Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_F15
(612 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 134 6e-32
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 134 6e-32
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 134 6e-32
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 35 0.053
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p... 32 0.28
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p... 32 0.28
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p... 32 0.28
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr... 32 0.28
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase... 32 0.28
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 31 0.65
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 30 1.5
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 30 1.5
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 29 2.6
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 29 2.6
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 29 2.6
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 29 2.6
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 29 2.6
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 29 2.6
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 29 2.6
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 29 2.6
Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical p... 28 4.6
Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical pr... 28 4.6
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 4.6
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 4.6
AC024806-2|AAK84613.1| 433|Caenorhabditis elegans Hypothetical ... 28 4.6
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 4.6
Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical p... 27 8.0
Z46267-4|CAD45594.1| 517|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical pr... 27 8.0
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 134 bits (323), Expect = 6e-32
Identities = 58/74 (78%), Positives = 64/74 (86%)
Frame = -3
Query: 610 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSSKSGDAAIVNLVP 431
+NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK KSGDA IV L+P
Sbjct: 313 MNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIP 372
Query: 430 SKPLCVESFQEFPP 389
+KPLCVESF ++ P
Sbjct: 373 TKPLCVESFTDYAP 386
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -1
Query: 432 PPSPCVWSPSRNSHPLGRFAVRDMRQTVAVGVIKAV 325
P P + PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 372 PTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 407
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 134 bits (323), Expect = 6e-32
Identities = 58/74 (78%), Positives = 64/74 (86%)
Frame = -3
Query: 610 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSSKSGDAAIVNLVP 431
+NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK KSGDA IV L+P
Sbjct: 347 MNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIP 406
Query: 430 SKPLCVESFQEFPP 389
+KPLCVESF ++ P
Sbjct: 407 TKPLCVESFTDYAP 420
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -1
Query: 432 PPSPCVWSPSRNSHPLGRFAVRDMRQTVAVGVIKAV 325
P P + PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 406 PTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 441
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 134 bits (323), Expect = 6e-32
Identities = 58/74 (78%), Positives = 64/74 (86%)
Frame = -3
Query: 610 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSSKSGDAAIVNLVP 431
+NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK KSGDA IV L+P
Sbjct: 347 MNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIP 406
Query: 430 SKPLCVESFQEFPP 389
+KPLCVESF ++ P
Sbjct: 407 TKPLCVESFTDYAP 420
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -1
Query: 432 PPSPCVWSPSRNSHPLGRFAVRDMRQTVAVGVIKAV 325
P P + PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 406 PTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 441
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 34.7 bits (76), Expect = 0.053
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = -3
Query: 610 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSSKSGDAAIVNLVP 431
L H I++GY+ VL +A + +D++TG+ + K K + I+ L
Sbjct: 438 LEHRSIIASGYSCVLHIQSAVEEVTVKGVIATIDKKTGE--KKRAKFVKQDEKCIMRLES 495
Query: 430 SKPLCVESFQEFP 392
+P +E F+E+P
Sbjct: 496 PEPFVLEPFKEYP 508
Score = 31.9 bits (69), Expect = 0.37
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 429 PSPCVWSPSRNSHPLGRFAVRDMRQTVAVG-VIKAV 325
P P V P + LGRF +RD +T+A+G V+K V
Sbjct: 496 PEPFVLEPFKEYPYLGRFTLRDEGKTIAIGKVLKVV 531
>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 32.3 bits (70), Expect = 0.28
Identities = 26/102 (25%), Positives = 51/102 (50%)
Frame = -3
Query: 523 KEKVDRRTGKSTEDNPKSSKSGDAAIVNLVPSKPLCVESFQEFPPPRSFRRA*HEADGRR 344
+E+V R+ K ED+PK+SK + + N+ LC + E P S + + + R+
Sbjct: 1121 QEEVQVRSEK--EDSPKTSKRAEKSARNIKQQDSLCSDHSVEQAKP-STSKTTSKTNDRK 1177
Query: 343 RCNKGCELQGSRWWQSHQSCRKSHQGQEVASTVNSSVLYTTA 218
++ Q ++ +Q RK++ G ++A ++ V+Y A
Sbjct: 1178 TEDEVLYAQLAQNAIRNQQPRKNNTGVQIAPELSDIVIYMQA 1219
>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 32.3 bits (70), Expect = 0.28
Identities = 26/102 (25%), Positives = 51/102 (50%)
Frame = -3
Query: 523 KEKVDRRTGKSTEDNPKSSKSGDAAIVNLVPSKPLCVESFQEFPPPRSFRRA*HEADGRR 344
+E+V R+ K ED+PK+SK + + N+ LC + E P S + + + R+
Sbjct: 1121 QEEVQVRSEK--EDSPKTSKRAEKSARNIKQQDSLCSDHSVEQAKP-STSKTTSKTNDRK 1177
Query: 343 RCNKGCELQGSRWWQSHQSCRKSHQGQEVASTVNSSVLYTTA 218
++ Q ++ +Q RK++ G ++A ++ V+Y A
Sbjct: 1178 TEDEVLYAQLAQNAIRNQQPRKNNTGVQIAPELSDIVIYMQA 1219
>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 32.3 bits (70), Expect = 0.28
Identities = 26/102 (25%), Positives = 51/102 (50%)
Frame = -3
Query: 523 KEKVDRRTGKSTEDNPKSSKSGDAAIVNLVPSKPLCVESFQEFPPPRSFRRA*HEADGRR 344
+E+V R+ K ED+PK+SK + + N+ LC + E P S + + + R+
Sbjct: 1121 QEEVQVRSEK--EDSPKTSKRAEKSARNIKQQDSLCSDHSVEQAKP-STSKTTSKTNDRK 1177
Query: 343 RCNKGCELQGSRWWQSHQSCRKSHQGQEVASTVNSSVLYTTA 218
++ Q ++ +Q RK++ G ++A ++ V+Y A
Sbjct: 1178 TEDEVLYAQLAQNAIRNQQPRKNNTGVQIAPELSDIVIYMQA 1219
>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical protein
F31B12.1c protein.
