529391-15529495,15530066-15530226,15530315-15530570,
15531360-15531374,15533608-15533967
Length = 298
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -3
Query: 349 RRRCNKGCELQGSRWWQSHQSCRKSHQGQEVASTVNSS 236
RRRC+K L+ R W++ C G+ V + N++
Sbjct: 102 RRRCSKSVALRDLRLWEASTMCALLSVGERVRRSSNTA 139
>02_02_0065 + 6490490-6491552,6491754-6493601,6493857-6494236
Length = 1096
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = -1
Query: 528 KSKRKSTVVLVNQQRTTLNPVNLVMPPLSTWFPPSPCVWSPSRNSHPLGRFAVRDMRQTV 349
K++ KS + L+N ++ V LV + F P + S S GR ++D TV
Sbjct: 753 KTQAKSDLALINDSHLRVSYVELVNA--TNVFAPDNLIGVGSFGSVYKGRMTIQDQEVTV 810
Query: 348 AVGVI 334
AV V+
Sbjct: 811 AVKVL 815
>03_05_0010 +
19622430-19622512,19622539-19623082,19623361-19623767,
19623831-19624167,19624290-19624508,19625522-19625826,
19626128-19626287,19626422-19626547
Length = 726
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 526 IKEKVDRRTGKSTEDNPKSSKSGDAAIVNLVPS 428
IKE + R GKST D P + +G I PS
Sbjct: 207 IKEAITTRGGKSTRDPPYPNPTGTNGIAREAPS 239
>06_03_1311 -
29241884-29242054,29242802-29242879,29242968-29243049,
29243141-29243212,29243316-29243437,29243541-29243596,
29244264-29244333,29244435-29244518,29244599-29244667,
29244855-29244928,29245014-29245125,29245220-29245510
Length = 426
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 531 PKSKRKSTVVLVNQQRTTLNPVNLVMP 451
P+ R+S + Q TT++P NLV+P
Sbjct: 103 PRRNRRSPALRAAFQETTISPANLVLP 129
>06_03_0033 +
15719864-15720049,15720139-15720601,15720638-15721254,
15721300-15721869,15723625-15724140
Length = 783
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -1
Query: 453 PPLSTWFPPSPCVWSPSRNSHPLGRFAVRDMRQTVAVGVIK 331
PP S+ PPSP W S + LG R V G I+
Sbjct: 693 PPRSSDVPPSPSEWRSSSSRWDLGEITRRSDTLDVQTGEIQ 733
>11_06_0596 + 25385744-25388890
Length = 1048
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -1
Query: 528 KSKRKSTVVLVNQQRTTLNPVNLVMPPLSTWFPPSPCVWSPSRNSHPLGRFAVRD 364
K+ K +N+ TTL +++ M P+S+W + +P L VRD
Sbjct: 832 KANLKDLFAQINKLHTTLRSLSIRMKPVSSWGSTEAVLMTPPLLLESLRICGVRD 886
>07_01_1151 - 10822616-10823863
Length = 415
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/89 (19%), Positives = 35/89 (39%)
Frame = -3
Query: 604 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSSKSGDAAIVNLVPSK 425
H GQ S G P + A + + R+ S ++ + K+G+ ++ P
Sbjct: 319 HTGQASGG--PKIQSDVQPNASRSTNQSDSRKRKLVSSDDEGDDAEKTGNKGVIGKQPKS 376
Query: 424 PLCVESFQEFPPPRSFRRA*HEADGRRRC 338
+ P P+ ++ + + + G RC
Sbjct: 377 TNPKKKTSSHPMPKIWKSSRYVSSGNFRC 405
>04_03_0891 - 20588648-20589100,20589188-20589397
Length = 220
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -1
Query: 417 VWSP--SRNSHPLGRFAVRDMRQTVAVGVI 334
VWSP S S P+G++ MRQ +A G +
Sbjct: 118 VWSPVMSGESVPVGQYVADAMRQDIAAGYV 147
>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
Length = 727
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 239 LSFIYNCDTSFTERCSEGKKGYKLIPFLYFLHGLYCNI 126
L + SF E+C+ GK L+ L+ + +YCN+
Sbjct: 226 LKYALRATKSF-EKCAGGKPSLNLVMSLHVVAAIYCNL 262
>01_05_0261 - 20135258-20135725
Length = 155
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -1
Query: 453 PPLSTWFPPSPCVWSPSRNSHPLGRFAVRDMRQTVAVGVIK 331
PP S+ PPSP W S + LG R V G I+
Sbjct: 65 PPRSSGVPPSPSEWRSSSSRWDLGEITRRMDTLDVQTGEIQ 105
>11_04_0242 - 15273774-15274043,15274131-15274235
Length = 124
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 532 QICRLCGLCGNPIQVCI 582
QIC +C CG P VCI
Sbjct: 74 QICAVCTCCGGPHGVCI 90
>11_01_0169 -
1365984-1366681,1368669-1368745,1369133-1369257,
1369338-1369426,1370041-1370126,1370705-1370970
Length = 446
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 389 GWEFL-EGLHTQGLGGNQVDNGGITRFTGF 475
G E+L EG + GGN +DN G+T + F
Sbjct: 365 GMEYLFEGCSSITEGGNSMDNSGVTEYNLF 394
>02_03_0034 -
14142518-14142923,14142935-14143269,14143976-14144068,
14144704-14145674,14145714-14145812,14146011-14146488,
14146717-14146929
Length = 864
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 453 PPLSTWFPPSPCVWSPSRNSHPLGRFAVR 367
PP S+ PPSP W S + LG R
Sbjct: 774 PPRSSGVPPSPSEWRSSSSRWDLGEITKR 802
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,486,443
Number of Sequences: 37544
Number of extensions: 396581
Number of successful extensions: 1296
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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