Length = 1895
Score = 32.3 bits (70), Expect = 0.28
Identities = 26/102 (25%), Positives = 51/102 (50%)
Frame = -3
Query: 523 KEKVDRRTGKSTEDNPKSSKSGDAAIVNLVPSKPLCVESFQEFPPPRSFRRA*HEADGRR 344
+E+V R+ K ED+PK+SK + + N+ LC + E P S + + + R+
Sbjct: 1121 QEEVQVRSEK--EDSPKTSKRAEKSARNIKQQDSLCSDHSVEQAKP-STSKTTSKTNDRK 1177
Query: 343 RCNKGCELQGSRWWQSHQSCRKSHQGQEVASTVNSSVLYTTA 218
++ Q ++ +Q RK++ G ++A ++ V+Y A
Sbjct: 1178 TEDEVLYAQLAQNAIRNQQPRKNNTGVQIAPELSDIVIYMQA 1219
>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical protein
F31B12.1b protein.
Length = 1868
Score = 32.3 bits (70), Expect = 0.28
Identities = 26/102 (25%), Positives = 51/102 (50%)
Frame = -3
Query: 523 KEKVDRRTGKSTEDNPKSSKSGDAAIVNLVPSKPLCVESFQEFPPPRSFRRA*HEADGRR 344
+E+V R+ K ED+PK+SK + + N+ LC + E P S + + + R+
Sbjct: 1121 QEEVQVRSEK--EDSPKTSKRAEKSARNIKQQDSLCSDHSVEQAKP-STSKTTSKTNDRK 1177
Query: 343 RCNKGCELQGSRWWQSHQSCRKSHQGQEVASTVNSSVLYTTA 218
++ Q ++ +Q RK++ G ++A ++ V+Y A
Sbjct: 1178 TEDEVLYAQLAQNAIRNQQPRKNNTGVQIAPELSDIVIYMQA 1219
>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical protein
F31B12.1a protein.
Length = 1898
Score = 32.3 bits (70), Expect = 0.28
Identities = 26/102 (25%), Positives = 51/102 (50%)
Frame = -3
Query: 523 KEKVDRRTGKSTEDNPKSSKSGDAAIVNLVPSKPLCVESFQEFPPPRSFRRA*HEADGRR 344
+E+V R+ K ED+PK+SK + + N+ LC + E P S + + + R+
Sbjct: 1121 QEEVQVRSEK--EDSPKTSKRAEKSARNIKQQDSLCSDHSVEQAKP-STSKTTSKTNDRK 1177
Query: 343 RCNKGCELQGSRWWQSHQSCRKSHQGQEVASTVNSSVLYTTA 218
++ Q ++ +Q RK++ G ++A ++ V+Y A
Sbjct: 1178 TEDEVLYAQLAQNAIRNQQPRKNNTGVQIAPELSDIVIYMQA 1219
>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
PLC210 protein.
Length = 1898
Score = 32.3 bits (70), Expect = 0.28
Identities = 26/102 (25%), Positives = 51/102 (50%)
Frame = -3
Query: 523 KEKVDRRTGKSTEDNPKSSKSGDAAIVNLVPSKPLCVESFQEFPPPRSFRRA*HEADGRR 344
+E+V R+ K ED+PK+SK + + N+ LC + E P S + + + R+
Sbjct: 1121 QEEVQVRSEK--EDSPKTSKRAEKSARNIKQQDSLCSDHSVEQAKP-STSKTTSKTNDRK 1177
Query: 343 RCNKGCELQGSRWWQSHQSCRKSHQGQEVASTVNSSVLYTTA 218
++ Q ++ +Q RK++ G ++A ++ V+Y A
Sbjct: 1178 TEDEVLYAQLAQNAIRNQQPRKNNTGVQIAPELSDIVIYMQA 1219
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 31.1 bits (67), Expect = 0.65
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -3
Query: 313 SRWWQSHQSCRKSHQGQEVASTVNSSVLYTTAILHSPKGVQKERRATN 170
SR+ H S S G EV S +SS+ +T L+S K ++ RRA N
Sbjct: 3717 SRFLNMHNSGSDSDSGSEVRSDSSSSLGGSTESLNSSKKGKRARRAMN 3764
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 566 GLPHSPHSLQICRNQRESRPSYW*INR 486
GL HSPHS N R S P ++ INR
Sbjct: 47 GLVHSPHSSFTTENLRSSDPMFFDINR 73
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 534 LPKSKRKSTVVLVNQQRTTLNPVNLVMPPLSTWFPPSPCVWS 409
LPK+ T V + TT+ P +PP +T PP +S
Sbjct: 264 LPKTTVAPTTTTVPRTTTTVPPTTTTVPPTTTTVPPITTTYS 305
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -3
Query: 331 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 158
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 493 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 551
Query: 157 Y 155
Y
Sbjct: 552 Y 552
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -3
Query: 331 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 158
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 707 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 765
Query: 157 Y 155
Y
Sbjct: 766 Y 766
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -3
Query: 331 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 158
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 843 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 901
Query: 157 Y 155
Y
Sbjct: 902 Y 902
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -3
Query: 331 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 158
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 892 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 950
Query: 157 Y 155
Y
Sbjct: 951 Y 951
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -3
Query: 331 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 158
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 892 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 950
Query: 157 Y 155
Y
Sbjct: 951 Y 951
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -3
Query: 331 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 158
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 884 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 942
Query: 157 Y 155
Y
Sbjct: 943 Y 943
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -3
Query: 331 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 158
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 895 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 953
Query: 157 Y 155
Y
Sbjct: 954 Y 954
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -3
Query: 331 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 158
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 896 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 954
Query: 157 Y 155
Y
Sbjct: 955 Y 955
>Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical
protein C25F9.13 protein.
Length = 224
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -1
Query: 507 VVLVNQQRTTLNPVNLVMPPLSTWFPPSPCVWSPSRNSHP 388
++L++ T + L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFLNLKLSIVPSTKWRPPSSCTMYPANSTFP 188
>Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical
protein C25F9.1 protein.
Length = 431
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -1
Query: 507 VVLVNQQRTTLNPVNLVMPPLSTWFPPSPCVWSPSRNSHP 388
++L++ T + L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFFNLKLEIVPSTKWRPPSSCTMYPANSTFP 188
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 568 LDCHTAHIACKFAEIKEKVDRRTGKSTE 485
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 568 LDCHTAHIACKFAEIKEKVDRRTGKSTE 485
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AC024806-2|AAK84613.1| 433|Caenorhabditis elegans Hypothetical
protein Y52E8A.4 protein.
Length = 433
Score = 28.3 bits (60), Expect = 4.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -2
Query: 137 YCNIIFNLYKVIHTPQMFCY 78
+C N +K++ TP+MFC+
Sbjct: 211 FCETFVNSFKLLKTPRMFCF 230
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 568 LDCHTAHIACKFAEIKEKVDRRTGKSTE 485
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical
protein F49E2.2c protein.
Length = 576
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -3
Query: 559 HTAHIACKFAEIKEKVDRRTGKSTEDNPKSSKSGDAAIVNLVPS 428
H A +A + EIKE V+++ ++ +D+ +S S A + +PS
Sbjct: 282 HAAVVAAE--EIKENVEKKVDEAVQDSRSNSTSSVATTLEDLPS 323
>Z46267-4|CAD45594.1| 517|Caenorhabditis elegans Hypothetical
protein F49E2.2b protein.
Length = 517
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -3
Query: 559 HTAHIACKFAEIKEKVDRRTGKSTEDNPKSSKSGDAAIVNLVPS 428
H A +A + EIKE V+++ ++ +D+ +S S A + +PS
Sbjct: 228 HAAVVAAE--EIKENVEKKVDEAVQDSRSNSTSSVATTLEDLPS 269
>Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical
protein F49E2.2a protein.
Length = 522
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -3
Query: 559 HTAHIACKFAEIKEKVDRRTGKSTEDNPKSSKSGDAAIVNLVPS 428
H A +A + EIKE V+++ ++ +D+ +S S A + +PS
Sbjct: 228 HAAVVAAE--EIKENVEKKVDEAVQDSRSNSTSSVATTLEDLPS 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,795,374
Number of Sequences: 27780
Number of extensions: 336267
Number of successful extensions: 1024
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -